RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 PKDCCQ504Y2 493 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 LCLAT1Q6UWP7 414 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 ARHGEF19Q8IW93 802 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 RGL4Q8IZJ4 473 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 RBBP8NLQ8NC74 664 aaPredicted RBP17.83■□□□□ 0.44
TRIM39-209ENST00000428728 KCTD13Q8WZ19 329 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 ZSWIM1Q9BR11 485 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 MKRN2Q9H000 416 aaKnown RBP17.83■□□□□ 0.44
TRIM39-209ENST00000428728 PRDM16Q9HAZ2 1276 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 CNGB3Q9NQW8 809 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 ABCC13Q9NSE7 274 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 ELOVL2Q9NXB9 296 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 KIAA1257Q9ULG3 409 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 SLC6A14Q9UN76 642 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.83■□□□□ 0.44
TRIM39-209ENST00000428728 TMEM131Q92545 1883 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 CACNA1EQ15878 2313 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 PCNX2A6NKB5 2137 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 RNF225M0QZC1 329 aaPredicted RBP17.82■□□□□ 0.44
TRIM39-209ENST00000428728 SYNCRIPO60506 623 aaKnown RBP17.82■□□□□ 0.44
TRIM39-209ENST00000428728 GABBR2O75899 941 aa17.82■□□□□ 0.44
TRIM39-209ENST00000428728 SERPINF2P08697 491 aa17.82■□□□□ 0.44
TRIM39-209ENST00000428728 CSRP1P21291 193 aaKnown RBP17.82■□□□□ 0.44
TRIM39-209ENST00000428728 BMP6P22004 513 aa17.82■□□□□ 0.44
TRIM39-209ENST00000428728 GFPT1Q06210 699 aaPredicted RBP17.82■□□□□ 0.44
TRIM39-209ENST00000428728 CETN1Q12798 172 aa17.82■□□□□ 0.44
TRIM39-209ENST00000428728 MPPE1Q53F39 396 aa17.82■□□□□ 0.44
TRIM39-209ENST00000428728 TMEM215Q68D42 235 aa17.82■□□□□ 0.44
TRIM39-209ENST00000428728 PMF1Q6P1K2 205 aa17.82■□□□□ 0.44
TRIM39-209ENST00000428728 RRAGAQ7L523 313 aa17.82■□□□□ 0.44
TRIM39-209ENST00000428728 RABEPKQ7Z6M1 372 aa17.82■□□□□ 0.44
TRIM39-209ENST00000428728 OR2I1PQ8NGU4 316 aa17.82■□□□□ 0.44
TRIM39-209ENST00000428728 CEP76Q8TAP6 659 aa17.82■□□□□ 0.44
TRIM39-209ENST00000428728 CLEC4CQ8WTT0 213 aa17.82■□□□□ 0.44
TRIM39-209ENST00000428728 SLC2A11Q9BYW1 496 aa17.82■□□□□ 0.44
TRIM39-209ENST00000428728 EPG5Q9HCE0 2579 aa17.82■□□□□ 0.44
TRIM39-209ENST00000428728 BICDL2A1A5D9 508 aa17.81■□□□□ 0.44
TRIM39-209ENST00000428728 MEI4A8MW99 385 aa17.81■□□□□ 0.44
TRIM39-209ENST00000428728 PPP1R3GB7ZBB8 358 aa17.81■□□□□ 0.44
TRIM39-209ENST00000428728 NPC1O15118 1278 aa17.81■□□□□ 0.44
TRIM39-209ENST00000428728 CEACAM1P13688 526 aa17.81■□□□□ 0.44
TRIM39-209ENST00000428728 HLA-EP13747 358 aa17.81■□□□□ 0.44
TRIM39-209ENST00000428728 CD6P30203 668 aa17.81■□□□□ 0.44
TRIM39-209ENST00000428728 ENPP2Q13822 863 aa17.81■□□□□ 0.44
TRIM39-209ENST00000428728 MSANTD2Q6P1R3 559 aa17.81■□□□□ 0.44
TRIM39-209ENST00000428728 SERPINA13PQ6UXR4 307 aa17.81■□□□□ 0.44
TRIM39-209ENST00000428728 SCML4Q8N228 414 aa17.81■□□□□ 0.44
TRIM39-209ENST00000428728 LMO3Q8TAP4 145 aa17.81■□□□□ 0.44
TRIM39-209ENST00000428728 SLC35F5Q8WV83 523 aa17.81■□□□□ 0.44
TRIM39-209ENST00000428728 TOE1Q96GM8 510 aaKnown RBP17.81■□□□□ 0.44
TRIM39-209ENST00000428728 CAPN10Q9HC96 672 aa17.81■□□□□ 0.44
TRIM39-209ENST00000428728 KMT2BQ9UMN6 2715 aaPredicted RBP17.81■□□□□ 0.44
TRIM39-209ENST00000428728 PMM2O15305 246 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 GADD45BO75293 160 aaPredicted RBP17.8■□□□□ 0.44
TRIM39-209ENST00000428728 LTFP02788 710 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 EPHX1P07099 455 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 SPINK2P20155 84 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 MAOBP27338 520 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 HLA-FP30511 346 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 SGSHP51688 502 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 PAK1Q13153 545 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 MORC3Q14149 939 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 STILQ15468 1287 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 CNGA2Q16280 664 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 FNDC3BQ53EP0 1204 aaKnown RBP17.8■□□□□ 0.44
TRIM39-209ENST00000428728 SYCP2LQ5T4T6 812 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 ADGRF1Q5T601 910 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 TMPRSS6Q8IU80 811 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 TRIM59Q8IWR1 403 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 ELOA2Q8IYF1 753 aaPredicted RBP17.8■□□□□ 0.44
TRIM39-209ENST00000428728 HDDC3Q8N4P3 179 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 MINDY1Q8N5J2 469 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 ZNF366Q8N895 744 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 CYB5D2Q8WUJ1 264 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 PRCCQ92733 491 aaPredicted RBP17.8■□□□□ 0.44
TRIM39-209ENST00000428728 GOLGA1Q92805 767 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 TMA16Q96EY4 203 aaKnown RBP17.8■□□□□ 0.44
TRIM39-209ENST00000428728 SIPA1Q96FS4 1042 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 GPR174Q9BXC1 333 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 MIS12Q9H081 205 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 ABCB8Q9NUT2 735 aa17.8■□□□□ 0.44
TRIM39-209ENST00000428728 USP36Q9P275 1121 aaKnown RBP17.8■□□□□ 0.44
TRIM39-209ENST00000428728 KCNJ18B7U540 433 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 P4HA2O15460 535 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 LATS1O95835 1130 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 NCAM1P13591 858 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 KRT5P13647 590 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 TPMTP51580 245 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 ZNF132P52740 706 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 COPAP53621 1224 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 ZNF445P59923 1031 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 KCNH2Q12809 1159 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 E2F5Q15329 346 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 PLEKHG6Q3KR16 790 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 RFWD3Q6PCD5 774 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 CHST9Q7L1S5 443 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 WFDC5Q8TCV5 224 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 IRGQQ8WZA9 623 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 FOXJ1Q92949 421 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 ZNF419Q96HQ0 510 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms