RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 RHBDF2Q6PJF5 856 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 ATPAF2Q8N5M1 289 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 MAB21L3Q8N8X9 362 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 C7orf43Q8WVR3 580 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 CRYGNQ8WXF5 182 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 ECSITQ9BQ95 431 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 DDX18Q9NVP1 670 aaKnown RBP12.98□□□□□ -0.33
CPNE4-201ENST00000429747 IL1RAPL1Q9NZN1 696 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 CPSF3Q9UKF6 684 aaKnown RBP12.98□□□□□ -0.33
CPNE4-201ENST00000429747 MRPL42Q9Y6G3 142 aaKnown RBP12.98□□□□□ -0.33
CPNE4-201ENST00000429747 GFAPP14136 432 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 PTPRAP18433 802 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 ACO1P21399 889 aaKnown RBP12.98□□□□□ -0.33
CPNE4-201ENST00000429747 SP100P23497 879 aaPredicted RBP12.98□□□□□ -0.33
CPNE4-201ENST00000429747 NAPEPLDQ6IQ20 393 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 UNC5AQ6ZN44 842 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 MFN1Q8IWA4 741 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 LGMNQ99538 433 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 ANGPTL3Q9Y5C1 460 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 ANGPT2O15123 496 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 GSTA4O15217 222 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 DYNC1LI2O43237 492 aaPredicted RBP12.98□□□□□ -0.33
CPNE4-201ENST00000429747 IL10P22301 178 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 PTK2BQ14289 1009 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 SNRNP27Q8WVK2 155 aaKnown RBP12.98□□□□□ -0.33
CPNE4-201ENST00000429747 COPS5Q92905 334 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 SPATC1LQ9H0A9 340 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 ASCC2Q9H1I8 757 aaPredicted RBP12.98□□□□□ -0.33
CPNE4-201ENST00000429747 PNPOQ9NVS9 261 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 SNTG2Q9NY99 539 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 PKD1L3Q7Z443 1732 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 MYH3P11055 1940 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 KDM4FA0A1W2PPD8 638 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 LIN7AO14910 233 aaPredicted RBP12.97□□□□□ -0.33
CPNE4-201ENST00000429747 TGFB3P10600 412 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 PSMB4P28070 264 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 NUMBP49757 651 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 YWHAZP63104 245 aaKnown RBP12.97□□□□□ -0.33
CPNE4-201ENST00000429747 ROR2Q01974 943 aaKnown RBP12.97□□□□□ -0.33
CPNE4-201ENST00000429747 EML3Q32P44 896 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 MSS51Q4VC12 460 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 DRICH1Q6PGQ1 229 aaPredicted RBP12.97□□□□□ -0.33
CPNE4-201ENST00000429747 OR6Y1Q8NGX8 325 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 THAP11Q96EK4 314 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 ASB7Q9H672 318 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 EML4Q9HC35 981 aaKnown RBP12.97□□□□□ -0.33
CPNE4-201ENST00000429747 CLIC5Q9NZA1 410 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 PLA2G4CQ9UP65 541 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 EFR3BQ9Y2G0 817 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 ZBBXA8MT70 800 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 PFDN6O15212 129 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 PHGDHO43175 533 aaKnown RBP12.97□□□□□ -0.33
CPNE4-201ENST00000429747 PEX10O60683 326 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 CD4P01730 458 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 BPGMP07738 259 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 PGAM1P18669 254 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 GPX6P59796 221 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 PLOD1Q02809 727 aaPredicted RBP12.97□□□□□ -0.33
CPNE4-201ENST00000429747 USP4Q13107 963 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 OASLQ15646 514 aaKnown RBP12.97□□□□□ -0.33
CPNE4-201ENST00000429747 CMC1Q7Z7K0 106 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 DHDDSQ86SQ9 333 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 XYLT1Q86Y38 959 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 DEFB106AQ8N104 65 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 BBS5Q8N3I7 341 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 OR6J1Q8NGC5 347 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 SLC35B2Q8TB61 432 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 PABPC5Q96DU9 382 aaKnown RBP12.97□□□□□ -0.33
CPNE4-201ENST00000429747 FBXL18Q96ME1 805 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 COPS7BQ9H9Q2 264 aaPredicted RBP12.97□□□□□ -0.33
CPNE4-201ENST00000429747 SARS2Q9NP81 518 aaKnown RBP12.97□□□□□ -0.33
CPNE4-201ENST00000429747 V9GYQ6 96 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 NFASCO94856 1347 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 MYH7BA7E2Y1 1941 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 SPDYE16A6NNV3 312 aaPredicted RBP12.97□□□□□ -0.33
CPNE4-201ENST00000429747 TBX10O75333 385 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 MAFO75444 373 aaPredicted RBP12.97□□□□□ -0.33
CPNE4-201ENST00000429747 SERPINA6P08185 405 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 ACAT1P24752 427 aaKnown RBP12.97□□□□□ -0.33
CPNE4-201ENST00000429747 IL1R2P27930 398 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 MSX2P35548 267 aaPredicted RBP12.97□□□□□ -0.33
CPNE4-201ENST00000429747 TAF6P49848 677 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 OAZ1P54368 228 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 HDAC4P56524 1084 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 NME5P56597 212 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 OGDHQ02218 1023 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 GBE1Q04446 702 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 BST2Q10589 180 aaKnown RBP12.97□□□□□ -0.33
CPNE4-201ENST00000429747 DGKDQ16760 1214 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 LPCAT4Q643R3 524 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 ZSCAN18Q8TBC5 510 aaPredicted RBP12.97□□□□□ -0.33
CPNE4-201ENST00000429747 CYGBQ8WWM9 190 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 CELF6Q96J87 481 aaKnown RBP12.97□□□□□ -0.33
CPNE4-201ENST00000429747 B3GNT5Q9BYG0 378 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 TSPYL2Q9H2G4 693 aaPredicted RBP12.97□□□□□ -0.33
CPNE4-201ENST00000429747 BTBD7Q9P203 1132 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 ACOT9Q9Y305 439 aa12.97□□□□□ -0.33
CPNE4-201ENST00000429747 SPDYE5A6NIY4 337 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 SMNDC1O75940 238 aaKnown RBP eCLIP12.96□□□□□ -0.33
CPNE4-201ENST00000429747 FAM200BP0CF97 657 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms