RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 RICTORQ6R327 1708 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 TISP43B9A030 160 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 FZD9O00144 591 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 SMAPO00193 183 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 ZNF500O60304 480 aaPredicted RBP12.42□□□□□ -0.42
NEK1-201ENST00000439128 AMPD1P23109 780 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 MAP2K2P36507 400 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 ALDH9A1P49189 494 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 ANXA11P50995 505 aaKnown RBP12.42□□□□□ -0.42
NEK1-201ENST00000439128 PTENP60484 403 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 EXD1Q8NHP7 514 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 PLEKHA8Q96JA3 519 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 ING2Q9H160 280 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 RHBGQ9H310 441 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 KBTBD4Q9NVX7 518 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 RNF186Q9NXI6 227 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 E5RJQ4 531 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 PIK3CDO00329 1044 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 PDE2AO00408 941 aaPredicted RBP12.42□□□□□ -0.42
NEK1-201ENST00000439128 MEIS2O14770 477 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 NFATC1O95644 943 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 APOA4P06727 396 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 PAX3P23760 479 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 TNFSF9P41273 254 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 MMP13P45452 471 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 PRIM2P49643 509 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 STX3Q13277 289 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 ZSCAN26Q16670 478 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 LONRF1Q17RB8 773 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 CYP4X1Q8N118 509 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 LZTR1Q8N653 840 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 KLF6Q99612 283 aaPredicted RBP12.42□□□□□ -0.42
NEK1-201ENST00000439128 DEC1Q9P2X7 70 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 RUVBL2Q9Y230 463 aaKnown RBP12.42□□□□□ -0.42
NEK1-201ENST00000439128 EIF3LQ9Y262 564 aaKnown RBP12.42□□□□□ -0.42
NEK1-201ENST00000439128 SDR42E2A6NKP2 422 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 SUPT7LO94864 414 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 SNRPAP09012 282 aaKnown RBP12.42□□□□□ -0.42
NEK1-201ENST00000439128 ZNF7P17097 686 aaPredicted RBP12.42□□□□□ -0.42
NEK1-201ENST00000439128 MAGEA4P43358 317 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 ARHGEF19Q8IW93 802 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 C4orf33Q8N1A6 199 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 SYN2Q92777 582 aaPredicted RBP12.42□□□□□ -0.42
NEK1-201ENST00000439128 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.42□□□□□ -0.42
NEK1-201ENST00000439128 A0A1B0GUA9 196 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 SYCE1LA8MT33 242 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 CCND3P30281 292 aaPredicted RBP12.42□□□□□ -0.42
NEK1-201ENST00000439128 TSHZ1Q6ZSZ6 1077 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 UNC93AQ86WB7 457 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 KIRREL3Q8IZU9 778 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 FAM162AQ96A26 154 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 DNAJC1Q96KC8 554 aaKnown RBP12.42□□□□□ -0.42
NEK1-201ENST00000439128 LRRC40Q9H9A6 602 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 SCHIP1Q9P0W5 487 aaPredicted RBP12.42□□□□□ -0.42
NEK1-201ENST00000439128 ANGPTL2Q9UKU9 493 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 AURKCQ9UQB9 309 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 CDYLQ9Y232 598 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 ZDHHC9Q9Y397 364 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 MGAT4DA6NG13 374 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 SMIM22K7EJ46 135 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 TPH1P17752 444 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 PFKPQ01813 784 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 ZNF268Q14587 947 aaPredicted RBP12.41□□□□□ -0.42
NEK1-201ENST00000439128 CACHD1Q5VU97 1274 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 DET1Q7L5Y6 550 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 SPATA4Q8NEY3 305 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 MTMR9Q96QG7 549 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 SNX12Q9UMY4 172 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 ZNF510Q9Y2H8 683 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 EIF2S1P05198 315 aaKnown RBP12.41□□□□□ -0.42
NEK1-201ENST00000439128 TEDDM1Q5T9Z0 273 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 SPOCD1Q6ZMY3 1216 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 RASAL3Q86YV0 1011 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 MTMR14Q8NCE2 650 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 ZNF296Q8WUU4 475 aaPredicted RBP12.41□□□□□ -0.42
NEK1-201ENST00000439128 SHCBP1LQ9BZQ2 653 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 H2AFY2Q9P0M6 372 aaPredicted RBP12.41□□□□□ -0.42
NEK1-201ENST00000439128 MARCOQ9UEW3 520 aaPredicted RBP12.41□□□□□ -0.42
NEK1-201ENST00000439128 PADI4Q9UM07 663 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 SHOC2Q9UQ13 582 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 A0A0A6YYK5 440 aaPredicted RBP12.41□□□□□ -0.42
NEK1-201ENST00000439128 ZNF839A8K0R7 811 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 TLR5O60602 858 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 GTF2E2P29084 291 aaKnown RBP12.41□□□□□ -0.42
NEK1-201ENST00000439128 SKP1P63208 163 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 GALNTL6Q49A17 601 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 DBF4BQ8NFT6 615 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 GLMNQ92990 594 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 EVPLLA8MZ36 301 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 ARVCFO00192 962 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 OR4Q2P0C623 313 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 SLC12A3P55017 1021 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 KCNK10P57789 538 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 ERVK-21P61565 698 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 ESRRGP62508 458 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 JAMLQ86YT9 394 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 COLGALT2Q8IYK4 626 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 KRT78Q8N1N4 520 aa12.41□□□□□ -0.42
NEK1-201ENST00000439128 FRMD8P1Q9BZ68 369 aaPredicted RBP12.41□□□□□ -0.42
NEK1-201ENST00000439128 PTPN2P17706 415 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms