RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 CHMP5Q9NZZ3 219 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 ADAMTS1Q9UHI8 967 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 PTPRJQ12913 1337 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 TEX15Q9BXT5 2789 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 CKAP5Q14008 2032 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 KLK10O43240 276 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 DXOO77932 396 aaKnown RBP11.75□□□□□ -0.53
CSTF3-203ENST00000438862 FSBPO95073 299 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 SEMA4FO95754 770 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 AVPP01185 164 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 EPHX1P07099 455 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 TMEM191BP0C7N4 346 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 ZDHHC11BP0C7U3 371 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 PTPN1P18031 435 aaKnown RBP11.75□□□□□ -0.53
CSTF3-203ENST00000438862 CACNA2D1P54289 1103 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 GRIN1Q05586 938 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 SCARA3Q6AZY7 606 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 LAYNQ6UX15 382 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 TREML4Q6UXN2 200 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 GPBP1Q86WP2 473 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 RDH13Q8NBN7 331 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 OR2T3Q8NH03 318 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 HVCN1Q96D96 273 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 FAM213AQ9BRX8 229 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 KLF16Q9BXK1 252 aaPredicted RBP11.75□□□□□ -0.53
CSTF3-203ENST00000438862 TRIM9Q9C026 710 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 LHX5Q9H2C1 402 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 SNX25Q9H3E2 840 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 ZHX3Q9H4I2 956 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 RBAKQ9NYW8 714 aaPredicted RBP11.75□□□□□ -0.53
CSTF3-203ENST00000438862 SIX4Q9UIU6 781 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 MTMR6Q9Y217 621 aa11.75□□□□□ -0.53
CSTF3-203ENST00000438862 TP53BP1Q12888 1972 aaPredicted RBP11.74□□□□□ -0.53
CSTF3-203ENST00000438862 NUMA1Q14980 2115 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 FAM92AA1XBS5 289 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 TERTO14746 1132 aaKnown RBP11.74□□□□□ -0.53
CSTF3-203ENST00000438862 SLC26A4O43511 780 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 TIMM44O43615 452 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 KRT18P05783 430 aaKnown RBP11.74□□□□□ -0.53
CSTF3-203ENST00000438862 GP1BBP13224 206 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 ATP5C1P36542 298 aaKnown RBP11.74□□□□□ -0.53
CSTF3-203ENST00000438862 ARRB1P49407 418 aaPredicted RBP11.74□□□□□ -0.53
CSTF3-203ENST00000438862 TOB1P50616 345 aaPredicted RBP11.74□□□□□ -0.53
CSTF3-203ENST00000438862 MFAP3P55082 362 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 WNT7BP56706 349 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 INSM1Q01101 510 aaPredicted RBP11.74□□□□□ -0.53
CSTF3-203ENST00000438862 ZBTB16Q05516 673 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 ZNF234Q14588 700 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 EIF4HQ15056 248 aaKnown RBP11.74□□□□□ -0.53
CSTF3-203ENST00000438862 TMEM119Q4V9L6 283 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 PRAMEF14Q5SWL7 426 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 XKR5Q6UX68 686 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 ATG14Q6ZNE5 492 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 BRAPQ7Z569 592 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 ANKRD36BP1Q96IX9 119 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 MMS19Q96T76 1030 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 SGK2Q9HBY8 427 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 TMEM30AQ9NV96 361 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 ELOVL2Q9NXB9 296 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 PLK2Q9NYY3 685 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 ANKMY1Q9P2S6 941 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 ATP6V1DQ9Y5K8 247 aa11.74□□□□□ -0.53
CSTF3-203ENST00000438862 K7ENP7 123 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 TLR5O60602 858 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 TBCAO75347 108 aaKnown RBP11.73□□□□□ -0.53
CSTF3-203ENST00000438862 TACC1O75410 805 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 MT-CO3P00414 261 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 ZSCAN22P10073 491 aaPredicted RBP11.73□□□□□ -0.53
CSTF3-203ENST00000438862 ACP1P24666 158 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 CAMK2GQ13555 558 aaPredicted RBP11.73□□□□□ -0.53
CSTF3-203ENST00000438862 SHBQ15464 509 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 GEN1Q17RS7 908 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 ATL3Q6DD88 541 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 INO80CQ6PI98 192 aaPredicted RBP11.73□□□□□ -0.53
CSTF3-203ENST00000438862 SERPINA13PQ6UXR4 307 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 KDM7AQ6ZMT4 941 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 ZNF720Q7Z2F6 126 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 CACUL1Q86Y37 369 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 OR6B3Q8NGW1 331 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 SCAMP5Q8TAC9 235 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 ORAI3Q9BRQ5 295 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 TRIM4Q9C037 500 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 ZNF518BQ9C0D4 1074 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 MTMR12Q9C0I1 747 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 FBRSQ9HAH7 460 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 GDF3Q9NR23 364 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 TLR8Q9NR97 1041 aaKnown RBP11.73□□□□□ -0.53
CSTF3-203ENST00000438862 EXOC7Q9UPT5 735 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 ZNF510Q9Y2H8 683 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 DOPEY2Q9Y3R5 2298 aa11.73□□□□□ -0.53
CSTF3-203ENST00000438862 ATP8B3O60423 1300 aa11.72□□□□□ -0.53
CSTF3-203ENST00000438862 A0A1W2PPC4 97 aa11.72□□□□□ -0.53
CSTF3-203ENST00000438862 VPS37CA5D8V6 355 aaPredicted RBP11.72□□□□□ -0.53
CSTF3-203ENST00000438862 PENKP01210 267 aaPredicted RBP11.72□□□□□ -0.53
CSTF3-203ENST00000438862 TNNC2P02585 160 aa11.72□□□□□ -0.53
CSTF3-203ENST00000438862 GARTP22102 1010 aa11.72□□□□□ -0.53
CSTF3-203ENST00000438862 PRKCHP24723 683 aa11.72□□□□□ -0.53
CSTF3-203ENST00000438862 EPHA8P29322 1005 aaPredicted RBP11.72□□□□□ -0.53
CSTF3-203ENST00000438862 CHKAP35790 457 aa11.72□□□□□ -0.53
CSTF3-203ENST00000438862 PLA2G4AP47712 749 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms