RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 ZNF510Q9Y2H8 683 aa13.28□□□□□ -0.28
GPC1-204ENST00000426280 OTOGLQ3ZCN5 2332 aa13.28□□□□□ -0.28
GPC1-204ENST00000426280 MED7O43513 233 aa13.27□□□□□ -0.29
GPC1-204ENST00000426280 GDF9O60383 454 aa13.27□□□□□ -0.29
GPC1-204ENST00000426280 FBXO21O94952 628 aa13.27□□□□□ -0.29
GPC1-204ENST00000426280 RETP07949 1114 aa13.27□□□□□ -0.29
GPC1-204ENST00000426280 UCHL3P15374 230 aa13.27□□□□□ -0.29
GPC1-204ENST00000426280 CHKAP35790 457 aa13.27□□□□□ -0.29
GPC1-204ENST00000426280 TBX4P57082 545 aa13.27□□□□□ -0.29
GPC1-204ENST00000426280 RAPGEF1Q13905 1077 aa13.27□□□□□ -0.29
GPC1-204ENST00000426280 MAP7D1Q3KQU3 841 aa13.27□□□□□ -0.29
GPC1-204ENST00000426280 TAF3Q5VWG9 929 aa13.27□□□□□ -0.29
GPC1-204ENST00000426280 FAM183BPQ6ZVS7 135 aa13.27□□□□□ -0.29
GPC1-204ENST00000426280 NOP9Q86U38 636 aaKnown RBP13.27□□□□□ -0.29
GPC1-204ENST00000426280 DEFB106AQ8N104 65 aa13.27□□□□□ -0.29
GPC1-204ENST00000426280 DDI1Q8WTU0 396 aa13.27□□□□□ -0.29
GPC1-204ENST00000426280 FAM149B1Q96BN6 582 aa13.27□□□□□ -0.29
GPC1-204ENST00000426280 PRICKLE1Q96MT3 831 aaPredicted RBP13.27□□□□□ -0.29
GPC1-204ENST00000426280 TSPY26PQ9H489 355 aa13.27□□□□□ -0.29
GPC1-204ENST00000426280 SLC27A6Q9Y2P4 619 aa13.27□□□□□ -0.29
GPC1-204ENST00000426280 TCRBV21S2A2A0A5A6 115 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 ACSL4O60488 711 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 IGLV3-25P01717 112 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 CYP11B1P15538 503 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 TFE3P19532 575 aaPredicted RBP13.26□□□□□ -0.29
GPC1-204ENST00000426280 HLA-FP30511 346 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 NTSR1P30989 418 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 ZNF445P59923 1031 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 PTK2Q05397 1052 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 SF3A2Q15428 464 aaKnown RBP13.26□□□□□ -0.29
GPC1-204ENST00000426280 PTPN20Q4JDL3 420 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 MPPE1Q53F39 396 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 ZC3H12AQ5D1E8 599 aaKnown RBP13.26□□□□□ -0.29
GPC1-204ENST00000426280 EOGTQ5NDL2 527 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 ADGRF1Q5T601 910 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 PIK3R6Q5UE93 754 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 CACNA2D4Q7Z3S7 1137 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.26□□□□□ -0.29
GPC1-204ENST00000426280 SLC20A1Q8WUM9 679 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 HMGB4Q8WW32 186 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 TMA16Q96EY4 203 aaKnown RBP13.26□□□□□ -0.29
GPC1-204ENST00000426280 ZC3H10Q96K80 434 aaKnown RBP13.26□□□□□ -0.29
GPC1-204ENST00000426280 PPP1R13BQ96KQ4 1090 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 LMLNQ96KR4 655 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 GABRG3Q99928 467 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 NUCKS1Q9H1E3 243 aaKnown RBP13.26□□□□□ -0.29
GPC1-204ENST00000426280 LHX5Q9H2C1 402 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 ANLNQ9NQW6 1124 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 SEMA4GQ9NTN9 838 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 SIK3Q9Y2K2 1263 aa13.26□□□□□ -0.29
GPC1-204ENST00000426280 RIF1Q5UIP0 2472 aaKnown RBP13.25□□□□□ -0.29
GPC1-204ENST00000426280 PTPRZ1P23471 2315 aaPredicted RBP13.25□□□□□ -0.29
GPC1-204ENST00000426280 WDR87Q6ZQQ6 2873 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 I6L893 689 aaPredicted RBP13.25□□□□□ -0.29
GPC1-204ENST00000426280 TRUB2O95900 331 aaKnown RBP13.25□□□□□ -0.29
GPC1-204ENST00000426280 MMEP08473 750 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 HOXB2P14652 356 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 CHRNB2P17787 502 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 CD70P32970 193 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 IL12RB1P42701 662 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 ACADSBP45954 432 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 HARS2P49590 506 aaKnown RBP13.25□□□□□ -0.29
GPC1-204ENST00000426280 NUMBP49757 651 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 RPS24P62847 133 aaKnown RBP13.25□□□□□ -0.29
GPC1-204ENST00000426280 YWHAZP63104 245 aaKnown RBP13.25□□□□□ -0.29
GPC1-204ENST00000426280 MEA1Q16626 185 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 RSPO4Q2I0M5 234 aaPredicted RBP13.25□□□□□ -0.29
GPC1-204ENST00000426280 FSCBQ5H9T9 825 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 OTUD1Q5VV17 481 aaPredicted RBP13.25□□□□□ -0.29
GPC1-204ENST00000426280 RNF43Q68DV7 783 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 OR6B2Q6IFH4 312 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 TCEAL6Q6IPX3 200 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 TRNP1Q6NT89 227 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 OLFML1Q6UWY5 402 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 MMS22LQ6ZRQ5 1243 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 KIAA0907Q7Z7F0 614 aaPredicted RBP13.25□□□□□ -0.29
GPC1-204ENST00000426280 CHPFQ8IZ52 775 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 CFAP52Q8N1V2 620 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 DEFB119Q8N690 84 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 RNF214Q8ND24 703 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 IPO4Q8TEX9 1081 aaKnown RBP13.25□□□□□ -0.29
GPC1-204ENST00000426280 CYB5D2Q8WUJ1 264 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 TCEAL3Q969E4 200 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 SLC2A13Q96QE2 648 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 MTG2Q9H4K7 406 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 STIM2Q9P246 746 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 THAP10Q9P2Z0 257 aaPredicted RBP13.25□□□□□ -0.29
GPC1-204ENST00000426280 GMEB2Q9UKD1 530 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 RAB23Q9ULC3 237 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 USP18Q9UMW8 372 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 STON1Q9Y6Q2 735 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 EP300Q09472 2414 aaPredicted RBP13.25□□□□□ -0.29
GPC1-204ENST00000426280 FAM186AA6NE01 2351 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 ZNF292O60281 2723 aa13.25□□□□□ -0.29
GPC1-204ENST00000426280 TEX33O43247 280 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 TBL1XO60907 577 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 GFPT2O94808 682 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 EPN2O95208 641 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 MOCS2O96007 188 aaPredicted RBP13.24□□□□□ -0.29
GPC1-204ENST00000426280 HLA-EP13747 358 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms