RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 ADCY1Q08828 1119 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 SLC10A2Q12908 348 aaPredicted RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 QRICH1Q2TAL8 776 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 DCAF6Q58WW2 860 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 IYDQ6PHW0 289 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 ILDR2Q71H61 639 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 HPS6Q86YV9 775 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 ARHGEF19Q8IW93 802 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 PGAM4Q8N0Y7 254 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 SIGLEC10Q96LC7 697 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 DACH2Q96NX9 599 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 HAUS8Q9BT25 410 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 TMEM121Q9BTD3 319 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 SUCOQ9UBS9 1254 aaKnown RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 SLC8A2Q9UPR5 921 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 PCDHB12Q9Y5F1 795 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 WDR91A4D1P6 747 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 GOLGA8TH3BQL2 631 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 APOC4-APOC2K7ER74 178 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 APOC2P02655 101 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 ALDOAP04075 364 aaKnown RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 INHBAP08476 426 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 ACO1P21399 889 aaKnown RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 ZNF132P52740 706 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 LSM12Q3MHD2 195 aaKnown RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 BRDTQ58F21 947 aaPredicted RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 MBLAC2Q68D91 279 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 LMOD2Q6P5Q4 547 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 MCUQ8NE86 351 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 TAS1R2Q8TE23 839 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 SLC45A3Q96JT2 553 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 CDH19Q9H159 772 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 ZNF395Q9H8N7 513 aaPredicted RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 PNPLA3Q9NST1 481 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 ATAD3AQ9NVI7 634 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 SCINQ9Y6U3 715 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 TCAF2A6NFQ2 919 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 GOLGA8RI6L899 631 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 PIAS1O75925 651 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 BGNP21810 368 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 RPL22P35268 128 aaKnown RBP5.29□□□□□ -1.56
RIF1-203ENST00000428287 KCNJ11Q14654 390 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 CEP55Q53EZ4 464 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 DZIP1Q86YF9 867 aaKnown RBP5.29□□□□□ -1.56
RIF1-203ENST00000428287 NUDCD3Q8IVD9 361 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 IGDCC3Q8IVU1 814 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 PNPT1Q8TCS8 783 aaKnown RBP5.29□□□□□ -1.56
RIF1-203ENST00000428287 GMCL1Q96IK5 515 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 LENG8Q96PV6 779 aaPredicted RBP5.29□□□□□ -1.56
RIF1-203ENST00000428287 CSRNP1Q96S65 589 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 MECRQ9BV79 373 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 YTHDF1Q9BYJ9 559 aaKnown RBP5.29□□□□□ -1.56
RIF1-203ENST00000428287 WDR11Q9BZH6 1224 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 C10orf88Q9H8K7 445 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 RAB20Q9NX57 234 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 CORINQ9Y5Q5 1042 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 IVNS1ABPQ9Y6Y0 642 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 PLXNA2O75051 1894 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 I3L4J1 428 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 K7EPI3 171 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 RNF103O00237 685 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 CHADO15335 359 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 PAPSS1O43252 624 aaPredicted RBP5.29□□□□□ -1.56
RIF1-203ENST00000428287 ENTPD3O75355 529 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 LRCH4O75427 683 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 ALDH1A2O94788 518 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 PLS3P13797 630 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 THOP1P52888 689 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 TMPRSS15P98073 1019 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 SLC25A3Q00325 362 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 GAD2Q05329 585 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 RALGPS1Q5JS13 557 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 CAND1Q86VP6 1230 aaKnown RBP5.29□□□□□ -1.56
RIF1-203ENST00000428287 DSELQ8IZU8 1212 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 CNTD1Q8N815 330 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 TTC17Q96AE7 1141 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 CCDC124Q96CT7 223 aaKnown RBP5.29□□□□□ -1.56
RIF1-203ENST00000428287 C12orf65Q9H3J6 166 aaKnown RBP5.29□□□□□ -1.56
RIF1-203ENST00000428287 CLK4Q9HAZ1 481 aaKnown RBP5.29□□□□□ -1.56
RIF1-203ENST00000428287 AP4S1Q9Y587 144 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 FRMPD3Q5JV73 1810 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 AKAP10O43572 662 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 ZBTB14O43829 449 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 CPNE6O95741 557 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 FGF3P11487 239 aaPredicted RBP5.29□□□□□ -1.56
RIF1-203ENST00000428287 SLC7A1P30825 629 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 CDKL1Q00532 357 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 MS4A2Q01362 244 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 CACNB1Q02641 598 aaPredicted RBP5.29□□□□□ -1.56
RIF1-203ENST00000428287 TAP1Q03518 808 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 PTK7Q13308 1070 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 GRIK5Q16478 980 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 TRIM71Q2Q1W2 868 aaKnown RBP5.29□□□□□ -1.56
RIF1-203ENST00000428287 LGSNQ5TDP6 509 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 NIPAL1Q6NVV3 410 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 TFAP2DQ7Z6R9 452 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 PHTF2Q8N3S3 785 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 FIBCD1Q8N539 461 aa5.29□□□□□ -1.56
RIF1-203ENST00000428287 TRIB2Q92519 343 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms