RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 MGAQ8IWI9 3026 aa15.52■□□□□ 0.08
HDAC8-213ENST00000436675 SLC12A8A0AV02 714 aa15.52■□□□□ 0.08
HDAC8-213ENST00000436675 CD58P19256 250 aa15.52■□□□□ 0.08
HDAC8-213ENST00000436675 PIK3CAP42336 1068 aa15.52■□□□□ 0.08
HDAC8-213ENST00000436675 COG7P83436 770 aa15.52■□□□□ 0.08
HDAC8-213ENST00000436675 KNOP1Q1ED39 458 aaKnown RBP15.52■□□□□ 0.08
HDAC8-213ENST00000436675 C12orf56Q8IXR9 622 aa15.52■□□□□ 0.08
HDAC8-213ENST00000436675 ENGASEQ8NFI3 743 aa15.52■□□□□ 0.08
HDAC8-213ENST00000436675 IGSF8Q969P0 613 aa15.52■□□□□ 0.08
HDAC8-213ENST00000436675 PCED1AQ9H1Q7 454 aa15.52■□□□□ 0.08
HDAC8-213ENST00000436675 FAM47DPA6NHR8 397 aa15.51■□□□□ 0.07
HDAC8-213ENST00000436675 TLX3O43711 291 aaPredicted RBP15.51■□□□□ 0.07
HDAC8-213ENST00000436675 STX6O43752 255 aa15.51■□□□□ 0.07
HDAC8-213ENST00000436675 HLA-DRAP01903 254 aa15.51■□□□□ 0.07
HDAC8-213ENST00000436675 JUPP14923 745 aa15.51■□□□□ 0.07
HDAC8-213ENST00000436675 TRIM21P19474 475 aaKnown RBP15.51■□□□□ 0.07
HDAC8-213ENST00000436675 CTSKP43235 329 aa15.51■□□□□ 0.07
HDAC8-213ENST00000436675 AFMP43652 599 aa15.51■□□□□ 0.07
HDAC8-213ENST00000436675 GRIA4P48058 902 aa15.51■□□□□ 0.07
HDAC8-213ENST00000436675 PSEN1P49768 467 aa15.51■□□□□ 0.07
HDAC8-213ENST00000436675 CLDN10P78369 228 aa15.51■□□□□ 0.07
HDAC8-213ENST00000436675 EHHADHQ08426 723 aa15.51■□□□□ 0.07
HDAC8-213ENST00000436675 DNAJC3Q13217 504 aa15.51■□□□□ 0.07
HDAC8-213ENST00000436675 CAMK2GQ13555 558 aaPredicted RBP15.51■□□□□ 0.07
HDAC8-213ENST00000436675 EIF4HQ15056 248 aaKnown RBP15.51■□□□□ 0.07
HDAC8-213ENST00000436675 RSRC2Q7L4I2 434 aaKnown RBP15.51■□□□□ 0.07
HDAC8-213ENST00000436675 CCDC186Q7Z3E2 898 aa15.51■□□□□ 0.07
HDAC8-213ENST00000436675 IQUBQ8NA54 791 aa15.51■□□□□ 0.07
HDAC8-213ENST00000436675 ARID3AQ99856 593 aa15.51■□□□□ 0.07
HDAC8-213ENST00000436675 BTBD1Q9H0C5 482 aa15.51■□□□□ 0.07
HDAC8-213ENST00000436675 CUEDC2Q9H467 287 aa15.51■□□□□ 0.07
HDAC8-213ENST00000436675 FOXD4L1Q9NU39 408 aa15.51■□□□□ 0.07
HDAC8-213ENST00000436675 MARCH2Q9P0N8 246 aa15.51■□□□□ 0.07
HDAC8-213ENST00000436675 CGNQ9P2M7 1197 aaKnown RBP15.51■□□□□ 0.07
HDAC8-213ENST00000436675 AK5Q9Y6K8 562 aa15.51■□□□□ 0.07
HDAC8-213ENST00000436675 SPTLC2O15270 562 aa15.5■□□□□ 0.07
HDAC8-213ENST00000436675 PCDHGA12O60330 932 aa15.5■□□□□ 0.07
HDAC8-213ENST00000436675 ASS1P00966 412 aaKnown RBP15.5■□□□□ 0.07
HDAC8-213ENST00000436675 DNTTP04053 509 aa15.5■□□□□ 0.07
HDAC8-213ENST00000436675 RPN1P04843 607 aaKnown RBP15.5■□□□□ 0.07
HDAC8-213ENST00000436675 CD27P26842 260 aa15.5■□□□□ 0.07
HDAC8-213ENST00000436675 EIF2S3P41091 472 aaKnown RBP15.5■□□□□ 0.07
HDAC8-213ENST00000436675 C21orf59P57076 290 aa15.5■□□□□ 0.07
HDAC8-213ENST00000436675 RPS14P62263 151 aaKnown RBP15.5■□□□□ 0.07
HDAC8-213ENST00000436675 E2F5Q15329 346 aa15.5■□□□□ 0.07
HDAC8-213ENST00000436675 ZACNQ401N2 412 aa15.5■□□□□ 0.07
HDAC8-213ENST00000436675 ZNF394Q53GI3 561 aa15.5■□□□□ 0.07
HDAC8-213ENST00000436675 PPP1R26Q5T8A7 1209 aaPredicted RBP15.5■□□□□ 0.07
HDAC8-213ENST00000436675 LRRC69Q6ZNQ3 347 aa15.5■□□□□ 0.07
HDAC8-213ENST00000436675 SV2AQ7L0J3 742 aa15.5■□□□□ 0.07
HDAC8-213ENST00000436675 CHST9Q7L1S5 443 aa15.5■□□□□ 0.07
HDAC8-213ENST00000436675 TMPRSS12Q86WS5 348 aa15.5■□□□□ 0.07
HDAC8-213ENST00000436675 LINC00301Q8NCQ3 95 aa15.5■□□□□ 0.07
HDAC8-213ENST00000436675 GANCQ8TET4 914 aa15.5■□□□□ 0.07
HDAC8-213ENST00000436675 NXPE2Q96DL1 559 aa15.5■□□□□ 0.07
HDAC8-213ENST00000436675 NT5C1AQ9BXI3 368 aa15.5■□□□□ 0.07
HDAC8-213ENST00000436675 DUSP16Q9BY84 665 aa15.5■□□□□ 0.07
HDAC8-213ENST00000436675 MTG2Q9H4K7 406 aa15.5■□□□□ 0.07
HDAC8-213ENST00000436675 CLIC5Q9NZA1 410 aa15.5■□□□□ 0.07
HDAC8-213ENST00000436675 ENC1O14682 589 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 ATXN7O15265 892 aaPredicted RBP15.49■□□□□ 0.07
HDAC8-213ENST00000436675 POLR2DO15514 142 aaKnown RBP15.49■□□□□ 0.07
HDAC8-213ENST00000436675 TIMM44O43615 452 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 HLA-FP30511 346 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 NASPP49321 788 aaPredicted RBP15.49■□□□□ 0.07
HDAC8-213ENST00000436675 BCAT1P54687 386 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 CUL4AQ13619 759 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 CUL4BQ13620 913 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 INAVAQ3KP66 663 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 CNNM4Q6P4Q7 775 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 SHC4Q6S5L8 630 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 GRAMD1CQ8IYS0 662 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 CPXM2Q8N436 756 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 NDRG1Q92597 394 aaKnown RBP15.49■□□□□ 0.07
HDAC8-213ENST00000436675 TAF4BQ92750 862 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 SLC6A18Q96N87 628 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 CDK5RAP1Q96SZ6 601 aaKnown RBP15.49■□□□□ 0.07
HDAC8-213ENST00000436675 SLC2A11Q9BYW1 496 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 TMEM245Q9H330 911 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 PRORYQ9H606 182 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 APOBEC3GQ9HC16 384 aaKnown RBP15.49■□□□□ 0.07
HDAC8-213ENST00000436675 PNPLA8Q9NP80 782 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 OSGEPQ9NPF4 335 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 PRSS16Q9NQE7 514 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 ABCB8Q9NUT2 735 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 STRIP2Q9ULQ0 834 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 PLA2G4CQ9UP65 541 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 MTMR6Q9Y217 621 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 USP3Q9Y6I4 520 aa15.49■□□□□ 0.07
HDAC8-213ENST00000436675 MORC2Q9Y6X9 1032 aaPredicted RBP15.49■□□□□ 0.07
HDAC8-213ENST00000436675 A0A1B0GTQ1 180 aa15.48■□□□□ 0.07
HDAC8-213ENST00000436675 E9PAM4 449 aa15.48■□□□□ 0.07
HDAC8-213ENST00000436675 LDOC1O95751 146 aaPredicted RBP15.48■□□□□ 0.07
HDAC8-213ENST00000436675 HOXD9P28356 352 aaPredicted RBP15.48■□□□□ 0.07
HDAC8-213ENST00000436675 YWHAGP61981 247 aaKnown RBP eCLIP15.48■□□□□ 0.07
HDAC8-213ENST00000436675 INCA1Q0VD86 236 aa15.48■□□□□ 0.07
HDAC8-213ENST00000436675 TARDBPQ13148 414 aaKnown RBP eCLIP15.48■□□□□ 0.07
HDAC8-213ENST00000436675 MPPE1Q53F39 396 aa15.48■□□□□ 0.07
HDAC8-213ENST00000436675 C6orf118Q5T5N4 469 aa15.48■□□□□ 0.07
HDAC8-213ENST00000436675 CEP135Q66GS9 1140 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms