RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 PCED1BQ96HM7 432 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 TBC1D10AQ9BXI6 508 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 FOXP3Q9BZS1 431 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 NAALADL1Q9UQQ1 740 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 EXOC1LA0A1B0GW35 172 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 POC1B-GALNT4F8VUJ3 575 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 NDC80O14777 642 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 ZBED1O96006 694 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 CYP2F1P24903 491 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 MATKP42679 507 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 ACLYP53396 1101 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 NOMO1Q15155 1222 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 TIGD5Q53EQ6 642 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 ANKRD22Q5VYY1 191 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 MFN1Q8IWA4 741 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.64□□□□□ -0.07
LIMD1-202ENST00000440097 CCDC185Q8N715 623 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 KLHDC9Q8NEP7 349 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 HHIPL1Q96JK4 782 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 LRRC37BQ96QE4 947 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 KCNK16Q96T55 309 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 ADAM33Q9BZ11 813 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 CRTAC1Q9NQ79 661 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 GABRDO14764 452 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 MDM4O15151 490 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 ENDOD1O94919 500 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 IL4RP24394 825 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 HOXD10P28358 340 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 BRCC3P46736 316 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 WDR4P57081 412 aaKnown RBP14.63□□□□□ -0.07
LIMD1-202ENST00000440097 DNAJC3Q13217 504 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 PPP1R21Q6ZMI0 780 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 PAQR9Q6ZVX9 377 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 LIMS2Q7Z4I7 341 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 TMEM86AQ8N2M4 240 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 ENDOVQ8N8Q3 282 aaKnown RBP14.63□□□□□ -0.07
LIMD1-202ENST00000440097 DNAJC9Q8WXX5 260 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 CPT1BQ92523 772 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 SPOCK2Q92563 424 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 CYLDQ9NQC7 956 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 SRRDQ9UH36 339 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 XPO7Q9UIA9 1087 aaKnown RBP14.63□□□□□ -0.07
LIMD1-202ENST00000440097 A0A0U1RQF3 1178 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 M0QYT0 321 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 ENTPD5O75356 428 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 STIP1P31948 543 aaKnown RBP14.63□□□□□ -0.07
LIMD1-202ENST00000440097 MRPS5P82675 430 aaKnown RBP14.63□□□□□ -0.07
LIMD1-202ENST00000440097 IL9RQ01113 521 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 KLC1Q07866 573 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 LBRQ14739 615 aaKnown RBP14.63□□□□□ -0.07
LIMD1-202ENST00000440097 UPP1Q16831 310 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 TSNAXIP1Q2TAA8 658 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 CMPK2Q5EBM0 449 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 ADAM32Q8TC27 787 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 INPP5DQ92835 1189 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 SLC7A6OSQ96CW6 309 aaPredicted RBP14.63□□□□□ -0.07
LIMD1-202ENST00000440097 PGBD4Q96DM1 585 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 ZNF670Q9BS34 389 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 USH1CQ9Y6N9 552 aa14.63□□□□□ -0.07
LIMD1-202ENST00000440097 T-ENOLP0DO92 83 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 ODC1P11926 461 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 ACADSP16219 412 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 PCSK1P29120 753 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 RPL9P32969 192 aaKnown RBP14.62□□□□□ -0.07
LIMD1-202ENST00000440097 ARL4AP40617 200 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 ARL4CP56559 192 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 ROR2Q01974 943 aaKnown RBP14.62□□□□□ -0.07
LIMD1-202ENST00000440097 BBS9Q3SYG4 887 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 FAM35AQ86V20 835 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 METTL23Q86XA0 190 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 PYROXD2Q8N2H3 581 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 PQLC3Q8N755 202 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 PYROXD1Q8WU10 500 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 TTC25Q96NG3 672 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 RHOBTB2Q9BYZ6 727 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 ULBP1Q9BZM6 244 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 TRPV6Q9H1D0 765 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 NRDE2Q9H7Z3 1164 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 RAB6BQ9NRW1 208 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 LGALS13Q9UHV8 139 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 STAP1Q9ULZ2 295 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 PHTF1Q9UMS5 762 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 ASB3Q9Y575 518 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 CBX6O95503 412 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 TGM2P21980 687 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 RBL1P28749 1068 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 L1CAMP32004 1257 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 RPS6KA3P51812 740 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 PITX1P78337 314 aaPredicted RBP14.62□□□□□ -0.07
LIMD1-202ENST00000440097 PTK7Q13308 1070 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 TMED2Q15363 201 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 SLC25A52Q3SY17 297 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 FAF2Q96CS3 445 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 DENND2DQ9H6A0 471 aaPredicted RBP14.62□□□□□ -0.07
LIMD1-202ENST00000440097 SLCO1B3Q9NPD5 702 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 STARD13Q9Y3M8 1113 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 TCRBV7S3A2A0A539 114 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 CREB3O43889 395 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 CDH16O75309 829 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 SPAG7O75391 227 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms