RNA–Protein interactions for RNA: ENST00000438929.5

BDNF-210, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-210ENST00000438929 CHSY1Q86X52 802 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 MCPH1Q8NEM0 835 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 ZC3H15Q8WU90 426 aaKnown RBP6.33□□□□□ -1.4
BDNF-210ENST00000438929 COX4I2Q96KJ9 171 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 LENG8Q96PV6 779 aaPredicted RBP6.33□□□□□ -1.4
BDNF-210ENST00000438929 RMDN3Q96TC7 470 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 MTG1Q9BT17 334 aaPredicted RBP6.33□□□□□ -1.4
BDNF-210ENST00000438929 CEP41Q9BYV8 373 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 TDRD3Q9H7E2 651 aaKnown RBP6.33□□□□□ -1.4
BDNF-210ENST00000438929 MRPL40Q9NQ50 206 aaKnown RBP6.33□□□□□ -1.4
BDNF-210ENST00000438929 DDX4Q9NQI0 724 aaKnown RBP6.33□□□□□ -1.4
BDNF-210ENST00000438929 DNAJB4Q9UDY4 337 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 SLC39A10Q9ULF5 831 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 BARX2Q9UMQ3 279 aaPredicted RBP6.33□□□□□ -1.4
BDNF-210ENST00000438929 COQ6Q9Y2Z9 468 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 PCDHGA4Q9Y5G9 962 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 MYO5AQ9Y4I1 1855 aaKnown RBP6.33□□□□□ -1.4
BDNF-210ENST00000438929 CYP1A1P04798 512 aaPredicted RBP6.33□□□□□ -1.4
BDNF-210ENST00000438929 PDGFRBP09619 1106 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 FGFR1P11362 822 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 SERPINB1P30740 379 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 GPC3P51654 580 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 SLC18A1P54219 525 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 NME5P56597 212 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 TMEM62Q0P6H9 643 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 LDLRAP1Q5SW96 308 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 KRT27Q7Z3Y8 459 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 CDR2LQ86X02 465 aaPredicted RBP6.33□□□□□ -1.4
BDNF-210ENST00000438929 SLC9A9Q8IVB4 645 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 C10orf107Q8IVU9 208 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 HELQQ8TDG4 1101 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 ZNF669Q96BR6 464 aaPredicted RBP6.33□□□□□ -1.4
BDNF-210ENST00000438929 ANKRD36BP1Q96IX9 119 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 MBOAT7Q96N66 472 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 TLE6Q9H808 572 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 XPNPEP1Q9NQW7 623 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 ATAD3AQ9NVI7 634 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 BFARQ9NZS9 450 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 DCDC2Q9UHG0 476 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 GMEB1Q9Y692 573 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 CLUHO75153 1309 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 ANKRD12Q6UB98 2062 aa6.33□□□□□ -1.4
BDNF-210ENST00000438929 IQCA1LA6NCM1 817 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 M0R3G1 203 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 MATN2O00339 956 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 TPP1O14773 563 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 CLOCKO15516 846 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 UGT1A9O60656 530 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 LDHAP00338 332 aaKnown RBP6.32□□□□□ -1.4
BDNF-210ENST00000438929 NFKBIAP25963 317 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 KLRC2P26717 231 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 RBL1P28749 1068 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 CRKP46108 304 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 CSE1LP55060 971 aaKnown RBP6.32□□□□□ -1.4
BDNF-210ENST00000438929 NOMO3P69849 1222 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 MMRN1Q13201 1228 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 CARTPTQ16568 116 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 DGKDQ16760 1214 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 TXNRD3NBQ6F5E7 133 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 SLFN12LQ6IEE8 588 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 CDC42EP5Q6NZY7 148 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 XKR5Q6UX68 686 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 SETD3Q86TU7 594 aaPredicted RBP6.32□□□□□ -1.4
BDNF-210ENST00000438929 MCF2L2Q86YR7 1114 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 GABPB2Q8TAK5 448 aaPredicted RBP6.32□□□□□ -1.4
BDNF-210ENST00000438929 UBA3Q8TBC4 463 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 RNF34Q969K3 372 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 VPS50Q96JG6 964 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 PPP1R16BQ96T49 567 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 WDR18Q9BV38 432 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 UGT1A7Q9HAW7 530 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 UGT1A10Q9HAW8 530 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 UGT1A8Q9HAW9 530 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 TBC1D22BQ9NU19 505 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 FBXO28Q9NVF7 368 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 CCDC167Q9P0B6 97 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 SPATA7Q9P0W8 599 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 USP18Q9UMW8 372 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 CNTNAP2Q9UHC6 1331 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 J3QRK9 145 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 AP3B1O00203 1094 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 POLRMTO00411 1230 aaKnown RBP6.32□□□□□ -1.4
BDNF-210ENST00000438929 SHMT1P34896 483 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 KLF10Q13118 480 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 USP10Q14694 798 aaKnown RBP6.32□□□□□ -1.4
BDNF-210ENST00000438929 TAF12Q16514 161 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 SHROOM1Q2M3G4 852 aaPredicted RBP6.32□□□□□ -1.4
BDNF-210ENST00000438929 MTX3Q5HYI7 312 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 GLRA4Q5JXX5 417 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 OTUD3Q5T2D3 398 aaPredicted RBP6.32□□□□□ -1.4
BDNF-210ENST00000438929 ZNF618Q5T7W0 954 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 CDHR3Q6ZTQ4 885 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 ILDR2Q71H61 639 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 CDKL3Q8IVW4 592 aaPredicted RBP6.32□□□□□ -1.4
BDNF-210ENST00000438929 CLEC4FQ8N1N0 589 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 DCAKDQ8WVC6 231 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 FBXL8Q96CD0 374 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 MXRA8Q9BRK3 442 aa6.32□□□□□ -1.4
BDNF-210ENST00000438929 GPATCH1Q9BRR8 931 aaKnown RBP6.32□□□□□ -1.4
BDNF-210ENST00000438929 OSBPL6Q9BZF3 934 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms