RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 RASA4O43374 803 aa26.57■■□□□ 1.84
CPNE1-216ENST00000437340 DPYSQ14117 519 aa26.57■■□□□ 1.84
CPNE1-216ENST00000437340 PAFAH1B3Q15102 231 aaKnown RBP26.57■■□□□ 1.84
CPNE1-216ENST00000437340 PKN2Q16513 984 aaKnown RBP26.57■■□□□ 1.84
CPNE1-216ENST00000437340 C4orf50Q6ZRC1 276 aa26.57■■□□□ 1.84
CPNE1-216ENST00000437340 FAM43BQ6ZT52 329 aaPredicted RBP26.57■■□□□ 1.84
CPNE1-216ENST00000437340 TRABD2AQ86V40 505 aa26.57■■□□□ 1.84
CPNE1-216ENST00000437340 CCDC110Q8TBZ0 833 aa26.57■■□□□ 1.84
CPNE1-216ENST00000437340 ZNF317Q96PQ6 595 aaPredicted RBP26.57■■□□□ 1.84
CPNE1-216ENST00000437340 RHOBTB2Q9BYZ6 727 aa26.57■■□□□ 1.84
CPNE1-216ENST00000437340 ETNK1Q9HBU6 452 aa26.57■■□□□ 1.84
CPNE1-216ENST00000437340 EEF2KO00418 725 aaKnown RBP26.56■■□□□ 1.84
CPNE1-216ENST00000437340 TPSB2P20231 275 aa26.56■■□□□ 1.84
CPNE1-216ENST00000437340 SSTR1P30872 391 aa26.56■■□□□ 1.84
CPNE1-216ENST00000437340 YWHAHQ04917 246 aaPredicted RBP26.56■■□□□ 1.84
CPNE1-216ENST00000437340 SEMA3BQ13214 749 aa26.56■■□□□ 1.84
CPNE1-216ENST00000437340 PDK1Q15118 436 aa26.56■■□□□ 1.84
CPNE1-216ENST00000437340 TPSAB1Q15661 275 aa26.56■■□□□ 1.84
CPNE1-216ENST00000437340 CLLU1OSQ5K130 101 aa26.56■■□□□ 1.84
CPNE1-216ENST00000437340 CAPN12Q6ZSI9 719 aa26.56■■□□□ 1.84
CPNE1-216ENST00000437340 RFX8Q6ZV50 586 aa26.56■■□□□ 1.84
CPNE1-216ENST00000437340 LRRTM3Q86VH5 581 aa26.56■■□□□ 1.84
CPNE1-216ENST00000437340 SRRM1Q8IYB3 904 aaKnown RBP26.56■■□□□ 1.84
CPNE1-216ENST00000437340 HTR3CQ8WXA8 447 aa26.56■■□□□ 1.84
CPNE1-216ENST00000437340 FERMT1Q9BQL6 677 aa26.56■■□□□ 1.84
CPNE1-216ENST00000437340 DDIT4Q9NX09 232 aa26.56■■□□□ 1.84
CPNE1-216ENST00000437340 RAD54BQ9Y620 910 aa26.56■■□□□ 1.84
CPNE1-216ENST00000437340 COL4A4P53420 1690 aaPredicted RBP26.56■■□□□ 1.84
CPNE1-216ENST00000437340 CREB1P16220 341 aa26.56■■□□□ 1.84
CPNE1-216ENST00000437340 ELK3P41970 407 aa26.56■■□□□ 1.84
CPNE1-216ENST00000437340 PDZD4Q76G19 769 aaPredicted RBP26.56■■□□□ 1.84
CPNE1-216ENST00000437340 COLGALT2Q8IYK4 626 aa26.56■■□□□ 1.84
CPNE1-216ENST00000437340 LRRC39Q96DD0 335 aa26.56■■□□□ 1.84
CPNE1-216ENST00000437340 DHRS4Q9BTZ2 278 aa26.56■■□□□ 1.84
CPNE1-216ENST00000437340 COLEC11Q9BWP8 271 aa26.56■■□□□ 1.84
CPNE1-216ENST00000437340 CREB3O43889 395 aa26.55■■□□□ 1.84
CPNE1-216ENST00000437340 MFSD11O43934 449 aa26.55■■□□□ 1.84
CPNE1-216ENST00000437340 DDHD2O94830 711 aa26.55■■□□□ 1.84
CPNE1-216ENST00000437340 GLUD2P49448 558 aa26.55■■□□□ 1.84
CPNE1-216ENST00000437340 MICALCLQ6ZW33 695 aa26.55■■□□□ 1.84
CPNE1-216ENST00000437340 TMEM209Q96SK2 561 aa26.55■■□□□ 1.84
CPNE1-216ENST00000437340 PRMT1Q99873 361 aaKnown RBP26.55■■□□□ 1.84
CPNE1-216ENST00000437340 FAM107BQ9H098 131 aa26.55■■□□□ 1.84
CPNE1-216ENST00000437340 KCNK9Q9NPC2 374 aa26.55■■□□□ 1.84
CPNE1-216ENST00000437340 TMPRSS4Q9NRS4 437 aa26.55■■□□□ 1.84
CPNE1-216ENST00000437340 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.55■■□□□ 1.84
CPNE1-216ENST00000437340 DCLK1O15075 740 aa26.54■■□□□ 1.84
CPNE1-216ENST00000437340 SELPP16109 830 aa26.54■■□□□ 1.84
CPNE1-216ENST00000437340 DRD4P21917 467 aa26.54■■□□□ 1.84
CPNE1-216ENST00000437340 CXCR3P49682 368 aa26.54■■□□□ 1.84
CPNE1-216ENST00000437340 ATN1P54259 1190 aaPredicted RBP26.54■■□□□ 1.84
CPNE1-216ENST00000437340 SEMA5AQ13591 1074 aa26.54■■□□□ 1.84
CPNE1-216ENST00000437340 PRKD1Q15139 912 aaPredicted RBP26.54■■□□□ 1.84
CPNE1-216ENST00000437340 BSPRYQ5W0U4 402 aa26.54■■□□□ 1.84
CPNE1-216ENST00000437340 ARHGEF18Q6ZSZ5 1173 aa26.54■■□□□ 1.84
CPNE1-216ENST00000437340 ZNF280BQ86YH2 543 aa26.54■■□□□ 1.84
CPNE1-216ENST00000437340 FBF1Q8TES7 1133 aa26.54■■□□□ 1.84
CPNE1-216ENST00000437340 TMEM161AQ9NX61 479 aa26.54■■□□□ 1.84
CPNE1-216ENST00000437340 CHMP2BQ9UQN3 213 aa26.54■■□□□ 1.84
CPNE1-216ENST00000437340 MFHAS1Q9Y4C4 1052 aa26.54■■□□□ 1.84
CPNE1-216ENST00000437340 ATXN2Q99700 1313 aaKnown RBP26.54■■□□□ 1.84
CPNE1-216ENST00000437340 A0A0A0MRY4 1105 aa26.53■■□□□ 1.84
CPNE1-216ENST00000437340 PPP1R12AO14974 1030 aaPredicted RBP26.53■■□□□ 1.84
CPNE1-216ENST00000437340 STK10O94804 968 aaKnown RBP26.53■■□□□ 1.84
CPNE1-216ENST00000437340 APRTP07741 180 aa26.53■■□□□ 1.84
CPNE1-216ENST00000437340 FDFT1P37268 417 aa26.53■■□□□ 1.84
CPNE1-216ENST00000437340 SLC18A1P54219 525 aa26.53■■□□□ 1.84
CPNE1-216ENST00000437340 ADGRD1Q6QNK2 874 aa26.53■■□□□ 1.84
CPNE1-216ENST00000437340 LRRC8DQ7L1W4 858 aa26.53■■□□□ 1.84
CPNE1-216ENST00000437340 CPLX4Q7Z7G2 160 aa26.53■■□□□ 1.84
CPNE1-216ENST00000437340 SRLQ86TD4 932 aa26.53■■□□□ 1.84
CPNE1-216ENST00000437340 SPATA2LQ8IUW3 424 aaPredicted RBP26.53■■□□□ 1.84
CPNE1-216ENST00000437340 ADAM32Q8TC27 787 aa26.53■■□□□ 1.84
CPNE1-216ENST00000437340 DIS3LQ8TF46 1054 aaKnown RBP26.53■■□□□ 1.84
CPNE1-216ENST00000437340 SPATA13Q96N96 652 aa26.53■■□□□ 1.84
CPNE1-216ENST00000437340 CYTH2Q99418 400 aa26.53■■□□□ 1.84
CPNE1-216ENST00000437340 ELAC1Q9H777 363 aaKnown RBP26.53■■□□□ 1.84
CPNE1-216ENST00000437340 TANC1Q9C0D5 1861 aa26.53■■□□□ 1.84
CPNE1-216ENST00000437340 B4GALT3O60512 393 aa26.53■■□□□ 1.84
CPNE1-216ENST00000437340 PQBP1O60828 265 aaKnown RBP26.53■■□□□ 1.84
CPNE1-216ENST00000437340 OAZ2O95190 189 aa26.53■■□□□ 1.84
CPNE1-216ENST00000437340 METTL18O95568 372 aa26.53■■□□□ 1.84
CPNE1-216ENST00000437340 VAV1P15498 845 aa26.53■■□□□ 1.84
CPNE1-216ENST00000437340 WDCPQ9H6R7 721 aa26.53■■□□□ 1.84
CPNE1-216ENST00000437340 TBC1D13Q9NVG8 400 aa26.53■■□□□ 1.84
CPNE1-216ENST00000437340 NKIRAS1Q9NYS0 192 aa26.53■■□□□ 1.84
CPNE1-216ENST00000437340 F8W810 466 aa26.52■■□□□ 1.84
CPNE1-216ENST00000437340 MAGEA3P43357 314 aa26.52■■□□□ 1.84
CPNE1-216ENST00000437340 CDK16Q00536 496 aa26.52■■□□□ 1.84
CPNE1-216ENST00000437340 FAXCQ5TGI0 409 aa26.52■■□□□ 1.84
CPNE1-216ENST00000437340 SLC39A5Q6ZMH5 540 aa26.52■■□□□ 1.84
CPNE1-216ENST00000437340 CAND1Q86VP6 1230 aaKnown RBP26.52■■□□□ 1.84
CPNE1-216ENST00000437340 IGDCC3Q8IVU1 814 aa26.52■■□□□ 1.84
CPNE1-216ENST00000437340 DYDC1Q8WWB3 177 aa26.52■■□□□ 1.84
CPNE1-216ENST00000437340 EDEM1Q92611 657 aa26.52■■□□□ 1.84
CPNE1-216ENST00000437340 FOXO6A8MYZ6 492 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 PRPF4O43172 522 aaKnown RBP eCLIP26.51■■□□□ 1.832e-8■□□□□ 11.3
CPNE1-216ENST00000437340 OPHN1O60890 802 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 GSTA2P09210 222 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 KRT15P19012 456 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms