RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 ZDHHC12Q96GR4 267 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 MSANTD3Q96H12 275 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 ART5Q96L15 291 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 SNX22Q96L94 193 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 UHRF1Q96T88 793 aaPredicted RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 KIFC3Q9BVG8 833 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 ABCG8Q9H221 673 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 CDIP1Q9H305 208 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 HAUS4Q9H6D7 363 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 NOD2Q9HC29 1040 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 TAS2R10Q9NYW0 307 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 SCOCQ9UIL1 159 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 ANAPC2Q9UJX6 822 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 PADI1Q9ULC6 663 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 DNAJC16Q9Y2G8 782 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 HS3ST4Q9Y661 456 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 POMT1Q9Y6A1 747 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 GRIN2BQ13224 1484 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 HEATR9A2RTY3 570 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 AHRRA9YTQ3 701 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 ZNF561-AS1K7EIQ3 104 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 RIMBP2O15034 1052 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 WDR46O15213 610 aaKnown RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 BUB1O43683 1085 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 DIRAS3O95661 229 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 ADH1BP00325 375 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 BSGP35613 385 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 GATA4P43694 442 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 AFF1P51825 1210 aaKnown RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 MFAP3P55082 362 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 MRPS15P82914 257 aaKnown RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 PRKCEQ02156 737 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 INSCQ1MX18 579 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 PITRM1Q5JRX3 1037 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 RNFT1Q5M7Z0 435 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 TMEM270Q6UE05 265 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 NHLRC1Q6VVB1 395 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 RBPMS2Q6ZRY4 209 aaKnown RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 KIAA0408Q6ZU52 694 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 LAPTM4BQ86VI4 370 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 RNF10Q8N5U6 811 aaKnown RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 POMGNT2Q8NAT1 580 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 COPS5Q92905 334 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 GCNAQ96QF7 691 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 CTAGE1Q96RT6 745 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 RBM15Q96T37 977 aaKnown RBP eCLIP4.11□□□□□ -1.75
UBR3-206ENST00000444475 POP1Q99575 1024 aaKnown RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 PUS3Q9BZE2 481 aaKnown RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 HIPK3Q9H422 1215 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 TFB2MQ9H5Q4 396 aaKnown RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 SLC35C2Q9NQQ7 365 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 AFF4Q9UHB7 1163 aaKnown RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 PTPRTO14522 1441 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 NUP160Q12769 1436 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 OR6C76A6NM76 312 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 E9PBE3 544 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 ZW10O43264 779 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 NUDT21O43809 227 aaKnown RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 IL1AP01583 271 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 LMNAP02545 664 aaKnown RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 RALAP11233 206 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 CYP19A1P11511 503 aaPredicted RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 MYL4P12829 197 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 IL1R1P14778 569 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 CHRM3P20309 590 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 GCH1P30793 250 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 RPS6KA3P51812 740 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 ADCY7P51828 1080 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 NPEPPSP55786 919 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 YBX1P67809 324 aaKnown RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 MYO1EQ12965 1108 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 TUBB3Q13509 450 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 RFTN1Q14699 578 aaPredicted RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 HSP90AA5PQ58FG0 334 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 WIPI1Q5MNZ9 446 aaPredicted RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 PPP1R26Q5T8A7 1209 aaPredicted RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 TTC22Q5TAA0 569 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 ZNF697Q5TEC3 545 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 HEPHL1Q6MZM0 1159 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 SLC36A4Q6YBV0 504 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 MIGA2Q7L4E1 593 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 VASH1Q7L8A9 365 aaPredicted RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 PLEKHH3Q7Z736 793 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 BBS5Q8N3I7 341 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 RASGEF1CQ8N431 466 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 GLB1L3Q8NCI6 653 aaPredicted RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 OR6S1Q8NH40 331 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 SLC26A7Q8TE54 656 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 MYRFLQ96LU7 910 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 POLR1EQ9GZS1 481 aaKnown RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 GPR27Q9NS67 375 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 AJAP1Q9UKB5 411 aaPredicted RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 MRPS2Q9Y399 296 aaKnown RBP4.11□□□□□ -1.75
UBR3-206ENST00000444475 CAPN7Q9Y6W3 813 aa4.11□□□□□ -1.75
UBR3-206ENST00000444475 MROH2BQ7Z745 1585 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 A0A0A0MRY4 1105 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 HSBP1L1C9JCN9 74 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 PIP5K1BO14986 540 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 MMP20O60882 483 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 ANXA2P07355 339 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms