RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 RFC1P35251 1148 aaPredicted RBP12.81□□□□□ -0.36
USP1-203ENST00000442679 SLC6A11P48066 632 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 DEUP1Q05D60 604 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 GAB4Q2WGN9 574 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 CCDC122Q5T0U0 273 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 OTUD1Q5VV17 481 aaPredicted RBP12.81□□□□□ -0.36
USP1-203ENST00000442679 NAIF1Q69YI7 327 aaPredicted RBP12.81□□□□□ -0.36
USP1-203ENST00000442679 TRNP1Q6NT89 227 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 SND1Q7KZF4 910 aaKnown RBP eCLIP12.81□□□□□ -0.36
USP1-203ENST00000442679 FAM217AQ8IXS0 508 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 ZNF687Q8N1G0 1237 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 CPXM2Q8N436 756 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 NAT16Q8N8M0 369 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 ATP6V0D2Q8N8Y2 350 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 CD101Q93033 1021 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 CFAP57Q96MR6 1250 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 TBCBQ99426 244 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 CHP1Q99653 195 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 BBS2Q9BXC9 721 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 ADAM33Q9BZ11 813 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 DEF6Q9H4E7 631 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 LMAN1LQ9HAT1 526 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 FBRSL1Q9HCM7 1045 aaKnown RBP12.81□□□□□ -0.36
USP1-203ENST00000442679 PIGVQ9NUD9 493 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 PARVAQ9NVD7 372 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 MARK1Q9P0L2 795 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 CALCOCO1Q9P1Z2 691 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 TECTAO75443 2155 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 COL4A2P08572 1712 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 TCRBV5S1A1TA0A578 114 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 ANKRD62A6NC57 917 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 C2CD4BA6NLJ0 364 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 KCNU1A8MYU2 1149 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 CYBBP04839 570 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 DCNP07585 359 aaKnown RBP12.8□□□□□ -0.36
USP1-203ENST00000442679 TYRP14679 529 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 ABCB4P21439 1286 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 AVPR2P30518 371 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 SDC4P31431 198 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 OPRD1P41143 372 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 CXCR3P49682 368 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 ATP11AP98196 1134 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 GRSF1Q12849 480 aaKnown RBP eCLIP12.8□□□□□ -0.36
USP1-203ENST00000442679 FZD5Q13467 585 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 MAMLD1Q13495 774 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 PPP2R5DQ14738 602 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 CCDC14Q49A88 953 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 FAM133BQ5BKY9 247 aaKnown RBP12.8□□□□□ -0.36
USP1-203ENST00000442679 TMEM196Q5HYL7 178 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 PPP1R15BQ5SWA1 713 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 PLEKHA7Q6IQ23 1121 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 ALKBH5Q6P6C2 394 aaKnown RBP12.8□□□□□ -0.36
USP1-203ENST00000442679 DCUN1D2Q6PH85 259 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 CCDC105Q8IYK2 499 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 TMEM105Q8N8V8 129 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 TC2NQ8N9U0 490 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 DDI1Q8WTU0 396 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 BHMTQ93088 406 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 TRIM11Q96F44 468 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 PGAP3Q96FM1 320 aaPredicted RBP12.8□□□□□ -0.36
USP1-203ENST00000442679 BTN2A3PQ96KV6 586 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 PNKPQ96T60 521 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 DDX50Q9BQ39 737 aaKnown RBP12.8□□□□□ -0.36
USP1-203ENST00000442679 NHEJ1Q9H9Q4 299 aaPredicted RBP12.8□□□□□ -0.36
USP1-203ENST00000442679 TMEM51Q9NW97 253 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 PLK2Q9NYY3 685 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 CNOT8Q9UFF9 292 aaKnown RBP12.8□□□□□ -0.36
USP1-203ENST00000442679 KIF26AQ9ULI4 1882 aaPredicted RBP12.8□□□□□ -0.36
USP1-203ENST00000442679 TICRRQ7Z2Z1 1910 aa12.8□□□□□ -0.36
USP1-203ENST00000442679 SSU72P8A0A1W2PR75 194 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.79□□□□□ -0.36
USP1-203ENST00000442679 ATMINO43313 823 aaPredicted RBP12.79□□□□□ -0.36
USP1-203ENST00000442679 AKR1B10O60218 316 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 ENDOD1O94919 500 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 PENKP01210 267 aaPredicted RBP12.79□□□□□ -0.36
USP1-203ENST00000442679 MYBL1P10243 752 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 CHRNB1P11230 501 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 GPD1P21695 349 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 DRD1P21728 446 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 CDC25BP30305 580 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 RDXP35241 583 aaKnown RBP12.79□□□□□ -0.36
USP1-203ENST00000442679 PTPN9P43378 593 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 RPL7AP62424 266 aaKnown RBP12.79□□□□□ -0.36
USP1-203ENST00000442679 GFPT1Q06210 699 aaPredicted RBP12.79□□□□□ -0.36
USP1-203ENST00000442679 LRRC32Q14392 662 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 SLC18A3Q16572 532 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 CDO1Q16878 200 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 C15orf59Q2T9L4 293 aaPredicted RBP12.79□□□□□ -0.36
USP1-203ENST00000442679 ASTE1Q2TB18 679 aaPredicted RBP12.79□□□□□ -0.36
USP1-203ENST00000442679 MPPE1Q53F39 396 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 DGKKQ5KSL6 1271 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 FYB2Q5VWT5 728 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 NADSYN1Q6IA69 706 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 FSTL4Q6MZW2 842 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 RFWD3Q6PCD5 774 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 C12orf40Q86WS4 652 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 ETFBKMTQ8IXQ9 262 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 CLDN23Q96B33 292 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 ZNF653Q96CK0 615 aa12.79□□□□□ -0.36
USP1-203ENST00000442679 TMA16Q96EY4 203 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms