RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 RFWD3Q6PCD5 774 aa21.91■■□□□ 1.1
CDKN3-204ENST00000442975 WDTC1Q8N5D0 677 aa21.91■■□□□ 1.1
CDKN3-204ENST00000442975 GPR161Q8N6U8 529 aaKnown RBP21.91■■□□□ 1.1
CDKN3-204ENST00000442975 FCRL2Q96LA5 508 aaPredicted RBP21.91■■□□□ 1.1
CDKN3-204ENST00000442975 CIPCQ9C0C6 399 aa21.91■■□□□ 1.1
CDKN3-204ENST00000442975 FAM204AQ9H8W3 233 aa21.91■■□□□ 1.1
CDKN3-204ENST00000442975 FAM207AQ9NSI2 230 aaPredicted RBP21.91■■□□□ 1.1
CDKN3-204ENST00000442975 STOML2Q9UJZ1 356 aa21.91■■□□□ 1.1
CDKN3-204ENST00000442975 FBXO10Q9UK96 956 aa21.91■■□□□ 1.1
CDKN3-204ENST00000442975 RAD54BQ9Y620 910 aa21.91■■□□□ 1.1
CDKN3-204ENST00000442975 ATG2BQ96BY7 2078 aa21.91■■□□□ 1.1
CDKN3-204ENST00000442975 GOLGA6L7A0A1B0GV03 622 aa21.9■■□□□ 1.1
CDKN3-204ENST00000442975 ERBB2P04626 1255 aa21.9■■□□□ 1.1
CDKN3-204ENST00000442975 SGSHP51688 502 aa21.9■■□□□ 1.1
CDKN3-204ENST00000442975 PLK5Q496M5 336 aa21.9■■□□□ 1.1
CDKN3-204ENST00000442975 PTPN20Q4JDL3 420 aa21.9■■□□□ 1.1
CDKN3-204ENST00000442975 OR6B2Q6IFH4 312 aa21.9■■□□□ 1.1
CDKN3-204ENST00000442975 CAVIN1Q6NZI2 390 aaKnown RBP21.9■■□□□ 1.1
CDKN3-204ENST00000442975 FAM183BPQ6ZVS7 135 aa21.9■■□□□ 1.1
CDKN3-204ENST00000442975 AOPEPQ8N6M6 819 aa21.9■■□□□ 1.1
CDKN3-204ENST00000442975 TMA16Q96EY4 203 aaKnown RBP21.9■■□□□ 1.1
CDKN3-204ENST00000442975 SPACA7Q96KW9 195 aa21.9■■□□□ 1.1
CDKN3-204ENST00000442975 PCMTD1Q96MG8 357 aaPredicted RBP21.9■■□□□ 1.1
CDKN3-204ENST00000442975 NAA15Q9BXJ9 866 aaKnown RBP21.9■■□□□ 1.1
CDKN3-204ENST00000442975 LHX5Q9H2C1 402 aa21.9■■□□□ 1.1
CDKN3-204ENST00000442975 TLR6Q9Y2C9 796 aa21.9■■□□□ 1.1
CDKN3-204ENST00000442975 MYOFQ9NZM1 2061 aa21.89■■□□□ 1.1
CDKN3-204ENST00000442975 SYNJ2BP-COX16A0A087WUM0 186 aa21.89■■□□□ 1.09
CDKN3-204ENST00000442975 ZBTB24O43167 697 aaPredicted RBP21.89■■□□□ 1.09
CDKN3-204ENST00000442975 ACSL4O60488 711 aa21.89■■□□□ 1.09
CDKN3-204ENST00000442975 GRAP2O75791 330 aa21.89■■□□□ 1.09
CDKN3-204ENST00000442975 APOEP02649 317 aa21.89■■□□□ 1.09
CDKN3-204ENST00000442975 CYP11B1P15538 503 aa21.89■■□□□ 1.09
CDKN3-204ENST00000442975 COPB1P53618 953 aaKnown RBP21.89■■□□□ 1.09
CDKN3-204ENST00000442975 LMNB2Q03252 620 aa21.89■■□□□ 1.09
CDKN3-204ENST00000442975 NNTQ13423 1086 aa21.89■■□□□ 1.09
CDKN3-204ENST00000442975 CCDC6Q16204 474 aa21.89■■□□□ 1.09
CDKN3-204ENST00000442975 DCAF6Q58WW2 860 aa21.89■■□□□ 1.09
CDKN3-204ENST00000442975 FAM133BQ5BKY9 247 aaKnown RBP21.89■■□□□ 1.09
CDKN3-204ENST00000442975 SMYD5Q6GMV2 418 aa21.89■■□□□ 1.09
CDKN3-204ENST00000442975 BEND5Q7L4P6 421 aa21.89■■□□□ 1.09
CDKN3-204ENST00000442975 UCMAQ8WVF2 138 aa21.89■■□□□ 1.09
CDKN3-204ENST00000442975 RLN3Q8WXF3 142 aa21.89■■□□□ 1.09
CDKN3-204ENST00000442975 STK33Q9BYT3 514 aa21.89■■□□□ 1.09
CDKN3-204ENST00000442975 GANQ9H2C0 597 aa21.89■■□□□ 1.09
CDKN3-204ENST00000442975 ARRDC1-AS1Q9H2J1 176 aa21.89■■□□□ 1.09
CDKN3-204ENST00000442975 SEMA4GQ9NTN9 838 aa21.89■■□□□ 1.09
CDKN3-204ENST00000442975 COX16Q9P0S2 106 aa21.89■■□□□ 1.09
CDKN3-204ENST00000442975 A0A1W2PQF6 199 aa21.88■■□□□ 1.09
CDKN3-204ENST00000442975 IRAK2O43187 625 aa21.88■■□□□ 1.09
CDKN3-204ENST00000442975 TBL1XO60907 577 aa21.88■■□□□ 1.09
CDKN3-204ENST00000442975 HSF2BPO75031 334 aa21.88■■□□□ 1.09
CDKN3-204ENST00000442975 RHOBTB1O94844 696 aa21.88■■□□□ 1.09
CDKN3-204ENST00000442975 EPN2O95208 641 aa21.88■■□□□ 1.09
CDKN3-204ENST00000442975 TRUB2O95900 331 aaKnown RBP21.88■■□□□ 1.09
CDKN3-204ENST00000442975 CDK11BP21127 795 aaKnown RBP21.88■■□□□ 1.09
CDKN3-204ENST00000442975 BCKDHBP21953 392 aa21.88■■□□□ 1.09
CDKN3-204ENST00000442975 SLC6A4P31645 630 aa21.88■■□□□ 1.09
CDKN3-204ENST00000442975 ID4P47928 161 aa21.88■■□□□ 1.09
CDKN3-204ENST00000442975 SNX16P57768 344 aa21.88■■□□□ 1.09
CDKN3-204ENST00000442975 POLR2FP61218 127 aaKnown RBP21.88■■□□□ 1.09
CDKN3-204ENST00000442975 PITX1P78337 314 aaPredicted RBP21.88■■□□□ 1.09
CDKN3-204ENST00000442975 ARID5AQ03989 594 aa21.88■■□□□ 1.09
CDKN3-204ENST00000442975 KIAA1211LQ6NV74 962 aa21.88■■□□□ 1.09
CDKN3-204ENST00000442975 SORCS1Q8WY21 1168 aa21.88■■□□□ 1.09
CDKN3-204ENST00000442975 LOXL4Q96JB6 756 aa21.88■■□□□ 1.09
CDKN3-204ENST00000442975 PRICKLE1Q96MT3 831 aaPredicted RBP21.88■■□□□ 1.09
CDKN3-204ENST00000442975 DDX50Q9BQ39 737 aaKnown RBP21.88■■□□□ 1.09
CDKN3-204ENST00000442975 SLC2A11Q9BYW1 496 aa21.88■■□□□ 1.09
CDKN3-204ENST00000442975 DUSP15Q9H1R2 295 aaPredicted RBP21.88■■□□□ 1.09
CDKN3-204ENST00000442975 CALCOCO1Q9P1Z2 691 aa21.88■■□□□ 1.09
CDKN3-204ENST00000442975 STIM2Q9P246 746 aa21.88■■□□□ 1.09
CDKN3-204ENST00000442975 TYW5A2RUC4 315 aaKnown RBP21.87■■□□□ 1.09
CDKN3-204ENST00000442975 LGALS16A8MUM7 142 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 WASH3PC4AMC7 463 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 GFRA2O00451 464 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 LRP3O75074 770 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 TGM1P22735 817 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 CDK17Q00537 523 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 STARD3Q14849 445 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 EIF4HQ15056 248 aaKnown RBP21.87■■□□□ 1.09
CDKN3-204ENST00000442975 SYCP1Q15431 976 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 ANO6Q4KMQ2 910 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 ZC3H12AQ5D1E8 599 aaKnown RBP21.87■■□□□ 1.09
CDKN3-204ENST00000442975 EFHC1Q5JVL4 640 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 PIK3R6Q5UE93 754 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 NADSYN1Q6IA69 706 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 OLFML1Q6UWY5 402 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 NOP9Q86U38 636 aaKnown RBP21.87■■□□□ 1.09
CDKN3-204ENST00000442975 C11orf74Q86VG3 221 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 DEFB106AQ8N104 65 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 HJURPQ8NCD3 748 aaPredicted RBP21.87■■□□□ 1.09
CDKN3-204ENST00000442975 TMEM35BQ8NCS4 154 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 RMDN1Q96DB5 314 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 SLC39A13Q96H72 371 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 ZC3H10Q96K80 434 aaKnown RBP21.87■■□□□ 1.09
CDKN3-204ENST00000442975 GABRG3Q99928 467 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 NAT10Q9H0A0 1025 aaKnown RBP21.87■■□□□ 1.09
CDKN3-204ENST00000442975 NUCKS1Q9H1E3 243 aaKnown RBP21.87■■□□□ 1.09
CDKN3-204ENST00000442975 NLRC4Q9NPP4 1024 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms