RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 EPHX1P07099 455 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 CD6P30203 668 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 OXTRP30559 389 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 RDXP35241 583 aaKnown RBP12.29□□□□□ -0.44
TTC28-203ENST00000442232 IL12RB1P42701 662 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 RGS7P49802 495 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 ZNF234Q14588 700 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 FUT11Q495W5 492 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 FNDC3BQ53EP0 1204 aaKnown RBP12.29□□□□□ -0.44
TTC28-203ENST00000442232 LCLAT1Q6UWP7 414 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 SERPINA13PQ6UXR4 307 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 CCDC117Q8IWD4 279 aaPredicted RBP12.29□□□□□ -0.44
TTC28-203ENST00000442232 FAM217AQ8IXS0 508 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 ELOA2Q8IYF1 753 aaPredicted RBP12.29□□□□□ -0.44
TTC28-203ENST00000442232 ZNF557Q8N988 423 aaPredicted RBP12.29□□□□□ -0.44
TTC28-203ENST00000442232 NELFBQ8WX92 580 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 IRGQQ8WZA9 623 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 NDRG1Q92597 394 aaKnown RBP12.29□□□□□ -0.44
TTC28-203ENST00000442232 PRCCQ92733 491 aaPredicted RBP12.29□□□□□ -0.44
TTC28-203ENST00000442232 SIPA1Q96FS4 1042 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 PIWIL1Q96J94 861 aaKnown RBP12.29□□□□□ -0.44
TTC28-203ENST00000442232 SLC6A17Q9H1V8 727 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 SFMBT1Q9UHJ3 866 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 MAN1B1Q9UKM7 699 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 CTNND2Q9UQB3 1225 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 YJEFN3A6XGL0 299 aa12.28□□□□□ -0.44
TTC28-203ENST00000442232 E7ENQ6 273 aa12.28□□□□□ -0.44
TTC28-203ENST00000442232 ARHGAP33O14559 1287 aa12.28□□□□□ -0.44
TTC28-203ENST00000442232 PMM2O15305 246 aa12.28□□□□□ -0.44
TTC28-203ENST00000442232 FBXO21O94952 628 aa12.28□□□□□ -0.44
TTC28-203ENST00000442232 FGFR1OPO95684 399 aaKnown RBP12.28□□□□□ -0.44
TTC28-203ENST00000442232 NCAM1P13591 858 aa12.28□□□□□ -0.44
TTC28-203ENST00000442232 SLC11A2P49281 568 aa12.28□□□□□ -0.44
TTC28-203ENST00000442232 DAOAP59103 153 aa12.28□□□□□ -0.44
TTC28-203ENST00000442232 PLEKHG6Q3KR16 790 aa12.28□□□□□ -0.44
TTC28-203ENST00000442232 NUGGCQ68CJ6 796 aa12.28□□□□□ -0.44
TTC28-203ENST00000442232 METTL3Q86U44 580 aaKnown RBP12.28□□□□□ -0.44
TTC28-203ENST00000442232 SLC41A1Q8IVJ1 513 aa12.28□□□□□ -0.44
TTC28-203ENST00000442232 UNC45BQ8IWX7 931 aa12.28□□□□□ -0.44
TTC28-203ENST00000442232 SCML4Q8N228 414 aa12.28□□□□□ -0.44
TTC28-203ENST00000442232 MINDY1Q8N5J2 469 aa12.28□□□□□ -0.44
TTC28-203ENST00000442232 UBR7Q8N806 425 aa12.28□□□□□ -0.44
TTC28-203ENST00000442232 RBBP8NLQ8NC74 664 aaPredicted RBP12.28□□□□□ -0.44
TTC28-203ENST00000442232 TMA16Q96EY4 203 aaKnown RBP12.28□□□□□ -0.44
TTC28-203ENST00000442232 TOE1Q96GM8 510 aaKnown RBP12.28□□□□□ -0.44
TTC28-203ENST00000442232 DDX50Q9BQ39 737 aaKnown RBP12.28□□□□□ -0.44
TTC28-203ENST00000442232 CD248Q9HCU0 757 aa12.28□□□□□ -0.44
TTC28-203ENST00000442232 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.28□□□□□ -0.44
TTC28-203ENST00000442232 PLA2G4CQ9UP65 541 aa12.28□□□□□ -0.44
TTC28-203ENST00000442232 PCDH15Q96QU1 1955 aa12.28□□□□□ -0.44
TTC28-203ENST00000442232 CEP295Q9C0D2 2601 aa12.27□□□□□ -0.44
TTC28-203ENST00000442232 BIN1O00499 593 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 IRAK2O43187 625 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 SART1O43290 800 aaKnown RBP12.27□□□□□ -0.45
TTC28-203ENST00000442232 MSI1O43347 362 aaKnown RBP12.27□□□□□ -0.45
TTC28-203ENST00000442232 LTFP02788 710 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 KRT5P13647 590 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 BRD2P25440 801 aaKnown RBP12.27□□□□□ -0.45
TTC28-203ENST00000442232 HOXD9P28356 352 aaPredicted RBP12.27□□□□□ -0.45
TTC28-203ENST00000442232 TBX4P57082 545 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 GCNT1Q02742 428 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 PAK1Q13153 545 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 CNGA2Q16280 664 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 ADGRF1Q5T601 910 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 MSANTD2Q6P1R3 559 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 FOXR2Q6PJQ5 311 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 CHST9Q7L1S5 443 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 BHLHA9Q7RTU4 235 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 CACUL1Q86Y37 369 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 TMPRSS6Q8IU80 811 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 AHI1Q8N157 1196 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 ZNF419Q96HQ0 510 aaPredicted RBP12.27□□□□□ -0.45
TTC28-203ENST00000442232 HSFY1Q96LI6 401 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 TRIM62Q9BVG3 475 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 GPR174Q9BXC1 333 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 IRX2Q9BZI1 471 aaPredicted RBP12.27□□□□□ -0.45
TTC28-203ENST00000442232 MIR1-1HGQ9H1L0 117 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 FBRSQ9HAH7 460 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 CAPN10Q9HC96 672 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 USP36Q9P275 1121 aaKnown RBP12.27□□□□□ -0.45
TTC28-203ENST00000442232 GGA2Q9UJY4 613 aa12.27□□□□□ -0.45
TTC28-203ENST00000442232 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.27□□□□□ -0.45
TTC28-203ENST00000442232 KMT2BQ9UMN6 2715 aaPredicted RBP12.27□□□□□ -0.45
TTC28-203ENST00000442232 CACNA1EQ15878 2313 aa12.26□□□□□ -0.45
TTC28-203ENST00000442232 A0A1B0GTW7 788 aa12.26□□□□□ -0.45
TTC28-203ENST00000442232 UPK3BL1B0FP48 263 aa12.26□□□□□ -0.45
TTC28-203ENST00000442232 UPK3BL2E5RIL1 263 aa12.26□□□□□ -0.45
TTC28-203ENST00000442232 PIK3R2O00459 728 aa12.26□□□□□ -0.45
TTC28-203ENST00000442232 MED7O43513 233 aa12.26□□□□□ -0.45
TTC28-203ENST00000442232 AFPP02771 609 aaKnown RBP12.26□□□□□ -0.45
TTC28-203ENST00000442232 ATP5BP06576 529 aaKnown RBP12.26□□□□□ -0.45
TTC28-203ENST00000442232 PABPC1P11940 636 aaKnown RBP12.26□□□□□ -0.45
TTC28-203ENST00000442232 CD44P16070 742 aaKnown RBP12.26□□□□□ -0.45
TTC28-203ENST00000442232 POLR2EP19388 210 aaKnown RBP12.26□□□□□ -0.45
TTC28-203ENST00000442232 PRKCHP24723 683 aa12.26□□□□□ -0.45
TTC28-203ENST00000442232 ACADSBP45954 432 aa12.26□□□□□ -0.45
TTC28-203ENST00000442232 KCNH2Q12809 1159 aa12.26□□□□□ -0.45
TTC28-203ENST00000442232 ENPP2Q13822 863 aa12.26□□□□□ -0.45
TTC28-203ENST00000442232 HNRNPDQ14103 355 aaKnown RBP12.26□□□□□ -0.45
TTC28-203ENST00000442232 PKDCCQ504Y2 493 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms