RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 HTR7P34969 479 aa16.2■□□□□ 0.18
SNX13-204ENST00000444712 SERPINB6P35237 376 aa16.2■□□□□ 0.18
SNX13-204ENST00000444712 GEMIN4P57678 1058 aaKnown RBP16.2■□□□□ 0.18
SNX13-204ENST00000444712 CDK16Q00536 496 aa16.2■□□□□ 0.18
SNX13-204ENST00000444712 ELAVL2Q12926 359 aaKnown RBP16.2■□□□□ 0.18
SNX13-204ENST00000444712 NLRP14Q86W24 1093 aa16.2■□□□□ 0.18
SNX13-204ENST00000444712 SPATS2Q86XZ4 545 aaKnown RBP16.2■□□□□ 0.18
SNX13-204ENST00000444712 ANKMY2Q8IV38 441 aa16.2■□□□□ 0.18
SNX13-204ENST00000444712 XPO6Q96QU8 1125 aaKnown RBP16.2■□□□□ 0.18
SNX13-204ENST00000444712 PPANQ9NQ55 473 aaKnown RBP16.2■□□□□ 0.18
SNX13-204ENST00000444712 PSMC3IPQ9P2W1 217 aaPredicted RBP16.2■□□□□ 0.18
SNX13-204ENST00000444712 VWA8A3KMH1 1905 aa16.2■□□□□ 0.18
SNX13-204ENST00000444712 A0A0A0MRY4 1105 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 OR6C75A6NL08 312 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 DCLK1O15075 740 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 OPHN1O60890 802 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 GSTA2P09210 222 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 RABGGTBP53611 331 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 SLC5A3P53794 718 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 HNRNPH2P55795 449 aaKnown RBP16.19■□□□□ 0.18
SNX13-204ENST00000444712 YWHAGP61981 247 aaKnown RBP eCLIP16.19■□□□□ 0.18
SNX13-204ENST00000444712 PRKD1Q15139 912 aaPredicted RBP16.19■□□□□ 0.18
SNX13-204ENST00000444712 SLC39A12Q504Y0 691 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 BRMS1LQ5PSV4 323 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 BTBD8Q5XKL5 378 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 B4GALNT4Q76KP1 1039 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 DBF4BQ8NFT6 615 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 CCDC110Q8TBZ0 833 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 SPATA13Q96N96 652 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 OXCT2Q9BYC2 517 aaPredicted RBP16.19■□□□□ 0.18
SNX13-204ENST00000444712 CCDC134Q9H6E4 229 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 ACSS3Q9H6R3 686 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 PAK6Q9NQU5 681 aaPredicted RBP16.19■□□□□ 0.18
SNX13-204ENST00000444712 ADAM28Q9UKQ2 775 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 CLUHO75153 1309 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 EBAG9O00559 213 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 MAP3K6O95382 1288 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 MAGEA11P43364 429 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 SEMA5AQ13591 1074 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 TMED2Q15363 201 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 ZNF280DQ6N043 979 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 C3orf62Q6ZUJ4 267 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 ARHGAP18Q8N392 663 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 TAB3Q8N5C8 712 aaPredicted RBP16.19■□□□□ 0.18
SNX13-204ENST00000444712 SH3TC2Q8TF17 1288 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 EDEM1Q92611 657 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 C8orf48Q96LL4 319 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 TMEM175Q9BSA9 504 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 MAGEB5Q9BZ81 275 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 UNC93B1Q9H1C4 597 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 FBXO44Q9H4M3 255 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 ETNK1Q9HBU6 452 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 XAB2Q9HCS7 855 aaKnown RBP16.19■□□□□ 0.18
SNX13-204ENST00000444712 CTNNAL1Q9UBT7 734 aa16.19■□□□□ 0.18
SNX13-204ENST00000444712 PRG3Q9Y2Y8 225 aaPredicted RBP16.19■□□□□ 0.18
SNX13-204ENST00000444712 TTC3P53804 2025 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 POC1B-GALNT4F8VUJ3 575 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 MTSS1O43312 755 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 B4GALT3O60512 393 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 IGLV3-25P01717 112 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 ALDH2P05091 517 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 APRTP07741 180 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 MX2P20592 715 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 GPX6P59796 221 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 SMARCB1Q12824 385 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 MSS51Q4VC12 460 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 HP1BP3Q5SSJ5 553 aaPredicted RBP16.18■□□□□ 0.18
SNX13-204ENST00000444712 TAC4Q86UU9 113 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 ADAM32Q8TC27 787 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 DQX1Q8TE96 717 aaKnown RBP16.18■□□□□ 0.18
SNX13-204ENST00000444712 RNF34Q969K3 372 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 CCT8L2Q96SF2 557 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 TKTL2Q9H0I9 626 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 OSBPL2Q9H1P3 480 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 EIF2B3Q9NR50 452 aaKnown RBP16.18■□□□□ 0.18
SNX13-204ENST00000444712 DNAJB4Q9UDY4 337 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 RABGEF1Q9UJ41 708 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 PCDHB5Q9Y5E4 795 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 TEX264Q9Y6I9 313 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 FNDC1Q4ZHG4 1894 aaPredicted RBP16.18■□□□□ 0.18
SNX13-204ENST00000444712 RASA4BC9J798 803 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 F8W810 466 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 TNFRSF10BO14763 440 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 RASA4O43374 803 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 BRAFP15056 766 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 ERCC2P18074 760 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 STX2P32856 288 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 NRLP54845 237 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 GAD2Q05329 585 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 ANKRD20A2Q5SQ80 823 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 VARS2Q5ST30 1063 aaKnown RBP16.18■□□□□ 0.18
SNX13-204ENST00000444712 ANKRD20A1Q5TYW2 823 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 ANKRD20A3Q5VUR7 823 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 NPAS4Q8IUM7 802 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 MAML1Q92585 1016 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 CASD1Q96PB1 797 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 CYTH2Q99418 400 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 SMOC2Q9H3U7 446 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 ABI2Q9NYB9 513 aaPredicted RBP16.18■□□□□ 0.18
SNX13-204ENST00000444712 TBK1Q9UHD2 729 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms