RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 HAUS4Q9H6D7 363 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 DNAJC17Q9NVM6 304 aaKnown RBP17.02■□□□□ 0.32
CTSD-205ENST00000438213 FBXO4Q9UKT5 387 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 CACNA1IQ9P0X4 2223 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 MUC6Q6W4X9 2439 aa17.01■□□□□ 0.31
CTSD-205ENST00000438213 ITIH6Q6UXX5 1313 aa17.01■□□□□ 0.31
CTSD-205ENST00000438213 FAM170AA1A519 330 aa17.01■□□□□ 0.31
CTSD-205ENST00000438213 M0QYT0 321 aa17.01■□□□□ 0.31
CTSD-205ENST00000438213 RNF40O75150 1001 aa17.01■□□□□ 0.31
CTSD-205ENST00000438213 PENKP01210 267 aaPredicted RBP17.01■□□□□ 0.31
CTSD-205ENST00000438213 IGLV3-25P01717 112 aa17.01■□□□□ 0.31
CTSD-205ENST00000438213 ABCB4P21439 1286 aa17.01■□□□□ 0.31
CTSD-205ENST00000438213 CCR1P32246 355 aa17.01■□□□□ 0.31
CTSD-205ENST00000438213 CSTF1Q05048 431 aaKnown RBP17.01■□□□□ 0.31
CTSD-205ENST00000438213 C1QBPQ07021 282 aaKnown RBP17.01■□□□□ 0.31
CTSD-205ENST00000438213 C2CD6Q53TS8 623 aa17.01■□□□□ 0.31
CTSD-205ENST00000438213 ACAD10Q6JQN1 1059 aa17.01■□□□□ 0.31
CTSD-205ENST00000438213 C12orf40Q86WS4 652 aa17.01■□□□□ 0.31
CTSD-205ENST00000438213 ATOH1Q92858 354 aaPredicted RBP17.01■□□□□ 0.31
CTSD-205ENST00000438213 BTN2A3PQ96KV6 586 aa17.01■□□□□ 0.31
CTSD-205ENST00000438213 C11orf70Q9BRQ4 267 aa17.01■□□□□ 0.31
CTSD-205ENST00000438213 ANP32EQ9BTT0 268 aa17.01■□□□□ 0.31
CTSD-205ENST00000438213 SLC2A11Q9BYW1 496 aa17.01■□□□□ 0.31
CTSD-205ENST00000438213 PLK2Q9NYY3 685 aa17.01■□□□□ 0.31
CTSD-205ENST00000438213 PAXBP1Q9Y5B6 917 aa17.01■□□□□ 0.31
CTSD-205ENST00000438213 CACNA1HO95180 2353 aa17.01■□□□□ 0.31
CTSD-205ENST00000438213 SYNJ2BP-COX16A0A087WUM0 186 aa17■□□□□ 0.31
CTSD-205ENST00000438213 TYW5A2RUC4 315 aaKnown RBP17■□□□□ 0.31
CTSD-205ENST00000438213 CHURC1-FNTBB4DL54 471 aa17■□□□□ 0.31
CTSD-205ENST00000438213 K7EQS6 105 aa17■□□□□ 0.31
CTSD-205ENST00000438213 TSPAN3O60637 253 aa17■□□□□ 0.31
CTSD-205ENST00000438213 MOCS2O96007 188 aaPredicted RBP17■□□□□ 0.31
CTSD-205ENST00000438213 TPM1P09493 284 aa17■□□□□ 0.31
CTSD-205ENST00000438213 DGKGP49619 791 aa17■□□□□ 0.31
CTSD-205ENST00000438213 PITX1P78337 314 aaPredicted RBP17■□□□□ 0.31
CTSD-205ENST00000438213 MRPS21P82921 87 aaKnown RBP17■□□□□ 0.31
CTSD-205ENST00000438213 KDSRQ06136 332 aa17■□□□□ 0.31
CTSD-205ENST00000438213 NME3Q13232 169 aa17■□□□□ 0.31
CTSD-205ENST00000438213 EIF4EBP2Q13542 120 aaPredicted RBP17■□□□□ 0.31
CTSD-205ENST00000438213 TRIM14Q14142 442 aa17■□□□□ 0.31
CTSD-205ENST00000438213 GAS6Q14393 721 aa17■□□□□ 0.31
CTSD-205ENST00000438213 ZNF528Q3MIS6 628 aa17■□□□□ 0.31
CTSD-205ENST00000438213 SLC25A52Q3SY17 297 aa17■□□□□ 0.31
CTSD-205ENST00000438213 MPP7Q5T2T1 576 aa17■□□□□ 0.31
CTSD-205ENST00000438213 FYB2Q5VWT5 728 aa17■□□□□ 0.31
CTSD-205ENST00000438213 SPECC1LQ69YQ0 1117 aa17■□□□□ 0.31
CTSD-205ENST00000438213 Q6ZS52 159 aa17■□□□□ 0.31
CTSD-205ENST00000438213 VPS36Q86VN1 386 aa17■□□□□ 0.31
CTSD-205ENST00000438213 KCNV2Q8TDN2 545 aa17■□□□□ 0.31
CTSD-205ENST00000438213 VCPIP1Q96JH7 1222 aa17■□□□□ 0.31
CTSD-205ENST00000438213 NPY6RQ99463 290 aa17■□□□□ 0.31
CTSD-205ENST00000438213 COX16Q9P0S2 106 aa17■□□□□ 0.31
CTSD-205ENST00000438213 TMEM59LQ9UK28 342 aa17■□□□□ 0.31
CTSD-205ENST00000438213 FBXO10Q9UK96 956 aa17■□□□□ 0.31
CTSD-205ENST00000438213 KCNU1A8MYU2 1149 aa16.99■□□□□ 0.31
CTSD-205ENST00000438213 SP9P0CG40 484 aa16.99■□□□□ 0.31
CTSD-205ENST00000438213 KRT3P12035 628 aa16.99■□□□□ 0.31
CTSD-205ENST00000438213 GZMAP12544 262 aa16.99■□□□□ 0.31
CTSD-205ENST00000438213 SKILP12757 684 aa16.99■□□□□ 0.31
CTSD-205ENST00000438213 SULT1E1P49888 294 aa16.99■□□□□ 0.31
CTSD-205ENST00000438213 NRLP54845 237 aa16.99■□□□□ 0.31
CTSD-205ENST00000438213 HSF5Q4G112 596 aaPredicted RBP16.99■□□□□ 0.31
CTSD-205ENST00000438213 PIK3R6Q5UE93 754 aa16.99■□□□□ 0.31
CTSD-205ENST00000438213 ZNF571Q7Z3V5 609 aaPredicted RBP16.99■□□□□ 0.31
CTSD-205ENST00000438213 CCDC117Q8IWD4 279 aaPredicted RBP16.99■□□□□ 0.31
CTSD-205ENST00000438213 ZNF557Q8N988 423 aaPredicted RBP16.99■□□□□ 0.31
CTSD-205ENST00000438213 TERB1Q8NA31 727 aa16.99■□□□□ 0.31
CTSD-205ENST00000438213 USP33Q8TEY7 942 aa16.99■□□□□ 0.31
CTSD-205ENST00000438213 EZH1Q92800 747 aaPredicted RBP16.99■□□□□ 0.31
CTSD-205ENST00000438213 NT5C3BQ969T7 300 aa16.99■□□□□ 0.31
CTSD-205ENST00000438213 ACDQ96AP0 544 aa16.99■□□□□ 0.31
CTSD-205ENST00000438213 PGAP3Q96FM1 320 aaPredicted RBP16.99■□□□□ 0.31
CTSD-205ENST00000438213 SYT11Q9BT88 431 aa16.99■□□□□ 0.31
CTSD-205ENST00000438213 SELENOOQ9BVL4 669 aa16.99■□□□□ 0.31
CTSD-205ENST00000438213 FAM126AQ9BYI3 521 aaPredicted RBP16.99■□□□□ 0.31
CTSD-205ENST00000438213 WDCPQ9H6R7 721 aa16.99■□□□□ 0.31
CTSD-205ENST00000438213 METTL5Q9NRN9 209 aaKnown RBP16.99■□□□□ 0.31
CTSD-205ENST00000438213 SLC8A2Q9UPR5 921 aa16.99■□□□□ 0.31
CTSD-205ENST00000438213 GOLGA6L7A0A1B0GV03 622 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 ANKRD62A6NC57 917 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 GYPCP04921 128 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 SERPING1P05155 500 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 CISD3P0C7P0 127 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 PDGFRAP16234 1089 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 CASP14P31944 242 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 SEC13P55735 322 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 GSCP56915 257 aaPredicted RBP16.98■□□□□ 0.31
CTSD-205ENST00000438213 DEUP1Q05D60 604 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 PTP4A2Q12974 167 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 E2F5Q15329 346 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 TSR1Q2NL82 804 aaKnown RBP16.98■□□□□ 0.31
CTSD-205ENST00000438213 C2orf27AQ580R0 203 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 TDRD12Q587J7 1177 aaKnown RBP16.98■□□□□ 0.31
CTSD-205ENST00000438213 FAM133BQ5BKY9 247 aaKnown RBP16.98■□□□□ 0.31
CTSD-205ENST00000438213 BRMS1LQ5PSV4 323 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 RFWD3Q6PCD5 774 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 MON1BQ7L1V2 547 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 PHLDB2Q86SQ0 1253 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 MCOLN2Q8IZK6 566 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 MAML2Q8IZL2 1156 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms