RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 CYTH4Q9UIA0 394 aa19.18■□□□□ 0.66
PSPC1-202ENST00000427943 GFRA2O00451 464 aa19.17■□□□□ 0.66
PSPC1-202ENST00000427943 MED7O43513 233 aa19.17■□□□□ 0.66
PSPC1-202ENST00000427943 IGLV3-27P01718 113 aa19.17■□□□□ 0.66
PSPC1-202ENST00000427943 NCAM1P13591 858 aa19.17■□□□□ 0.66
PSPC1-202ENST00000427943 IL12RB1P42701 662 aa19.17■□□□□ 0.66
PSPC1-202ENST00000427943 LIMK1P53667 647 aa19.17■□□□□ 0.66
PSPC1-202ENST00000427943 TBX4P57082 545 aa19.17■□□□□ 0.66
PSPC1-202ENST00000427943 BYSLQ13895 437 aaKnown RBP19.17■□□□□ 0.66
PSPC1-202ENST00000427943 EXOC3L4Q17RC7 722 aa19.17■□□□□ 0.66
PSPC1-202ENST00000427943 HSP90AA4PQ58FG1 418 aa19.17■□□□□ 0.66
PSPC1-202ENST00000427943 PPM1JQ5JR12 505 aa19.17■□□□□ 0.66
PSPC1-202ENST00000427943 RNF43Q68DV7 783 aa19.17■□□□□ 0.66
PSPC1-202ENST00000427943 KIAA1324Q6UXG2 1013 aaKnown RBP19.17■□□□□ 0.66
PSPC1-202ENST00000427943 ENOSF1Q7L5Y1 443 aa19.17■□□□□ 0.66
PSPC1-202ENST00000427943 DEFB119Q8N690 84 aa19.17■□□□□ 0.66
PSPC1-202ENST00000427943 UCMAQ8WVF2 138 aa19.17■□□□□ 0.66
PSPC1-202ENST00000427943 ZNF606Q8WXB4 792 aa19.17■□□□□ 0.66
PSPC1-202ENST00000427943 NUP62CLQ9H1M0 184 aa19.17■□□□□ 0.66
PSPC1-202ENST00000427943 THAP10Q9P2Z0 257 aaPredicted RBP19.17■□□□□ 0.66
PSPC1-202ENST00000427943 APEX2Q9UBZ4 518 aa19.17■□□□□ 0.66
PSPC1-202ENST00000427943 STOML2Q9UJZ1 356 aa19.17■□□□□ 0.66
PSPC1-202ENST00000427943 AJAP1Q9UKB5 411 aaPredicted RBP19.17■□□□□ 0.66
PSPC1-202ENST00000427943 CYP8B1Q9UNU6 501 aa19.17■□□□□ 0.66
PSPC1-202ENST00000427943 IGHV1OR15-9A0A0B4J2B8 117 aa19.16■□□□□ 0.66
PSPC1-202ENST00000427943 GOLGA6L7A0A1B0GV03 622 aa19.16■□□□□ 0.66
PSPC1-202ENST00000427943 LNP1A1A4G5 178 aa19.16■□□□□ 0.66
PSPC1-202ENST00000427943 E5RJQ4 531 aa19.16■□□□□ 0.66
PSPC1-202ENST00000427943 ZBTB24O43167 697 aaPredicted RBP19.16■□□□□ 0.66
PSPC1-202ENST00000427943 LATS1O95835 1130 aa19.16■□□□□ 0.66
PSPC1-202ENST00000427943 FYNP06241 537 aa19.16■□□□□ 0.66
PSPC1-202ENST00000427943 RPL34P49207 117 aaKnown RBP19.16■□□□□ 0.66
PSPC1-202ENST00000427943 RPL6Q02878 288 aaKnown RBP19.16■□□□□ 0.66
PSPC1-202ENST00000427943 ZNF234Q14588 700 aa19.16■□□□□ 0.66
PSPC1-202ENST00000427943 FUT11Q495W5 492 aa19.16■□□□□ 0.66
PSPC1-202ENST00000427943 ADGRF1Q5T601 910 aa19.16■□□□□ 0.66
PSPC1-202ENST00000427943 TMEM215Q68D42 235 aa19.16■□□□□ 0.66
PSPC1-202ENST00000427943 RFWD3Q6PCD5 774 aa19.16■□□□□ 0.66
PSPC1-202ENST00000427943 ADAM32Q8TC27 787 aa19.16■□□□□ 0.66
PSPC1-202ENST00000427943 DQX1Q8TE96 717 aaKnown RBP19.16■□□□□ 0.66
PSPC1-202ENST00000427943 MRGPRX1Q96LB2 322 aa19.16■□□□□ 0.66
PSPC1-202ENST00000427943 SLC2A11Q9BYW1 496 aa19.16■□□□□ 0.66
PSPC1-202ENST00000427943 ELOVL2Q9NXB9 296 aa19.16■□□□□ 0.66
PSPC1-202ENST00000427943 TJP2Q9UDY2 1190 aa19.16■□□□□ 0.66
PSPC1-202ENST00000427943 NAALADL1Q9UQQ1 740 aa19.16■□□□□ 0.66
PSPC1-202ENST00000427943 GTPBP10A4D1E9 387 aaKnown RBP19.15■□□□□ 0.66
PSPC1-202ENST00000427943 PON1P27169 355 aa19.15■□□□□ 0.66
PSPC1-202ENST00000427943 HLA-FP30511 346 aa19.15■□□□□ 0.66
PSPC1-202ENST00000427943 SLC6A4P31645 630 aa19.15■□□□□ 0.66
PSPC1-202ENST00000427943 ACADSBP45954 432 aa19.15■□□□□ 0.66
PSPC1-202ENST00000427943 STARD3Q14849 445 aa19.15■□□□□ 0.66
PSPC1-202ENST00000427943 EIF4HQ15056 248 aaKnown RBP19.15■□□□□ 0.66
PSPC1-202ENST00000427943 MAN2A1Q16706 1144 aa19.15■□□□□ 0.66
PSPC1-202ENST00000427943 LYSMD4Q5XG99 296 aa19.15■□□□□ 0.66
PSPC1-202ENST00000427943 NUGGCQ68CJ6 796 aa19.15■□□□□ 0.66
PSPC1-202ENST00000427943 WFDC5Q8TCV5 224 aa19.15■□□□□ 0.66
PSPC1-202ENST00000427943 SHC3Q92529 594 aa19.15■□□□□ 0.66
PSPC1-202ENST00000427943 TMA16Q96EY4 203 aaKnown RBP19.15■□□□□ 0.66
PSPC1-202ENST00000427943 FAM81BQ96LP2 452 aa19.15■□□□□ 0.66
PSPC1-202ENST00000427943 SLC4A5Q9BY07 1137 aa19.15■□□□□ 0.66
PSPC1-202ENST00000427943 THAP9Q9H5L6 903 aa19.15■□□□□ 0.66
PSPC1-202ENST00000427943 SIX2Q9NPC8 291 aa19.15■□□□□ 0.66
PSPC1-202ENST00000427943 TMEM74BQ9NUR3 256 aa19.15■□□□□ 0.66
PSPC1-202ENST00000427943 CNOT1A5YKK6 2376 aaKnown RBP19.14■□□□□ 0.66
PSPC1-202ENST00000427943 KHNYNO15037 678 aaKnown RBP19.14■□□□□ 0.65
PSPC1-202ENST00000427943 PAPSS1O43252 624 aaPredicted RBP19.14■□□□□ 0.65
PSPC1-202ENST00000427943 SART1O43290 800 aaKnown RBP19.14■□□□□ 0.65
PSPC1-202ENST00000427943 AP5Z1O43299 807 aa19.14■□□□□ 0.65
PSPC1-202ENST00000427943 ACSL4O60488 711 aa19.14■□□□□ 0.65
PSPC1-202ENST00000427943 TBL1XO60907 577 aa19.14■□□□□ 0.65
PSPC1-202ENST00000427943 PNMA6AP0CW24 399 aaPredicted RBP19.14■□□□□ 0.65
PSPC1-202ENST00000427943 ITPKAP23677 461 aa19.14■□□□□ 0.65
PSPC1-202ENST00000427943 PRKCHP24723 683 aa19.14■□□□□ 0.65
PSPC1-202ENST00000427943 SLC11A2P49281 568 aa19.14■□□□□ 0.65
PSPC1-202ENST00000427943 ZNF445P59923 1031 aa19.14■□□□□ 0.65
PSPC1-202ENST00000427943 RING1Q06587 406 aa19.14■□□□□ 0.65
PSPC1-202ENST00000427943 ENPP2Q13822 863 aa19.14■□□□□ 0.65
PSPC1-202ENST00000427943 MEA1Q16626 185 aa19.14■□□□□ 0.65
PSPC1-202ENST00000427943 FAM133BQ5BKY9 247 aaKnown RBP19.14■□□□□ 0.65
PSPC1-202ENST00000427943 NADSYN1Q6IA69 706 aa19.14■□□□□ 0.65
PSPC1-202ENST00000427943 SLC36A4Q6YBV0 504 aa19.14■□□□□ 0.65
PSPC1-202ENST00000427943 TAC4Q86UU9 113 aa19.14■□□□□ 0.65
PSPC1-202ENST00000427943 CACUL1Q86Y37 369 aa19.14■□□□□ 0.65
PSPC1-202ENST00000427943 PASD1Q8IV76 773 aa19.14■□□□□ 0.65
PSPC1-202ENST00000427943 FAM114A1Q8IWE2 563 aa19.14■□□□□ 0.65
PSPC1-202ENST00000427943 UNC45BQ8IWX7 931 aa19.14■□□□□ 0.65
PSPC1-202ENST00000427943 FCRL2Q96LA5 508 aaPredicted RBP19.14■□□□□ 0.65
PSPC1-202ENST00000427943 PRICKLE1Q96MT3 831 aaPredicted RBP19.14■□□□□ 0.65
PSPC1-202ENST00000427943 SERPINB11Q96P15 392 aa19.14■□□□□ 0.65
PSPC1-202ENST00000427943 ABCB8Q9NUT2 735 aa19.14■□□□□ 0.65
PSPC1-202ENST00000427943 CAPN9O14815 690 aa19.13■□□□□ 0.65
PSPC1-202ENST00000427943 ZNF217O75362 1048 aa19.13■□□□□ 0.65
PSPC1-202ENST00000427943 MOCS2O96007 188 aaPredicted RBP19.13■□□□□ 0.65
PSPC1-202ENST00000427943 PRKCSHP14314 528 aaPredicted RBP19.13■□□□□ 0.65
PSPC1-202ENST00000427943 IRX4P78413 519 aa19.13■□□□□ 0.65
PSPC1-202ENST00000427943 ARID5AQ03989 594 aa19.13■□□□□ 0.65
PSPC1-202ENST00000427943 PDCLQ13371 301 aa19.13■□□□□ 0.65
PSPC1-202ENST00000427943 TRIM61Q5EBN2 209 aa19.13■□□□□ 0.65
PSPC1-202ENST00000427943 PIK3R6Q5UE93 754 aa19.13■□□□□ 0.65
PSPC1-202ENST00000427943 SYPL2Q5VXT5 272 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms