RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 FAF2Q96CS3 445 aa18.91■□□□□ 0.62
HMGN1-206ENST00000431390 ZNF512Q96ME7 567 aaPredicted RBP18.91■□□□□ 0.62
HMGN1-206ENST00000431390 PLEKHA4Q9H4M7 779 aa18.91■□□□□ 0.62
HMGN1-206ENST00000431390 SLITRK6Q9H5Y7 841 aa18.91■□□□□ 0.62
HMGN1-206ENST00000431390 HOMER3Q9NSC5 361 aa18.91■□□□□ 0.62
HMGN1-206ENST00000431390 ARHGEF38Q9NXL2 777 aa18.91■□□□□ 0.62
HMGN1-206ENST00000431390 TRPM5Q9NZQ8 1165 aa18.91■□□□□ 0.62
HMGN1-206ENST00000431390 SFMBT1Q9UHJ3 866 aa18.91■□□□□ 0.62
HMGN1-206ENST00000431390 TLR6Q9Y2C9 796 aa18.91■□□□□ 0.62
HMGN1-206ENST00000431390 ANAPC1Q9H1A4 1944 aa18.91■□□□□ 0.62
HMGN1-206ENST00000431390 ZNF840PA6NDX5 716 aa18.9■□□□□ 0.62
HMGN1-206ENST00000431390 TLR5O60602 858 aa18.9■□□□□ 0.62
HMGN1-206ENST00000431390 CCR1P32246 355 aa18.9■□□□□ 0.62
HMGN1-206ENST00000431390 TUBP50607 506 aa18.9■□□□□ 0.62
HMGN1-206ENST00000431390 ZNF135P52742 658 aaPredicted RBP18.9■□□□□ 0.62
HMGN1-206ENST00000431390 LLGL1Q15334 1064 aa18.9■□□□□ 0.62
HMGN1-206ENST00000431390 KAZNQ674X7 775 aa18.9■□□□□ 0.62
HMGN1-206ENST00000431390 KLHDC10Q6PID8 442 aa18.9■□□□□ 0.62
HMGN1-206ENST00000431390 EP400NLQ6ZTU2 488 aa18.9■□□□□ 0.62
HMGN1-206ENST00000431390 BBS12Q6ZW61 710 aa18.9■□□□□ 0.62
HMGN1-206ENST00000431390 ALYREFQ86V81 257 aaKnown RBP18.9■□□□□ 0.62
HMGN1-206ENST00000431390 HDAC7Q8WUI4 952 aa18.9■□□□□ 0.62
HMGN1-206ENST00000431390 TSC1Q92574 1164 aa18.9■□□□□ 0.62
HMGN1-206ENST00000431390 RNF34Q969K3 372 aa18.9■□□□□ 0.62
HMGN1-206ENST00000431390 RUNDC3BQ96NL0 473 aa18.9■□□□□ 0.62
HMGN1-206ENST00000431390 KCTD15Q96SI1 283 aaPredicted RBP18.9■□□□□ 0.62
HMGN1-206ENST00000431390 KRT12Q99456 494 aa18.9■□□□□ 0.62
HMGN1-206ENST00000431390 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.9■□□□□ 0.62
HMGN1-206ENST00000431390 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.9■□□□□ 0.62
HMGN1-206ENST00000431390 NUDT5Q9UKK9 219 aa18.9■□□□□ 0.62
HMGN1-206ENST00000431390 V9GYY5 206 aaPredicted RBP18.9■□□□□ 0.62
HMGN1-206ENST00000431390 MYO7AQ13402 2215 aa18.9■□□□□ 0.62
HMGN1-206ENST00000431390 OBSL1O75147 1896 aa18.9■□□□□ 0.62
HMGN1-206ENST00000431390 CLASP2O75122 1294 aaKnown RBP18.89■□□□□ 0.62
HMGN1-206ENST00000431390 CSPG5O95196 566 aa18.89■□□□□ 0.62
HMGN1-206ENST00000431390 SLC2A3P11169 496 aa18.89■□□□□ 0.62
HMGN1-206ENST00000431390 IL4RP24394 825 aa18.89■□□□□ 0.62
HMGN1-206ENST00000431390 CHRNA3P32297 505 aa18.89■□□□□ 0.62
HMGN1-206ENST00000431390 TFDP2Q14188 446 aa18.89■□□□□ 0.62
HMGN1-206ENST00000431390 TCEAL5Q5H9L2 206 aa18.89■□□□□ 0.62
HMGN1-206ENST00000431390 PPP6R3Q5H9R7 873 aaPredicted RBP18.89■□□□□ 0.62
HMGN1-206ENST00000431390 C10orf120Q5SQS8 335 aa18.89■□□□□ 0.62
HMGN1-206ENST00000431390 RFX6Q8HWS3 928 aa18.89■□□□□ 0.62
HMGN1-206ENST00000431390 KLHL7Q8IXQ5 586 aa18.89■□□□□ 0.62
HMGN1-206ENST00000431390 ELMOD1Q8N336 334 aa18.89■□□□□ 0.62
HMGN1-206ENST00000431390 SLC39A13Q96H72 371 aa18.89■□□□□ 0.62
HMGN1-206ENST00000431390 RNF157Q96PX1 679 aa18.89■□□□□ 0.62
HMGN1-206ENST00000431390 MAK16Q9BXY0 300 aaKnown RBP18.89■□□□□ 0.62
HMGN1-206ENST00000431390 TKTL2Q9H0I9 626 aa18.89■□□□□ 0.62
HMGN1-206ENST00000431390 DDX47Q9H0S4 455 aaKnown RBP18.89■□□□□ 0.62
HMGN1-206ENST00000431390 LRRC19Q9H756 370 aa18.89■□□□□ 0.62
HMGN1-206ENST00000431390 PRDM16Q9HAZ2 1276 aa18.89■□□□□ 0.62
HMGN1-206ENST00000431390 MSI1O43347 362 aaKnown RBP18.89■□□□□ 0.61
HMGN1-206ENST00000431390 CST8O60676 142 aa18.89■□□□□ 0.61
HMGN1-206ENST00000431390 ALADP13716 330 aa18.89■□□□□ 0.61
HMGN1-206ENST00000431390 ARL4AP40617 200 aa18.89■□□□□ 0.61
HMGN1-206ENST00000431390 FNTAP49354 379 aa18.89■□□□□ 0.61
HMGN1-206ENST00000431390 KPNA1P52294 538 aaPredicted RBP18.89■□□□□ 0.61
HMGN1-206ENST00000431390 ADCY2Q08462 1091 aa18.89■□□□□ 0.61
HMGN1-206ENST00000431390 EFEMP1Q12805 493 aa18.89■□□□□ 0.61
HMGN1-206ENST00000431390 MMRN1Q13201 1228 aa18.89■□□□□ 0.61
HMGN1-206ENST00000431390 TRIP4Q15650 581 aaPredicted RBP18.89■□□□□ 0.61
HMGN1-206ENST00000431390 PUS10Q3MIT2 529 aaKnown RBP18.89■□□□□ 0.61
HMGN1-206ENST00000431390 PABPC1LQ4VXU2 614 aaKnown RBP18.89■□□□□ 0.61
HMGN1-206ENST00000431390 ANKRD20A8PQ5CZ79 823 aa18.89■□□□□ 0.61
HMGN1-206ENST00000431390 PPM1LQ5SGD2 360 aa18.89■□□□□ 0.61
HMGN1-206ENST00000431390 HECTD3Q5T447 861 aa18.89■□□□□ 0.61
HMGN1-206ENST00000431390 C8orf74Q6P047 294 aa18.89■□□□□ 0.61
HMGN1-206ENST00000431390 GPR161Q8N6U8 529 aaKnown RBP18.89■□□□□ 0.61
HMGN1-206ENST00000431390 TTC13Q8NBP0 860 aa18.89■□□□□ 0.61
HMGN1-206ENST00000431390 MAGOHBQ96A72 148 aaKnown RBP18.89■□□□□ 0.61
HMGN1-206ENST00000431390 HAPLN3Q96S86 360 aa18.89■□□□□ 0.61
HMGN1-206ENST00000431390 CCSER2Q9H7U1 834 aa18.89■□□□□ 0.61
HMGN1-206ENST00000431390 MARCH2Q9P0N8 246 aa18.89■□□□□ 0.61
HMGN1-206ENST00000431390 DPP7Q9UHL4 492 aa18.89■□□□□ 0.61
HMGN1-206ENST00000431390 DENND4CQ5VZ89 1909 aa18.88■□□□□ 0.61
HMGN1-206ENST00000431390 H3BRJ5 948 aa18.88■□□□□ 0.61
HMGN1-206ENST00000431390 HOXA9P31269 272 aa18.88■□□□□ 0.61
HMGN1-206ENST00000431390 TBX4P57082 545 aa18.88■□□□□ 0.61
HMGN1-206ENST00000431390 SEMA3BQ13214 749 aa18.88■□□□□ 0.61
HMGN1-206ENST00000431390 MTA1Q13330 715 aa18.88■□□□□ 0.61
HMGN1-206ENST00000431390 CCNG2Q16589 344 aa18.88■□□□□ 0.61
HMGN1-206ENST00000431390 CCDC26Q8TAB7 109 aa18.88■□□□□ 0.61
HMGN1-206ENST00000431390 SLC22A17Q8WUG5 538 aa18.88■□□□□ 0.61
HMGN1-206ENST00000431390 PABPC5Q96DU9 382 aaKnown RBP18.88■□□□□ 0.61
HMGN1-206ENST00000431390 FRMD8P1Q9BZ68 369 aaPredicted RBP18.88■□□□□ 0.61
HMGN1-206ENST00000431390 DCLK3Q9C098 648 aa18.88■□□□□ 0.61
HMGN1-206ENST00000431390 OSBPL2Q9H1P3 480 aa18.88■□□□□ 0.61
HMGN1-206ENST00000431390 IL21Q9HBE4 155 aa18.88■□□□□ 0.61
HMGN1-206ENST00000431390 ANLNQ9NQW6 1124 aa18.88■□□□□ 0.61
HMGN1-206ENST00000431390 PCYOX1Q9UHG3 505 aa18.88■□□□□ 0.61
HMGN1-206ENST00000431390 RASAL2Q9UJF2 1139 aa18.88■□□□□ 0.61
HMGN1-206ENST00000431390 DNMT3LQ9UJW3 386 aa18.88■□□□□ 0.61
HMGN1-206ENST00000431390 TARSL2A2RTX5 802 aaKnown RBP18.87■□□□□ 0.61
HMGN1-206ENST00000431390 KCNU1A8MYU2 1149 aa18.87■□□□□ 0.61
HMGN1-206ENST00000431390 I6L893 689 aaPredicted RBP18.87■□□□□ 0.61
HMGN1-206ENST00000431390 ZMYND10O75800 440 aa18.87■□□□□ 0.61
HMGN1-206ENST00000431390 IGLV3-27P01718 113 aa18.87■□□□□ 0.61
HMGN1-206ENST00000431390 F11P03951 625 aa18.87■□□□□ 0.61
HMGN1-206ENST00000431390 ATP5C1P36542 298 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms