RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 PIK3R2O00459 728 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 SKAP2O75563 359 aaPredicted RBP8.11□□□□□ -1.11
LRCH3-204ENST00000428136 ALDOAP04075 364 aaKnown RBP8.11□□□□□ -1.11
LRCH3-204ENST00000428136 LGALS2P05162 132 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 MYL4P12829 197 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 TFE3P19532 575 aaPredicted RBP8.11□□□□□ -1.11
LRCH3-204ENST00000428136 SARNPP82979 210 aaKnown RBP8.11□□□□□ -1.11
LRCH3-204ENST00000428136 LAMC2Q13753 1193 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 AAGABQ6PD74 315 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 ALKAL1Q6UXT8 129 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 ULK2Q8IYT8 1036 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 CRYBG2Q8N1P7 616 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 STMN2Q93045 179 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 SPATA13Q96N96 652 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 NR1H4Q96RI1 486 aaPredicted RBP8.11□□□□□ -1.11
LRCH3-204ENST00000428136 MMP19Q99542 508 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 NAT9Q9BTE0 207 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 MROH8Q9H579 483 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 PCMTD2Q9NV79 361 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 PPARGC1AQ9UBK2 798 aaKnown RBP8.11□□□□□ -1.11
LRCH3-204ENST00000428136 ANGPTL2Q9UKU9 493 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 KCNH4Q9UQ05 1017 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.11□□□□□ -1.11
LRCH3-204ENST00000428136 CITO14578 2027 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 H3BRJ5 948 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 ZNF195O14628 629 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 PLIN3O60664 434 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 GLRA3O75311 464 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 ENO1P06733 434 aaKnown RBP8.11□□□□□ -1.11
LRCH3-204ENST00000428136 FESP07332 822 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 CHRM1P11229 460 aaPredicted RBP8.11□□□□□ -1.11
LRCH3-204ENST00000428136 VAV1P15498 845 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 SP100P23497 879 aaPredicted RBP8.11□□□□□ -1.11
LRCH3-204ENST00000428136 GRIA1P42261 906 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 GLUD2P49448 558 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 TUBP50607 506 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 CCNHP51946 323 aaPredicted RBP8.11□□□□□ -1.11
LRCH3-204ENST00000428136 Q3C1V9 767 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 DCAF4L1Q3SXM0 396 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 FASTKD1Q53R41 847 aaKnown RBP8.11□□□□□ -1.11
LRCH3-204ENST00000428136 MROH9Q5TGP6 573 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 MTHFD1LQ6UB35 978 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 PACS1Q6VY07 963 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 PDCD7Q8N8D1 485 aaKnown RBP8.11□□□□□ -1.11
LRCH3-204ENST00000428136 ANKRD52Q8NB46 1076 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 PIWIL2Q8TC59 973 aaKnown RBP8.11□□□□□ -1.11
LRCH3-204ENST00000428136 DEPDC1BQ8WUY9 529 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 HTR3CQ8WXA8 447 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 ZNF184Q99676 751 aaPredicted RBP8.11□□□□□ -1.11
LRCH3-204ENST00000428136 FAM96AQ9H5X1 160 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 PDGFCQ9NRA1 345 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 DNAJC28Q9NX36 388 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 SLC7A8Q9UHI5 535 aa8.11□□□□□ -1.11
LRCH3-204ENST00000428136 A0A088AWK7 358 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 A6NJR5 290 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 CCNT2O60583 730 aaKnown RBP8.1□□□□□ -1.11
LRCH3-204ENST00000428136 ZNF189O75820 626 aaPredicted RBP8.1□□□□□ -1.11
LRCH3-204ENST00000428136 KLHL2O95198 593 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 ANPEPP15144 967 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 PGAM1P18669 254 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 CRABP2P29373 138 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 HARS2P49590 506 aaKnown RBP8.1□□□□□ -1.11
LRCH3-204ENST00000428136 HNRNPDQ14103 355 aaKnown RBP8.1□□□□□ -1.11
LRCH3-204ENST00000428136 PDE1CQ14123 709 aaPredicted RBP8.1□□□□□ -1.11
LRCH3-204ENST00000428136 TAPT1Q6NXT6 567 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 TMEM154Q6P9G4 183 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 PGM2L1Q6PCE3 622 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 GADL1Q6ZQY3 521 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 RIPOR1Q6ZS17 1223 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 ACOT1Q86TX2 421 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 ZNF410Q86VK4 478 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 KBTBD2Q8IY47 623 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 GPC2Q8N158 579 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 SHCBP1Q8NEM2 672 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 PPTC7Q8NI37 304 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 TFB1MQ8WVM0 346 aaKnown RBP8.1□□□□□ -1.11
LRCH3-204ENST00000428136 NT5C3BQ969T7 300 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 KIF12Q96FN5 646 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 SNX27Q96L92 541 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 TRIM56Q9BRZ2 755 aaKnown RBP8.1□□□□□ -1.11
LRCH3-204ENST00000428136 FZD10Q9ULW2 581 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 AP4E1Q9UPM8 1137 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 POLR2AP24928 1970 aaKnown RBP8.1□□□□□ -1.11
LRCH3-204ENST00000428136 ASB14A6NK59 587 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 PRR5-ARHGAP8B1AHC4 643 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 MAP3K7O43318 606 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 FKBP6O75344 327 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 PROCP04070 461 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 PIM1P11309 404 aaPredicted RBP8.1□□□□□ -1.11
LRCH3-204ENST00000428136 GRK2P25098 689 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 ACADSBP45954 432 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 ARHGAP8P85298 464 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 BST2Q10589 180 aaKnown RBP8.1□□□□□ -1.11
LRCH3-204ENST00000428136 KCTD2Q14681 263 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 PCLAFQ15004 111 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 SOWAHAQ2M3V2 549 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 HEATR6Q6AI08 1181 aaKnown RBP8.1□□□□□ -1.11
LRCH3-204ENST00000428136 PPFIBP2Q8ND30 876 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 HSFY1Q96LI6 401 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 SORT1Q99523 831 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms