RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 CENPIQ92674 756 aaPredicted RBP25.43■■□□□ 1.66
VEGFA-209ENST00000425836 BAG1Q99933 345 aaPredicted RBP25.43■■□□□ 1.66
VEGFA-209ENST00000425836 TRIM7Q9C029 511 aa25.43■■□□□ 1.66
VEGFA-209ENST00000425836 RAB6CQ9H0N0 254 aa25.43■■□□□ 1.66
VEGFA-209ENST00000425836 C8orf33Q9H7E9 229 aaPredicted RBP25.43■■□□□ 1.66
VEGFA-209ENST00000425836 XPO7Q9UIA9 1087 aaKnown RBP25.43■■□□□ 1.66
VEGFA-209ENST00000425836 NCOR1O75376 2440 aa25.42■■□□□ 1.66
VEGFA-209ENST00000425836 KIF26AQ9ULI4 1882 aaPredicted RBP25.42■■□□□ 1.66
VEGFA-209ENST00000425836 SHISA7A6NL88 538 aa25.42■■□□□ 1.66
VEGFA-209ENST00000425836 MOCS2O96007 188 aaPredicted RBP25.42■■□□□ 1.66
VEGFA-209ENST00000425836 GJA4P35212 333 aa25.42■■□□□ 1.66
VEGFA-209ENST00000425836 VCPP55072 806 aaKnown RBP25.42■■□□□ 1.66
VEGFA-209ENST00000425836 GSDMDP57764 484 aa25.42■■□□□ 1.66
VEGFA-209ENST00000425836 PRKCQQ04759 706 aa25.42■■□□□ 1.66
VEGFA-209ENST00000425836 CDO1Q16878 200 aa25.42■■□□□ 1.66
VEGFA-209ENST00000425836 TPGS1Q6ZTW0 290 aa25.42■■□□□ 1.66
VEGFA-209ENST00000425836 TPRG1Q6ZUI0 275 aa25.42■■□□□ 1.66
VEGFA-209ENST00000425836 SND1Q7KZF4 910 aaKnown RBP eCLIP25.42■■□□□ 1.664e-9■■□□□ 11.7
VEGFA-209ENST00000425836 TMEM139Q8IV31 216 aa25.42■■□□□ 1.66
VEGFA-209ENST00000425836 CPXM2Q8N436 756 aa25.42■■□□□ 1.66
VEGFA-209ENST00000425836 CHFRQ96EP1 664 aa25.42■■□□□ 1.66
VEGFA-209ENST00000425836 WDCPQ9H6R7 721 aa25.42■■□□□ 1.66
VEGFA-209ENST00000425836 TMEM51Q9NW97 253 aa25.42■■□□□ 1.66
VEGFA-209ENST00000425836 GOLGA6L7A0A1B0GV03 622 aa25.41■■□□□ 1.66
VEGFA-209ENST00000425836 SPECC1L-ADORA2AF8WAN1 911 aa25.41■■□□□ 1.66
VEGFA-209ENST00000425836 LCA5LO95447 670 aa25.41■■□□□ 1.66
VEGFA-209ENST00000425836 ADH1CP00326 375 aa25.41■■□□□ 1.66
VEGFA-209ENST00000425836 CTHP32929 405 aa25.41■■□□□ 1.66
VEGFA-209ENST00000425836 CYLC1P35663 651 aaPredicted RBP25.41■■□□□ 1.66
VEGFA-209ENST00000425836 GAB4Q2WGN9 574 aa25.41■■□□□ 1.66
VEGFA-209ENST00000425836 NADSYN1Q6IA69 706 aa25.41■■□□□ 1.66
VEGFA-209ENST00000425836 STRADAQ7RTN6 431 aa25.41■■□□□ 1.66
VEGFA-209ENST00000425836 ATP6V0D2Q8N8Y2 350 aa25.41■■□□□ 1.66
VEGFA-209ENST00000425836 FAM172AQ8WUF8 416 aa25.41■■□□□ 1.66
VEGFA-209ENST00000425836 BTN2A3PQ96KV6 586 aa25.41■■□□□ 1.66
VEGFA-209ENST00000425836 CNPY3Q9BT09 278 aa25.41■■□□□ 1.66
VEGFA-209ENST00000425836 SLC12A6Q9UHW9 1150 aa25.41■■□□□ 1.66
VEGFA-209ENST00000425836 BDP1A6H8Y1 2624 aa25.41■■□□□ 1.66
VEGFA-209ENST00000425836 TMEM221A6NGB7 291 aa25.4■■□□□ 1.66
VEGFA-209ENST00000425836 M0R296 226 aa25.4■■□□□ 1.66
VEGFA-209ENST00000425836 GFRA2O00451 464 aa25.4■■□□□ 1.66
VEGFA-209ENST00000425836 CCP110O43303 1012 aa25.4■■□□□ 1.66
VEGFA-209ENST00000425836 TMEM253P0C7T8 217 aa25.4■■□□□ 1.66
VEGFA-209ENST00000425836 ADH5P11766 374 aa25.4■■□□□ 1.66
VEGFA-209ENST00000425836 STARD6P59095 220 aa25.4■■□□□ 1.66
VEGFA-209ENST00000425836 FAM133BQ5BKY9 247 aaKnown RBP25.4■■□□□ 1.66
VEGFA-209ENST00000425836 BRMS1LQ5PSV4 323 aa25.4■■□□□ 1.66
VEGFA-209ENST00000425836 RALGPS2Q86X27 583 aaPredicted RBP25.4■■□□□ 1.66
VEGFA-209ENST00000425836 CTNNBL1Q8WYA6 563 aaPredicted RBP25.4■■□□□ 1.66
VEGFA-209ENST00000425836 P2RY11Q96G91 374 aa25.4■■□□□ 1.66
VEGFA-209ENST00000425836 NUP85Q9BW27 656 aa25.4■■□□□ 1.66
VEGFA-209ENST00000425836 ANLNQ9NQW6 1124 aa25.4■■□□□ 1.66
VEGFA-209ENST00000425836 ARHGEF38Q9NXL2 777 aa25.4■■□□□ 1.66
VEGFA-209ENST00000425836 EPN1Q9Y6I3 576 aaPredicted RBP25.4■■□□□ 1.66
VEGFA-209ENST00000425836 DLL1O00548 723 aa25.39■■□□□ 1.66
VEGFA-209ENST00000425836 TRDMT1O14717 391 aaKnown RBP25.39■■□□□ 1.66
VEGFA-209ENST00000425836 SLC6A4P31645 630 aa25.39■■□□□ 1.66
VEGFA-209ENST00000425836 HDAC4P56524 1084 aa25.39■■□□□ 1.66
VEGFA-209ENST00000425836 GAD2Q05329 585 aa25.39■■□□□ 1.66
VEGFA-209ENST00000425836 ANO4Q32M45 955 aa25.39■■□□□ 1.66
VEGFA-209ENST00000425836 C10orf76Q5T2E6 689 aa25.39■■□□□ 1.66
VEGFA-209ENST00000425836 TXNDC11Q6PKC3 985 aa25.39■■□□□ 1.66
VEGFA-209ENST00000425836 RAD9BQ6WBX8 426 aa25.39■■□□□ 1.66
VEGFA-209ENST00000425836 FAM131BQ86XD5 332 aa25.39■■□□□ 1.66
VEGFA-209ENST00000425836 FNIP1Q8TF40 1166 aa25.39■■□□□ 1.66
VEGFA-209ENST00000425836 MSANTD3Q96H12 275 aa25.39■■□□□ 1.66
VEGFA-209ENST00000425836 SHDQ96IW2 340 aa25.39■■□□□ 1.66
VEGFA-209ENST00000425836 TKTL2Q9H0I9 626 aa25.39■■□□□ 1.66
VEGFA-209ENST00000425836 MARK1Q9P0L2 795 aa25.39■■□□□ 1.66
VEGFA-209ENST00000425836 EIF3CLB5ME19 914 aaKnown RBP25.39■■□□□ 1.65
VEGFA-209ENST00000425836 I6L893 689 aaPredicted RBP25.39■■□□□ 1.65
VEGFA-209ENST00000425836 HOXC11O43248 304 aaPredicted RBP25.39■■□□□ 1.65
VEGFA-209ENST00000425836 NDUFA10O95299 355 aa25.39■■□□□ 1.65
VEGFA-209ENST00000425836 CD72P21854 359 aa25.39■■□□□ 1.65
VEGFA-209ENST00000425836 PSMA2P25787 234 aa25.39■■□□□ 1.65
VEGFA-209ENST00000425836 ZNF252P-AS1Q0IIN9 211 aa25.39■■□□□ 1.65
VEGFA-209ENST00000425836 EIF3CQ99613 913 aaKnown RBP25.39■■□□□ 1.65
VEGFA-209ENST00000425836 PAXBP1Q9Y5B6 917 aa25.39■■□□□ 1.65
VEGFA-209ENST00000425836 COL4A2P08572 1712 aa25.38■■□□□ 1.65
VEGFA-209ENST00000425836 MAN2B1O00754 1011 aa25.38■■□□□ 1.65
VEGFA-209ENST00000425836 TSPAN3O60637 253 aa25.38■■□□□ 1.65
VEGFA-209ENST00000425836 PDGFBP01127 241 aaPredicted RBP25.38■■□□□ 1.65
VEGFA-209ENST00000425836 MAGEA1P43355 309 aa25.38■■□□□ 1.65
VEGFA-209ENST00000425836 AMPD2Q01433 879 aa25.38■■□□□ 1.65
VEGFA-209ENST00000425836 NAIF1Q69YI7 327 aaPredicted RBP25.38■■□□□ 1.65
VEGFA-209ENST00000425836 RFWD3Q6PCD5 774 aa25.38■■□□□ 1.65
VEGFA-209ENST00000425836 ZNF852Q6ZMS4 543 aa25.38■■□□□ 1.65
VEGFA-209ENST00000425836 FAM3CQ92520 227 aa25.38■■□□□ 1.65
VEGFA-209ENST00000425836 DDX50Q9BQ39 737 aaKnown RBP25.38■■□□□ 1.65
VEGFA-209ENST00000425836 BBS2Q9BXC9 721 aa25.38■■□□□ 1.65
VEGFA-209ENST00000425836 INTUQ9ULD6 942 aa25.38■■□□□ 1.65
VEGFA-209ENST00000425836 NEDD8-MDP1E9PL57 170 aa25.37■■□□□ 1.65
VEGFA-209ENST00000425836 PAGE1O75459 146 aa25.37■■□□□ 1.65
VEGFA-209ENST00000425836 MTA1Q13330 715 aa25.37■■□□□ 1.65
VEGFA-209ENST00000425836 SPA17Q15506 151 aa25.37■■□□□ 1.65
VEGFA-209ENST00000425836 MS4A13Q5J8X5 152 aa25.37■■□□□ 1.65
VEGFA-209ENST00000425836 PIK3R6Q5UE93 754 aa25.37■■□□□ 1.65
VEGFA-209ENST00000425836 FYB2Q5VWT5 728 aa25.37■■□□□ 1.65
VEGFA-209ENST00000425836 BHMTQ93088 406 aa25.37■■□□□ 1.65
VEGFA-209ENST00000425836 TBC1D17Q9HA65 648 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms