RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 BCAT1P54687 386 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 HDAC4P56524 1084 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 BST2Q10589 180 aaKnown RBP14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 PGBD4Q96DM1 585 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 DNAI2Q9GZS0 605 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 UNC93B1Q9H1C4 597 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 MYLK2Q9H1R3 596 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 SENP1Q9P0U3 644 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 HAO1Q9UJM8 370 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 SMG5Q9UPR3 1016 aaKnown RBP14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 H0Y3Z8 333 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 ARVCFO00192 962 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 TYROBPO43914 113 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 YWHAGP61981 247 aaKnown RBP eCLIP14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 BLMHQ13867 455 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 UPP1Q16831 310 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 BOLA3Q53S33 107 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 LVRNQ6Q4G3 990 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 TMEM110Q86TL2 294 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 USP29Q9HBJ7 922 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 KLHL14Q9P2G3 628 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 TIMM13Q9Y5L4 95 aaPredicted RBP14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 WDR91A4D1P6 747 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 GABRDO14764 452 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 UNC5CO95185 931 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 ZBED1O96006 694 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 RPL9P32969 192 aaKnown RBP14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 KCNJ11Q14654 390 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 PDK2Q15119 407 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 KLHL38Q2WGJ6 581 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 PAN2Q504Q3 1202 aaKnown RBP14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 HHATQ5VTY9 493 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 ADGRD1Q6QNK2 874 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 DSTYKQ6XUX3 929 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 AGGF1Q8N302 714 aaeCLIP14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 STK32AQ8WU08 396 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 NAF1Q96HR8 494 aaKnown RBP14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 DDX43Q9NXZ2 648 aaKnown RBP14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 PHTF1Q9UMS5 762 aa14.36□□□□□ -0.11
PTCHD3-201ENST00000438700 TCRBV9S1A1TA0A576 114 aa14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 APRTP07741 180 aa14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 PDHA1P08559 390 aa14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 SKIP12755 728 aa14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 ADRA1DP25100 572 aa14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 KBTBD12Q3ZCT8 623 aa14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 KIAA0319Q5VV43 1072 aa14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 ZNF598Q86UK7 904 aaKnown RBP14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 SPDYE1Q8NFV5 336 aaPredicted RBP14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 CCDC110Q8TBZ0 833 aa14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 DCAKDQ8WVC6 231 aa14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 ERP27Q96DN0 273 aa14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 CFAP36Q96G28 342 aa14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 PHACTR1Q9C0D0 580 aa14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 DHX35Q9H5Z1 703 aaKnown RBP14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 PPCSQ9HAB8 311 aa14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 I3L4J1 428 aa14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 CLDN5O00501 218 aa14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 DPYSL4O14531 572 aa14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 CCNB1P14635 433 aa14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 PTPN1P18031 435 aaKnown RBP14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 IRX1P78414 480 aaPredicted RBP14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 RTN4RL1Q86UN2 441 aaPredicted RBP14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 GBP7Q8N8V2 638 aaPredicted RBP14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 LRRC8CQ8TDW0 803 aa14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 OSBPL1AQ9BXW6 950 aa14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.35□□□□□ -0.11
PTCHD3-201ENST00000438700 MYO18AQ92614 2054 aaKnown RBP14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 DPPA5A6NC42 116 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 CYP2F1P24903 491 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 SNX16P57768 344 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 GBE1Q04446 702 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 PDK4Q16654 411 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 TIGD5Q53EQ6 642 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 MDH1BQ5I0G3 518 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 ZNF449Q6P9G9 518 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 TMEM86AQ8N2M4 240 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 TTC8Q8TAM2 541 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 HASPINQ8TF76 798 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 LINC01599Q8WXQ3 324 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 NDRG1Q92597 394 aaKnown RBP14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 HNRNPABQ99729 332 aaKnown RBP14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 DHRS4Q9BTZ2 278 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 RGS18Q9NS28 235 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 CHKBQ9Y259 395 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 NR2E3Q9Y5X4 410 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 TEX264Q9Y6I9 313 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 TSC2P49815 1807 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 B3GAT3O94766 335 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 FAM163BP0C2L3 166 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 DESP17661 470 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 TGM2P21980 687 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 RASA2Q15283 850 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 SEPT7Q16181 437 aaKnown RBP14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 SLC9A4Q6AI14 798 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 ANO7Q6IWH7 933 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 TCP10LQ8TDR4 215 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 MZB1Q8WU39 189 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 TEKT4Q8WW24 435 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 CYTH2Q99418 400 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 NRDE2Q9H7Z3 1164 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms