RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 EPC1Q9H2F5 836 aa24.6■■□□□ 1.53
VARS-217ENST00000440048 ZDHHC4Q9NPG8 344 aa24.6■■□□□ 1.53
VARS-217ENST00000440048 HCN2Q9UL51 889 aa24.6■■□□□ 1.53
VARS-217ENST00000440048 PRRT4C9JH25 899 aa24.59■■□□□ 1.53
VARS-217ENST00000440048 ACSL4O60488 711 aa24.59■■□□□ 1.53
VARS-217ENST00000440048 GRAP2O75791 330 aa24.59■■□□□ 1.53
VARS-217ENST00000440048 LSM8O95777 96 aaKnown RBP24.59■■□□□ 1.53
VARS-217ENST00000440048 TRUB2O95900 331 aaKnown RBP24.59■■□□□ 1.53
VARS-217ENST00000440048 IGLV3-25P01717 112 aa24.59■■□□□ 1.53
VARS-217ENST00000440048 SLC11A2P49281 568 aa24.59■■□□□ 1.53
VARS-217ENST00000440048 PITX1P78337 314 aaPredicted RBP24.59■■□□□ 1.53
VARS-217ENST00000440048 SLC6A3Q01959 620 aa24.59■■□□□ 1.53
VARS-217ENST00000440048 HSF5Q4G112 596 aaPredicted RBP24.59■■□□□ 1.53
VARS-217ENST00000440048 MPPE1Q53F39 396 aa24.59■■□□□ 1.53
VARS-217ENST00000440048 DCAF6Q58WW2 860 aa24.59■■□□□ 1.53
VARS-217ENST00000440048 KCNV2Q8TDN2 545 aa24.59■■□□□ 1.53
VARS-217ENST00000440048 AZIN2Q96A70 460 aa24.59■■□□□ 1.53
VARS-217ENST00000440048 CBX8Q9HC52 389 aa24.59■■□□□ 1.53
VARS-217ENST00000440048 STARD13Q9Y3M8 1113 aa24.59■■□□□ 1.53
VARS-217ENST00000440048 EML5Q05BV3 1969 aa24.59■■□□□ 1.53
VARS-217ENST00000440048 CCDC163A0A0D9SF12 145 aa24.58■■□□□ 1.53
VARS-217ENST00000440048 GOLGA6L7A0A1B0GV03 622 aa24.58■■□□□ 1.53
VARS-217ENST00000440048 FAM170AA1A519 330 aa24.58■■□□□ 1.53
VARS-217ENST00000440048 SGK1O00141 431 aa24.58■■□□□ 1.53
VARS-217ENST00000440048 IRAK2O43187 625 aa24.58■■□□□ 1.53
VARS-217ENST00000440048 HRO43593 1189 aa24.58■■□□□ 1.53
VARS-217ENST00000440048 APBB3O95704 486 aa24.58■■□□□ 1.53
VARS-217ENST00000440048 CHRNB2P17787 502 aa24.58■■□□□ 1.53
VARS-217ENST00000440048 GABRB2P47870 512 aa24.58■■□□□ 1.53
VARS-217ENST00000440048 ZNF445P59923 1031 aa24.58■■□□□ 1.53
VARS-217ENST00000440048 NOMO3P69849 1222 aa24.58■■□□□ 1.53
VARS-217ENST00000440048 CDR2Q01850 454 aa24.58■■□□□ 1.53
VARS-217ENST00000440048 SRSF5Q13243 272 aaKnown RBP24.58■■□□□ 1.53
VARS-217ENST00000440048 SKOR2Q2VWA4 1001 aaPredicted RBP24.58■■□□□ 1.53
VARS-217ENST00000440048 ZSCAN23Q3MJ62 389 aa24.58■■□□□ 1.53
VARS-217ENST00000440048 FAM133BQ5BKY9 247 aaKnown RBP24.58■■□□□ 1.53
VARS-217ENST00000440048 SLC26A9Q7LBE3 791 aa24.58■■□□□ 1.53
VARS-217ENST00000440048 ERICH1Q86X53 443 aa24.58■■□□□ 1.53
VARS-217ENST00000440048 ZDHHC17Q8IUH5 632 aa24.58■■□□□ 1.53
VARS-217ENST00000440048 ZNF513Q8N8E2 541 aaPredicted RBP24.58■■□□□ 1.53
VARS-217ENST00000440048 C18orf8Q96DM3 657 aa24.58■■□□□ 1.53
VARS-217ENST00000440048 CLEC4EQ9ULY5 219 aa24.58■■□□□ 1.53
VARS-217ENST00000440048 SLC27A6Q9Y2P4 619 aa24.58■■□□□ 1.53
VARS-217ENST00000440048 ADAM23O75077 832 aa24.57■■□□□ 1.52
VARS-217ENST00000440048 HNRNPLP14866 589 aaKnown RBP eCLIP24.57■■□□□ 1.52
VARS-217ENST00000440048 HOXD9P28356 352 aaPredicted RBP24.57■■□□□ 1.52
VARS-217ENST00000440048 SLC6A4P31645 630 aa24.57■■□□□ 1.52
VARS-217ENST00000440048 CNR2P34972 360 aa24.57■■□□□ 1.52
VARS-217ENST00000440048 CDK17Q00537 523 aa24.57■■□□□ 1.52
VARS-217ENST00000440048 FMO1Q01740 532 aa24.57■■□□□ 1.52
VARS-217ENST00000440048 CRY1Q16526 586 aa24.57■■□□□ 1.52
VARS-217ENST00000440048 FILIP1LQ4L180 1135 aa24.57■■□□□ 1.52
VARS-217ENST00000440048 NAA35Q5VZE5 725 aa24.57■■□□□ 1.52
VARS-217ENST00000440048 NADSYN1Q6IA69 706 aa24.57■■□□□ 1.52
VARS-217ENST00000440048 RFWD3Q6PCD5 774 aa24.57■■□□□ 1.52
VARS-217ENST00000440048 TMEM92Q6UXU6 159 aa24.57■■□□□ 1.52
VARS-217ENST00000440048 ZNF397Q8NF99 534 aaPredicted RBP24.57■■□□□ 1.52
VARS-217ENST00000440048 CPA5Q8WXQ8 436 aa24.57■■□□□ 1.52
VARS-217ENST00000440048 RUBCNQ92622 972 aa24.57■■□□□ 1.52
VARS-217ENST00000440048 TMA16Q96EY4 203 aaKnown RBP24.57■■□□□ 1.52
VARS-217ENST00000440048 SLC2A11Q9BYW1 496 aa24.57■■□□□ 1.52
VARS-217ENST00000440048 SMG5Q9UPR3 1016 aaKnown RBP24.57■■□□□ 1.52
VARS-217ENST00000440048 DAB1O75553 588 aa24.56■■□□□ 1.52
VARS-217ENST00000440048 SGSHP51688 502 aa24.56■■□□□ 1.52
VARS-217ENST00000440048 EIF4EBP2Q13542 120 aaPredicted RBP24.56■■□□□ 1.52
VARS-217ENST00000440048 ZC3H12AQ5D1E8 599 aaKnown RBP24.56■■□□□ 1.52
VARS-217ENST00000440048 EOGTQ5NDL2 527 aa24.56■■□□□ 1.52
VARS-217ENST00000440048 EGFLAMQ63HQ2 1017 aa24.56■■□□□ 1.52
VARS-217ENST00000440048 LUZP1Q86V48 1076 aa24.56■■□□□ 1.52
VARS-217ENST00000440048 XYLT1Q86Y38 959 aa24.56■■□□□ 1.52
VARS-217ENST00000440048 TSTD1Q8NFU3 115 aa24.56■■□□□ 1.52
VARS-217ENST00000440048 NAP1L5Q96NT1 182 aaPredicted RBP24.56■■□□□ 1.52
VARS-217ENST00000440048 FAM204AQ9H8W3 233 aa24.56■■□□□ 1.52
VARS-217ENST00000440048 A0A1B0GTH6 734 aa24.55■■□□□ 1.52
VARS-217ENST00000440048 AXIN1O15169 862 aa24.55■■□□□ 1.52
VARS-217ENST00000440048 MOCS2O96007 188 aaPredicted RBP24.55■■□□□ 1.52
VARS-217ENST00000440048 CYP1A1P04798 512 aaPredicted RBP24.55■■□□□ 1.52
VARS-217ENST00000440048 DGKEP52429 567 aa24.55■■□□□ 1.52
VARS-217ENST00000440048 ARID5AQ03989 594 aa24.55■■□□□ 1.52
VARS-217ENST00000440048 GEN1Q17RS7 908 aa24.55■■□□□ 1.52
VARS-217ENST00000440048 C2CD6Q53TS8 623 aa24.55■■□□□ 1.52
VARS-217ENST00000440048 PIK3R6Q5UE93 754 aa24.55■■□□□ 1.52
VARS-217ENST00000440048 CACNA2D4Q7Z3S7 1137 aa24.55■■□□□ 1.52
VARS-217ENST00000440048 TRMT11Q7Z4G4 463 aaKnown RBP24.55■■□□□ 1.52
VARS-217ENST00000440048 MSANTD4Q8NCY6 345 aa24.55■■□□□ 1.52
VARS-217ENST00000440048 DDX50Q9BQ39 737 aaKnown RBP24.55■■□□□ 1.52
VARS-217ENST00000440048 IRX2Q9BZI1 471 aaPredicted RBP24.55■■□□□ 1.52
VARS-217ENST00000440048 DDIT4Q9NX09 232 aa24.55■■□□□ 1.52
VARS-217ENST00000440048 EBF1Q9UH73 591 aa24.55■■□□□ 1.52
VARS-217ENST00000440048 XPO7Q9UIA9 1087 aaKnown RBP24.55■■□□□ 1.52
VARS-217ENST00000440048 SPAG17Q6Q759 2223 aa24.55■■□□□ 1.52
VARS-217ENST00000440048 APOEP02649 317 aa24.54■■□□□ 1.52
VARS-217ENST00000440048 NOS2P35228 1153 aa24.54■■□□□ 1.52
VARS-217ENST00000440048 SCNN1AP37088 669 aa24.54■■□□□ 1.52
VARS-217ENST00000440048 SIM2Q14190 667 aaPredicted RBP24.54■■□□□ 1.52
VARS-217ENST00000440048 ACOX2Q99424 681 aa24.54■■□□□ 1.52
VARS-217ENST00000440048 NUCKS1Q9H1E3 243 aaKnown RBP24.54■■□□□ 1.52
VARS-217ENST00000440048 CEP250Q9BV73 2442 aa24.54■■□□□ 1.52
VARS-217ENST00000440048 SYNJ2BP-COX16A0A087WUM0 186 aa24.53■■□□□ 1.52
VARS-217ENST00000440048 TBL1XO60907 577 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms