RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 CDK5RAP1Q96SZ6 601 aaKnown RBP21.74■■□□□ 1.07
POLR2J3-202ENST00000443430 NT5C1AQ9BXI3 368 aa21.74■■□□□ 1.07
POLR2J3-202ENST00000443430 SLC2A11Q9BYW1 496 aa21.74■■□□□ 1.07
POLR2J3-202ENST00000443430 LHX5Q9H2C1 402 aa21.74■■□□□ 1.07
POLR2J3-202ENST00000443430 ZSCAN16Q9H4T2 348 aaPredicted RBP21.74■■□□□ 1.07
POLR2J3-202ENST00000443430 H0Y8X5 98 aa21.73■■□□□ 1.07
POLR2J3-202ENST00000443430 DHRS13Q6UX07 377 aa21.73■■□□□ 1.07
POLR2J3-202ENST00000443430 LAYNQ6UX15 382 aa21.73■■□□□ 1.07
POLR2J3-202ENST00000443430 DDI1Q8WTU0 396 aa21.73■■□□□ 1.07
POLR2J3-202ENST00000443430 TMEM174Q8WUU8 243 aa21.73■■□□□ 1.07
POLR2J3-202ENST00000443430 BIRC7Q96CA5 298 aa21.73■■□□□ 1.07
POLR2J3-202ENST00000443430 DUSP16Q9BY84 665 aa21.73■■□□□ 1.07
POLR2J3-202ENST00000443430 UPF2Q9HAU5 1272 aaKnown RBP21.73■■□□□ 1.07
POLR2J3-202ENST00000443430 MAGEF1Q9HAY2 307 aa21.73■■□□□ 1.07
POLR2J3-202ENST00000443430 KIF20AO95235 890 aa21.72■■□□□ 1.07
POLR2J3-202ENST00000443430 HLA-DRAP01903 254 aa21.72■■□□□ 1.07
POLR2J3-202ENST00000443430 CCT8P50990 548 aa21.72■■□□□ 1.07
POLR2J3-202ENST00000443430 CUL4BQ13620 913 aa21.72■■□□□ 1.07
POLR2J3-202ENST00000443430 KCNT1Q5JUK3 1230 aa21.72■■□□□ 1.07
POLR2J3-202ENST00000443430 C1orf220Q5T0J3 134 aa21.72■■□□□ 1.07
POLR2J3-202ENST00000443430 PPP1R26Q5T8A7 1209 aaPredicted RBP21.72■■□□□ 1.07
POLR2J3-202ENST00000443430 FAM217AQ8IXS0 508 aa21.72■■□□□ 1.07
POLR2J3-202ENST00000443430 TMC2Q8TDI7 906 aa21.72■■□□□ 1.07
POLR2J3-202ENST00000443430 DCBLD2Q96PD2 775 aa21.72■■□□□ 1.07
POLR2J3-202ENST00000443430 UBL7Q96S82 380 aaPredicted RBP21.72■■□□□ 1.07
POLR2J3-202ENST00000443430 BACH2Q9BYV9 841 aa21.72■■□□□ 1.07
POLR2J3-202ENST00000443430 TMEM245Q9H330 911 aa21.72■■□□□ 1.07
POLR2J3-202ENST00000443430 MARCH2Q9P0N8 246 aa21.72■■□□□ 1.07
POLR2J3-202ENST00000443430 ASH1LQ9NR48 2969 aaKnown RBP21.71■■□□□ 1.07
POLR2J3-202ENST00000443430 TP53BP1Q12888 1972 aaPredicted RBP21.71■■□□□ 1.07
POLR2J3-202ENST00000443430 E9PAM4 449 aa21.71■■□□□ 1.07
POLR2J3-202ENST00000443430 IKBKBO14920 756 aa21.71■■□□□ 1.07
POLR2J3-202ENST00000443430 POLR2DO15514 142 aaKnown RBP21.71■■□□□ 1.07
POLR2J3-202ENST00000443430 TSPAN3O60637 253 aa21.71■■□□□ 1.07
POLR2J3-202ENST00000443430 CUTAO60888 179 aa21.71■■□□□ 1.07
POLR2J3-202ENST00000443430 SEMA4FO95754 770 aa21.71■■□□□ 1.07
POLR2J3-202ENST00000443430 PIK3CAP42336 1068 aa21.71■■□□□ 1.07
POLR2J3-202ENST00000443430 ABCG1P45844 678 aa21.71■■□□□ 1.07
POLR2J3-202ENST00000443430 ARID5AQ03989 594 aa21.71■■□□□ 1.07
POLR2J3-202ENST00000443430 ZNF366Q8N895 744 aa21.71■■□□□ 1.07
POLR2J3-202ENST00000443430 COL26A1Q96A83 441 aa21.71■■□□□ 1.07
POLR2J3-202ENST00000443430 ORAI3Q9BRQ5 295 aa21.71■■□□□ 1.07
POLR2J3-202ENST00000443430 CYP3A43Q9HB55 503 aa21.71■■□□□ 1.07
POLR2J3-202ENST00000443430 APOBEC3GQ9HC16 384 aaKnown RBP21.71■■□□□ 1.07
POLR2J3-202ENST00000443430 PTPRQQ9UMZ3 2332 aa21.71■■□□□ 1.07
POLR2J3-202ENST00000443430 MUC22E2RYF6 1773 aaPredicted RBP21.7■■□□□ 1.06
POLR2J3-202ENST00000443430 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.7■■□□□ 1.06
POLR2J3-202ENST00000443430 SLC12A8A0AV02 714 aa21.7■■□□□ 1.06
POLR2J3-202ENST00000443430 PRB1P04280 392 aa21.7■■□□□ 1.06
POLR2J3-202ENST00000443430 CD27P26842 260 aa21.7■■□□□ 1.06
POLR2J3-202ENST00000443430 HLA-FP30511 346 aa21.7■■□□□ 1.06
POLR2J3-202ENST00000443430 CTSKP43235 329 aa21.7■■□□□ 1.06
POLR2J3-202ENST00000443430 AFMP43652 599 aa21.7■■□□□ 1.06
POLR2J3-202ENST00000443430 STK4Q13043 487 aa21.7■■□□□ 1.06
POLR2J3-202ENST00000443430 TMPRSS12Q86WS5 348 aa21.7■■□□□ 1.06
POLR2J3-202ENST00000443430 KIAA0895Q8NCT3 520 aa21.7■■□□□ 1.06
POLR2J3-202ENST00000443430 ENGASEQ8NFI3 743 aa21.7■■□□□ 1.06
POLR2J3-202ENST00000443430 CYB5D2Q8WUJ1 264 aa21.7■■□□□ 1.06
POLR2J3-202ENST00000443430 BTBD1Q9H0C5 482 aa21.7■■□□□ 1.06
POLR2J3-202ENST00000443430 KCTD10Q9H3F6 313 aa21.7■■□□□ 1.06
POLR2J3-202ENST00000443430 KALRNO60229 2985 aa21.7■■□□□ 1.06
POLR2J3-202ENST00000443430 PLK4O00444 970 aa21.69■■□□□ 1.06
POLR2J3-202ENST00000443430 PAPSS1O43252 624 aaPredicted RBP21.69■■□□□ 1.06
POLR2J3-202ENST00000443430 FSBPO95073 299 aa21.69■■□□□ 1.06
POLR2J3-202ENST00000443430 NR3C1P04150 777 aa21.69■■□□□ 1.06
POLR2J3-202ENST00000443430 CD58P19256 250 aa21.69■■□□□ 1.06
POLR2J3-202ENST00000443430 HOXD9P28356 352 aaPredicted RBP21.69■■□□□ 1.06
POLR2J3-202ENST00000443430 RPS14P62263 151 aaKnown RBP21.69■■□□□ 1.06
POLR2J3-202ENST00000443430 IL9RQ01113 521 aa21.69■■□□□ 1.06
POLR2J3-202ENST00000443430 C19orf57Q0VDD7 668 aa21.69■■□□□ 1.06
POLR2J3-202ENST00000443430 FNDC3BQ53EP0 1204 aaKnown RBP21.69■■□□□ 1.06
POLR2J3-202ENST00000443430 PIP4K2CQ8TBX8 421 aa21.69■■□□□ 1.06
POLR2J3-202ENST00000443430 FTSJ1Q9UET6 329 aa21.69■■□□□ 1.06
POLR2J3-202ENST00000443430 STRIP2Q9ULQ0 834 aa21.69■■□□□ 1.06
POLR2J3-202ENST00000443430 KLRC4O43908 158 aa21.68■■□□□ 1.06
POLR2J3-202ENST00000443430 ITPKBP27987 946 aa21.68■■□□□ 1.06
POLR2J3-202ENST00000443430 MPPE1Q53F39 396 aa21.68■■□□□ 1.06
POLR2J3-202ENST00000443430 RSRC2Q7L4I2 434 aaKnown RBP21.68■■□□□ 1.06
POLR2J3-202ENST00000443430 PLD4Q96BZ4 506 aa21.68■■□□□ 1.06
POLR2J3-202ENST00000443430 ARID3AQ99856 593 aa21.68■■□□□ 1.06
POLR2J3-202ENST00000443430 PRSS16Q9NQE7 514 aa21.68■■□□□ 1.06
POLR2J3-202ENST00000443430 PLA2G4CQ9UP65 541 aa21.68■■□□□ 1.06
POLR2J3-202ENST00000443430 PLXNA2O75051 1894 aa21.67■■□□□ 1.06
POLR2J3-202ENST00000443430 COL5A1P20908 1838 aaPredicted RBP21.67■■□□□ 1.06
POLR2J3-202ENST00000443430 A0A1B0GTQ1 180 aa21.67■■□□□ 1.06
POLR2J3-202ENST00000443430 C1QL1O75973 258 aa21.67■■□□□ 1.06
POLR2J3-202ENST00000443430 YEATS4O95619 227 aa21.67■■□□□ 1.06
POLR2J3-202ENST00000443430 DNTTP04053 509 aa21.67■■□□□ 1.06
POLR2J3-202ENST00000443430 YWHAGP61981 247 aaKnown RBP eCLIP21.67■■□□□ 1.06
POLR2J3-202ENST00000443430 ZBTB16Q05516 673 aa21.67■■□□□ 1.06
POLR2J3-202ENST00000443430 PDE4CQ08493 712 aa21.67■■□□□ 1.06
POLR2J3-202ENST00000443430 TRIP4Q15650 581 aaPredicted RBP21.67■■□□□ 1.06
POLR2J3-202ENST00000443430 INAVAQ3KP66 663 aa21.67■■□□□ 1.06
POLR2J3-202ENST00000443430 RAB41Q5JT25 222 aa21.67■■□□□ 1.06
POLR2J3-202ENST00000443430 CEP135Q66GS9 1140 aa21.67■■□□□ 1.06
POLR2J3-202ENST00000443430 CHST9Q7L1S5 443 aa21.67■■□□□ 1.06
POLR2J3-202ENST00000443430 ADAT2Q7Z6V5 191 aaKnown RBP21.67■■□□□ 1.06
POLR2J3-202ENST00000443430 ADIPOR2Q86V24 386 aa21.67■■□□□ 1.06
POLR2J3-202ENST00000443430 GRAMD1CQ8IYS0 662 aa21.67■■□□□ 1.06
POLR2J3-202ENST00000443430 ARHGAP18Q8N392 663 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms