RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 PCDHB1Q9Y5F3 818 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 SNX9Q9Y5X1 595 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 BLACEA4D250 179 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 CLIC2O15247 247 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 MT-CO3P00414 261 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 ABL1P00519 1130 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 IGLV3-19P01714 112 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 HSP90AA1P07900 732 aaKnown RBP10.99□□□□□ -0.65
CPNE1-214ENST00000435747 TMEM191BP0C7N4 346 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 ACAT1P24752 427 aaKnown RBP10.99□□□□□ -0.65
CPNE1-214ENST00000435747 LMO2P25791 158 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 AFMP43652 599 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 MYL7Q01449 175 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 SURF1Q15526 300 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 KNOP1Q1ED39 458 aaKnown RBP10.99□□□□□ -0.65
CPNE1-214ENST00000435747 DUOXA2Q1HG44 320 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 KCNT1Q5JUK3 1230 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 HIST2H2BCQ6DN03 193 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 TRAPPC11Q7Z392 1133 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 TMPRSS6Q8IU80 811 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 SPATA2LQ8IUW3 424 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-214ENST00000435747 NELFCDQ8IXH7 590 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 ADGRF2Q8IZF7 708 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 MMS19Q96T76 1030 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 ELF4Q99607 663 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-214ENST00000435747 CGRRF1Q99675 332 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 XYLT2Q9H1B5 865 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 KCTD10Q9H3F6 313 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 C6orf106Q9H6K1 298 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-214ENST00000435747 LRRC4CQ9HCJ2 640 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 CRTAC1Q9NQ79 661 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 SPHK2Q9NRA0 654 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 FAM13BQ9NYF5 915 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 GTF3C4Q9UKN8 822 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 SSUH2Q9Y2M2 353 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-214ENST00000435747 CKAP5Q14008 2032 aa10.99□□□□□ -0.65
CPNE1-214ENST00000435747 A0A1B0GVL5 298 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 CLEC18AA5D8T8 446 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 ZNF840PA6NDX5 716 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 PRRT4C9JH25 899 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 HUS1O60921 280 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 ATP2C2O75185 946 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 STAU1O95793 577 aaKnown RBP10.98□□□□□ -0.65
CPNE1-214ENST00000435747 OLFM2O95897 454 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 CKMT2P17540 419 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 WARSP23381 471 aaKnown RBP10.98□□□□□ -0.65
CPNE1-214ENST00000435747 LHX1P48742 406 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 LINC00303Q3SY05 128 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 SGO2Q562F6 1265 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 PRAMEF14Q5SWL7 426 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 CLEC18BQ6UXF7 455 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 CACUL1Q86Y37 369 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 TMEM25Q86YD3 366 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 SLC9A9Q8IVB4 645 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 FAM26EQ8N5C1 309 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 XXYLT1Q8NBI6 393 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 CLEC18CQ8NCF0 446 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 FUBP3Q96I24 572 aaKnown RBP eCLIP10.98□□□□□ -0.65
CPNE1-214ENST00000435747 HPDLQ96IR7 371 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 ANKRD36BP1Q96IX9 119 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 XPO6Q96QU8 1125 aaKnown RBP10.98□□□□□ -0.65
CPNE1-214ENST00000435747 ACE2Q9BYF1 805 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-214ENST00000435747 CGNQ9P2M7 1197 aaKnown RBP10.98□□□□□ -0.65
CPNE1-214ENST00000435747 SH3BP1Q9Y3L3 701 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 STON1Q9Y6Q2 735 aa10.98□□□□□ -0.65
CPNE1-214ENST00000435747 YKT6O15498 198 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 SYNCRIPO60506 623 aaKnown RBP10.97□□□□□ -0.65
CPNE1-214ENST00000435747 TACC1O75410 805 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 OAS1P00973 400 aaKnown RBP10.97□□□□□ -0.65
CPNE1-214ENST00000435747 MYL1P05976 194 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 KRT19P08727 400 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 FAM163BP0C2L3 166 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 SFTPCP11686 197 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 ITGB6P18564 788 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 MAGEA11P43364 429 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 LSSP48449 732 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 PPP3CCP48454 512 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 CYP2J2P51589 502 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 ZNF132P52740 706 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 MCCD1P59942 119 aaPredicted RBP10.97□□□□□ -0.65
CPNE1-214ENST00000435747 E2F1Q01094 437 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 KMT5BQ4FZB7 885 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 C1orf220Q5T0J3 134 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 DENND5BQ6ZUT9 1274 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 RDH13Q8NBN7 331 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 SAP25Q8TEE9 199 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 PARD3BQ8TEW8 1205 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 CCDC97Q96F63 343 aaPredicted RBP10.97□□□□□ -0.65
CPNE1-214ENST00000435747 SPATA17Q96L03 361 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 MRPL45Q9BRJ2 306 aaKnown RBP10.97□□□□□ -0.65
CPNE1-214ENST00000435747 GOLPH3LQ9H4A5 285 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 VRTNQ9H8Y1 702 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 POLR1BQ9H9Y6 1135 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 ASCL3Q9NQ33 180 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 TMEM30AQ9NV96 361 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 EHD2Q9NZN4 543 aa10.97□□□□□ -0.65
CPNE1-214ENST00000435747 PLXNA2O75051 1894 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 A0A1W2PQ27 194 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 A0A1W2PQ64 194 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms