RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 TUBB2AQ13885 445 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 DPYSL2Q16555 572 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 ATP13A4Q4VNC1 1196 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 ACBD5Q5T8D3 534 aaPredicted RBP21.47■■□□□ 1.03
CHD3-204ENST00000439235 CCDC50Q8IVM0 306 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 CMTM8Q8IZV2 173 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 KCTD6Q8NC69 237 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 ACSF2Q96CM8 615 aaPredicted RBP21.47■■□□□ 1.03
CHD3-204ENST00000439235 BTN2A3PQ96KV6 586 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 SLC22A12Q96S37 553 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 HAPLN3Q96S86 360 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 CYP2S1Q96SQ9 504 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 TUBB2BQ9BVA1 445 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 S1PR5Q9H228 398 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 KLHL11Q9NVR0 708 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 GPATCH2LQ9NWQ4 482 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 SMPD4Q9NXE4 827 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 ARHGAP26Q9UNA1 814 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 MOCS2O96007 188 aaPredicted RBP21.46■■□□□ 1.03
CHD3-204ENST00000439235 CXCR5P32302 372 aa21.46■■□□□ 1.03
CHD3-204ENST00000439235 MTHFRP42898 656 aa21.46■■□□□ 1.03
CHD3-204ENST00000439235 ZNF135P52742 658 aaPredicted RBP21.46■■□□□ 1.03
CHD3-204ENST00000439235 COPS2P61201 443 aa21.46■■□□□ 1.03
CHD3-204ENST00000439235 DCAF12L1Q5VU92 463 aa21.46■■□□□ 1.03
CHD3-204ENST00000439235 Q7L0L9 218 aa21.46■■□□□ 1.03
CHD3-204ENST00000439235 VSIG1Q86XK7 387 aa21.46■■□□□ 1.03
CHD3-204ENST00000439235 ITFG1Q8TB96 612 aa21.46■■□□□ 1.03
CHD3-204ENST00000439235 ING5Q8WYH8 240 aa21.46■■□□□ 1.03
CHD3-204ENST00000439235 MSLNLQ96KJ4 702 aa21.46■■□□□ 1.03
CHD3-204ENST00000439235 DCLK3Q9C098 648 aa21.46■■□□□ 1.03
CHD3-204ENST00000439235 OSBPL2Q9H1P3 480 aa21.46■■□□□ 1.03
CHD3-204ENST00000439235 LSM7Q9UK45 103 aaKnown RBP21.46■■□□□ 1.03
CHD3-204ENST00000439235 PI4K2BG5E9Z4 385 aa21.45■■□□□ 1.02
CHD3-204ENST00000439235 PAGE1O75459 146 aa21.45■■□□□ 1.02
CHD3-204ENST00000439235 STC2O76061 302 aa21.45■■□□□ 1.02
CHD3-204ENST00000439235 IRF1P10914 325 aa21.45■■□□□ 1.02
CHD3-204ENST00000439235 PYGMP11217 842 aa21.45■■□□□ 1.02
CHD3-204ENST00000439235 FOSL2P15408 326 aa21.45■■□□□ 1.02
CHD3-204ENST00000439235 KDELR1P24390 212 aa21.45■■□□□ 1.02
CHD3-204ENST00000439235 LTBRP36941 435 aa21.45■■□□□ 1.02
CHD3-204ENST00000439235 SLC11A2P49281 568 aa21.45■■□□□ 1.02
CHD3-204ENST00000439235 DLX2Q07687 328 aaPredicted RBP21.45■■□□□ 1.02
CHD3-204ENST00000439235 ZNF211Q13398 564 aaPredicted RBP21.45■■□□□ 1.02
CHD3-204ENST00000439235 CLUL1Q15846 466 aa21.45■■□□□ 1.02
CHD3-204ENST00000439235 GET4Q7L5D6 327 aaPredicted RBP21.45■■□□□ 1.02
CHD3-204ENST00000439235 DEFB123Q8N688 67 aa21.45■■□□□ 1.02
CHD3-204ENST00000439235 FAM71BQ8TC56 605 aa21.45■■□□□ 1.02
CHD3-204ENST00000439235 RAPGEF5Q92565 580 aa21.45■■□□□ 1.02
CHD3-204ENST00000439235 RNF25Q96BH1 459 aaPredicted RBP21.45■■□□□ 1.02
CHD3-204ENST00000439235 ZFRQ96KR1 1074 aaKnown RBP21.45■■□□□ 1.02
CHD3-204ENST00000439235 ZNF670Q9BS34 389 aa21.45■■□□□ 1.02
CHD3-204ENST00000439235 PCDH18Q9HCL0 1135 aa21.45■■□□□ 1.02
CHD3-204ENST00000439235 RCOR3Q9P2K3 495 aaPredicted RBP21.45■■□□□ 1.02
CHD3-204ENST00000439235 LAMA2P24043 3122 aaKnown RBP21.44■■□□□ 1.02
CHD3-204ENST00000439235 ZNF487B1APH4 448 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 CEP104O60308 925 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 SRGAP2O75044 1071 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 LATS1O95835 1130 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 WEE1P30291 646 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 CORO1AP31146 461 aaKnown RBP21.44■■□□□ 1.02
CHD3-204ENST00000439235 L1CAMP32004 1257 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 PTPN7P35236 360 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 ARL4AP40617 200 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 ARSEP51690 589 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 KCNQ1P51787 676 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 PPP2R5EQ16537 467 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 CA9Q16790 459 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 PPP6R3Q5H9R7 873 aaPredicted RBP21.44■■□□□ 1.02
CHD3-204ENST00000439235 SPOCD1Q6ZMY3 1216 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 NPAS3Q8IXF0 933 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 COG1Q8WTW3 980 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 AZIN2Q96A70 460 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 NECTIN4Q96NY8 510 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 KCTD15Q96SI1 283 aaPredicted RBP21.44■■□□□ 1.02
CHD3-204ENST00000439235 EPAS1Q99814 870 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 CALN1Q9BXU9 219 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 KIF9Q9HAQ2 790 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 ANLNQ9NQW6 1124 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 TMPRSS4Q9NRS4 437 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 GKN1Q9NS71 199 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 GDE1Q9NZC3 331 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 RNF14Q9UBS8 474 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 CD207Q9UJ71 328 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 SH3BP1Q9Y3L3 701 aa21.44■■□□□ 1.02
CHD3-204ENST00000439235 ANAPC1Q9H1A4 1944 aa21.43■■□□□ 1.02
CHD3-204ENST00000439235 H3BRJ5 948 aa21.43■■□□□ 1.02
CHD3-204ENST00000439235 I6L893 689 aaPredicted RBP21.43■■□□□ 1.02
CHD3-204ENST00000439235 HTR7P34969 479 aa21.43■■□□□ 1.02
CHD3-204ENST00000439235 NRG1Q02297 640 aaPredicted RBP21.43■■□□□ 1.02
CHD3-204ENST00000439235 DPYSL3Q14195 570 aa21.43■■□□□ 1.02
CHD3-204ENST00000439235 TFDP3Q5H9I0 405 aa21.43■■□□□ 1.02
CHD3-204ENST00000439235 CCDC181Q5TID7 509 aa21.43■■□□□ 1.02
CHD3-204ENST00000439235 MFSD7Q6UXD7 560 aa21.43■■□□□ 1.02
CHD3-204ENST00000439235 SMRP1Q8NCR6 262 aa21.43■■□□□ 1.02
CHD3-204ENST00000439235 C1orf74Q96LT6 269 aa21.43■■□□□ 1.02
CHD3-204ENST00000439235 GUCD1Q96NT3 240 aa21.43■■□□□ 1.02
CHD3-204ENST00000439235 DDX50Q9BQ39 737 aaKnown RBP21.43■■□□□ 1.02
CHD3-204ENST00000439235 TDP1Q9NUW8 608 aa21.43■■□□□ 1.02
CHD3-204ENST00000439235 CDC23Q9UJX2 597 aa21.43■■□□□ 1.02
CHD3-204ENST00000439235 C3orf70A6NLC5 250 aaPredicted RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms