RNA–Protein interactions for RNA: ENST00000429035.1

SDC1-204, Transcript of syndecan 1, humanhuman

TSL 3

Gene SDC1, Length 646 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-204ENST00000429035 RDXP35241 583 aaKnown RBP15.16■□□□□ 0.02
SDC1-204ENST00000429035 RGS7P49802 495 aa15.16■□□□□ 0.02
SDC1-204ENST00000429035 PMS1P54277 932 aaKnown RBP15.16■□□□□ 0.02
SDC1-204ENST00000429035 EIF4HQ15056 248 aaKnown RBP15.16■□□□□ 0.02
SDC1-204ENST00000429035 MPPE1Q53F39 396 aa15.16■□□□□ 0.02
SDC1-204ENST00000429035 ZNF658Q5TYW1 1059 aaPredicted RBP15.16■□□□□ 0.02
SDC1-204ENST00000429035 DCAF12L1Q5VU92 463 aa15.16■□□□□ 0.02
SDC1-204ENST00000429035 PIP4P1Q86T03 277 aa15.16■□□□□ 0.02
SDC1-204ENST00000429035 ZNF366Q8N895 744 aa15.16■□□□□ 0.02
SDC1-204ENST00000429035 CYB5D2Q8WUJ1 264 aa15.16■□□□□ 0.02
SDC1-204ENST00000429035 SMARCE1Q969G3 411 aa15.16■□□□□ 0.02
SDC1-204ENST00000429035 ZNF419Q96HQ0 510 aaPredicted RBP15.16■□□□□ 0.02
SDC1-204ENST00000429035 CAMK1GQ96NX5 476 aa15.16■□□□□ 0.02
SDC1-204ENST00000429035 UBXN6Q9BZV1 441 aa15.16■□□□□ 0.02
SDC1-204ENST00000429035 USP36Q9P275 1121 aaKnown RBP15.16■□□□□ 0.02
SDC1-204ENST00000429035 ARMCX3Q9UH62 379 aaPredicted RBP15.16■□□□□ 0.02
SDC1-204ENST00000429035 WASF3Q9UPY6 502 aa15.16■□□□□ 0.02
SDC1-204ENST00000429035 PCDHB9Q9Y5E1 797 aa15.16■□□□□ 0.02
SDC1-204ENST00000429035 TMEM131Q92545 1883 aa15.16■□□□□ 0.02
SDC1-204ENST00000429035 KCNJ18B7U540 433 aa15.15■□□□□ 0.02
SDC1-204ENST00000429035 M0QYV0 167 aa15.15■□□□□ 0.02
SDC1-204ENST00000429035 SMC2O95347 1197 aa15.15■□□□□ 0.02
SDC1-204ENST00000429035 SETSIPP0DME0 302 aa15.15■□□□□ 0.02
SDC1-204ENST00000429035 HOXD9P28356 352 aaPredicted RBP15.15■□□□□ 0.02
SDC1-204ENST00000429035 TPMTP51580 245 aa15.15■□□□□ 0.02
SDC1-204ENST00000429035 FAM193AP78312 1265 aa15.15■□□□□ 0.02
SDC1-204ENST00000429035 FKBP3Q00688 224 aaKnown RBP15.15■□□□□ 0.02
SDC1-204ENST00000429035 E2F5Q15329 346 aa15.15■□□□□ 0.02
SDC1-204ENST00000429035 CCDC40Q4G0X9 1142 aa15.15■□□□□ 0.02
SDC1-204ENST00000429035 BSPRYQ5W0U4 402 aa15.15■□□□□ 0.02
SDC1-204ENST00000429035 ANKRD40Q6AI12 368 aa15.15■□□□□ 0.02
SDC1-204ENST00000429035 ISM2Q6H9L7 571 aa15.15■□□□□ 0.02
SDC1-204ENST00000429035 CHST9Q7L1S5 443 aa15.15■□□□□ 0.02
SDC1-204ENST00000429035 BHLHA9Q7RTU4 235 aa15.15■□□□□ 0.02
SDC1-204ENST00000429035 PIWIL1Q96J94 861 aaKnown RBP15.15■□□□□ 0.02
SDC1-204ENST00000429035 WSB2Q9NYS7 404 aaPredicted RBP15.15■□□□□ 0.02
SDC1-204ENST00000429035 HBS1LQ9Y450 684 aaKnown RBP15.15■□□□□ 0.02
SDC1-204ENST00000429035 PCDHB4Q9Y5E5 795 aa15.15■□□□□ 0.02
SDC1-204ENST00000429035 NYNRINQ9P2P1 1898 aaKnown RBP15.14■□□□□ 0.01
SDC1-204ENST00000429035 A0A1B0GTW7 788 aa15.14■□□□□ 0.01
SDC1-204ENST00000429035 YJEFN3A6XGL0 299 aa15.14■□□□□ 0.01
SDC1-204ENST00000429035 E7ENQ6 273 aa15.14■□□□□ 0.01
SDC1-204ENST00000429035 SH3BP5O60239 455 aa15.14■□□□□ 0.01
SDC1-204ENST00000429035 VDRP11473 427 aa15.14■□□□□ 0.01
SDC1-204ENST00000429035 CD59P13987 128 aa15.14■□□□□ 0.01
SDC1-204ENST00000429035 TBXAS1P24557 533 aaPredicted RBP15.14■□□□□ 0.01
SDC1-204ENST00000429035 STIM1Q13586 685 aa15.14■□□□□ 0.01
SDC1-204ENST00000429035 TRIP4Q15650 581 aaPredicted RBP15.14■□□□□ 0.01
SDC1-204ENST00000429035 TMEM215Q68D42 235 aa15.14■□□□□ 0.01
SDC1-204ENST00000429035 PM20D1Q6GTS8 502 aa15.14■□□□□ 0.01
SDC1-204ENST00000429035 TMEM270Q6UE05 265 aa15.14■□□□□ 0.01
SDC1-204ENST00000429035 NAXDQ8IW45 347 aa15.14■□□□□ 0.01
SDC1-204ENST00000429035 FMR1NBQ8N0W7 255 aaPredicted RBP15.14■□□□□ 0.01
SDC1-204ENST00000429035 WFIKKN2Q8TEU8 576 aa15.14■□□□□ 0.01
SDC1-204ENST00000429035 GATA6Q92908 595 aa15.14■□□□□ 0.01
SDC1-204ENST00000429035 NT5C1BQ96P26 610 aa15.14■□□□□ 0.01
SDC1-204ENST00000429035 TMEM121BQ9BXQ6 578 aaPredicted RBP15.14■□□□□ 0.01
SDC1-204ENST00000429035 SLC2A11Q9BYW1 496 aa15.14■□□□□ 0.01
SDC1-204ENST00000429035 LHX5Q9H2C1 402 aa15.14■□□□□ 0.01
SDC1-204ENST00000429035 ABCB8Q9NUT2 735 aa15.14■□□□□ 0.01
SDC1-204ENST00000429035 DNAAF2Q9NVR5 837 aaKnown RBP15.14■□□□□ 0.01
SDC1-204ENST00000429035 NEUROG3Q9Y4Z2 214 aa15.14■□□□□ 0.01
SDC1-204ENST00000429035 CFAP47Q6ZTR5 3102 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 ZFHX4Q86UP3 3567 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 TMEM8BA6NDV4 472 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 UPK3BL1B0FP48 263 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 UPK3BL2E5RIL1 263 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 O00370 1275 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 PSMA7O14818 248 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 BRD2P25440 801 aaKnown RBP15.13■□□□□ 0.01
SDC1-204ENST00000429035 OXTRP30559 389 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 SGSHP51688 502 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 ZNF132P52740 706 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 COPAP53621 1224 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 DAOAP59103 153 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 LRRC63Q05C16 580 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 KLHL10Q6JEL2 608 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 FAM217AQ8IXS0 508 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 PPM1KQ8N3J5 372 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 CHCHD4Q8N4Q1 142 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 OR2T3Q8NH03 318 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 GOLGA1Q92805 767 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 SLC35C1Q96A29 364 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 GSDMAQ96QA5 445 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 CNGB3Q9NQW8 809 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 ITM2CQ9NQX7 267 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 ABCC13Q9NSE7 274 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 STIM2Q9P246 746 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 EIF2B4Q9UI10 523 aaKnown RBP15.13■□□□□ 0.01
SDC1-204ENST00000429035 HOOK1Q9UJC3 728 aaKnown RBP15.13■□□□□ 0.01
SDC1-204ENST00000429035 GGA2Q9UJY4 613 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 COQ4Q9Y3A0 265 aa15.13■□□□□ 0.01
SDC1-204ENST00000429035 TBL1XO60907 577 aa15.12■□□□□ 0.01
SDC1-204ENST00000429035 CALCAP01258 141 aa15.12■□□□□ 0.01
SDC1-204ENST00000429035 PABPC1P11940 636 aaKnown RBP15.12■□□□□ 0.01
SDC1-204ENST00000429035 HLA-FP30511 346 aa15.12■□□□□ 0.01
SDC1-204ENST00000429035 FMO5P49326 533 aa15.12■□□□□ 0.01
SDC1-204ENST00000429035 ZNF445P59923 1031 aa15.12■□□□□ 0.01
SDC1-204ENST00000429035 ENPP2Q13822 863 aa15.12■□□□□ 0.01
SDC1-204ENST00000429035 RFWD3Q6PCD5 774 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms