RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 MED10Q9BTT4 135 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 POPDC2Q9HBU9 364 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 MTMR10Q9NXD2 777 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 DDX43Q9NXZ2 648 aaKnown RBP12.35□□□□□ -0.43
CTCFL-209ENST00000433949 TEX264Q9Y6I9 313 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 ANKRD65E5RJM6 399 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 GSTA2P09210 222 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 SKIP12755 728 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 TFE3P19532 575 aaPredicted RBP12.35□□□□□ -0.43
CTCFL-209ENST00000433949 PCSK1P29120 753 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 MSH2P43246 934 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 ADCY1Q08828 1119 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 SPARCL1Q14515 664 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 DCAF6Q58WW2 860 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 NUGGCQ68CJ6 796 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 HEATR6Q6AI08 1181 aaKnown RBP12.35□□□□□ -0.43
CTCFL-209ENST00000433949 GLB1LQ6UWU2 654 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 CAPN12Q6ZSI9 719 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 BNIPLQ7Z465 357 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 FBF1Q8TES7 1133 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 HASPINQ8TF76 798 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 APBB2Q92870 758 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 TGS1Q96RS0 853 aaKnown RBP12.35□□□□□ -0.43
CTCFL-209ENST00000433949 NPY6RQ99463 290 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 PAFAH2Q99487 392 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 PNPLA8Q9NP80 782 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 ETNK2Q9NVF9 386 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 RRN3Q9NYV6 651 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 HCSTQ9UBK5 93 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 CDH9Q9ULB4 789 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 FZD10Q9ULW2 581 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 IKBKGQ9Y6K9 419 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 TCP11X1B4DZS4 312 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 F8W810 466 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 SNX3O60493 162 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 TPSB2P20231 275 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 CLCNKBP51801 687 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 FAM189BP81408 668 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 GAD2Q05329 585 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 MPP2Q14168 576 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 TPSAB1Q15661 275 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 LACTB2Q53H82 288 aaPredicted RBP12.34□□□□□ -0.43
CTCFL-209ENST00000433949 MDH1BQ5I0G3 518 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 PAQR9Q6ZVX9 377 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 ZNF280BQ86YH2 543 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 ABI1Q8IZP0 508 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 CNPY4Q8N129 248 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 QKIQ96PU8 341 aaKnown RBP eCLIP12.34□□□□□ -0.43
CTCFL-209ENST00000433949 SLC2A13Q96QE2 648 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 KCTD15Q96SI1 283 aaPredicted RBP12.34□□□□□ -0.43
CTCFL-209ENST00000433949 ELAC2Q9BQ52 826 aaKnown RBP12.34□□□□□ -0.43
CTCFL-209ENST00000433949 SYT15Q9BQS2 421 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 CNGB3Q9NQW8 809 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 IQANK1A0A1B0GTG1 560 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 ZBBXA8MT70 800 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 H3BRJ5 948 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 ATP2C2O75185 946 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 BANF1O75531 89 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 SUN1O94901 812 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 ZWINTO95229 277 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 EOMESO95936 686 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 ELK3P41970 407 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 SARNPP82979 210 aaKnown RBP12.34□□□□□ -0.43
CTCFL-209ENST00000433949 CDK16Q00536 496 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 CNKSR3Q6P9H4 555 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 DSTYKQ6XUX3 929 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 RGS9BPQ6ZS82 235 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 MICALL1Q8N3F8 863 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 CCDC185Q8N715 623 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 WDR83Q9BRX9 315 aaKnown RBP12.34□□□□□ -0.43
CTCFL-209ENST00000433949 KRT82Q9NSB4 513 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 TMEM161AQ9NX61 479 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 CHMP2BQ9UQN3 213 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 USP3Q9Y6I4 520 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 PTPRDP23468 1912 aa12.34□□□□□ -0.43
CTCFL-209ENST00000433949 ARHGEF37A1IGU5 675 aa12.33□□□□□ -0.44
CTCFL-209ENST00000433949 TRDMT1O14717 391 aaKnown RBP12.33□□□□□ -0.44
CTCFL-209ENST00000433949 B4GALT3O60512 393 aa12.33□□□□□ -0.44
CTCFL-209ENST00000433949 STK10O94804 968 aaKnown RBP12.33□□□□□ -0.44
CTCFL-209ENST00000433949 PARNO95453 639 aaKnown RBP12.33□□□□□ -0.44
CTCFL-209ENST00000433949 ASMTLO95671 621 aa12.33□□□□□ -0.44
CTCFL-209ENST00000433949 CA4P22748 312 aa12.33□□□□□ -0.44
CTCFL-209ENST00000433949 ACAT1P24752 427 aaKnown RBP12.33□□□□□ -0.44
CTCFL-209ENST00000433949 LIG3P49916 1009 aa12.33□□□□□ -0.44
CTCFL-209ENST00000433949 TKTL1P51854 596 aa12.33□□□□□ -0.44
CTCFL-209ENST00000433949 ZNF135P52742 658 aaPredicted RBP12.33□□□□□ -0.44
CTCFL-209ENST00000433949 DEFB103AP81534 67 aa12.33□□□□□ -0.44
CTCFL-209ENST00000433949 NCBP2-AS2Q69YL0 99 aa12.33□□□□□ -0.44
CTCFL-209ENST00000433949 KCNT2Q6UVM3 1135 aa12.33□□□□□ -0.44
CTCFL-209ENST00000433949 C16orf59Q7L2K0 433 aa12.33□□□□□ -0.44
CTCFL-209ENST00000433949 TAB3Q8N5C8 712 aaPredicted RBP12.33□□□□□ -0.44
CTCFL-209ENST00000433949 DENND1AQ8TEH3 1009 aa12.33□□□□□ -0.44
CTCFL-209ENST00000433949 TFB1MQ8WVM0 346 aaKnown RBP12.33□□□□□ -0.44
CTCFL-209ENST00000433949 CCT6BQ92526 530 aa12.33□□□□□ -0.44
CTCFL-209ENST00000433949 NTAN1Q96AB6 310 aa12.33□□□□□ -0.44
CTCFL-209ENST00000433949 OLFM3Q96PB7 478 aa12.33□□□□□ -0.44
CTCFL-209ENST00000433949 ADAM33Q9BZ11 813 aa12.33□□□□□ -0.44
CTCFL-209ENST00000433949 XAB2Q9HCS7 855 aaKnown RBP12.33□□□□□ -0.44
CTCFL-209ENST00000433949 USP15Q9Y4E8 981 aaPredicted RBP12.33□□□□□ -0.44
CTCFL-209ENST00000433949 TCRBV9S1A1TA0A576 114 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms