RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 SYT15Q9BQS2 421 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 AGO3Q9H9G7 860 aaKnown RBP11.95□□□□□ -0.5
UBR4-207ENST00000425413 RXFP1Q9HBX9 757 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 ANLNQ9NQW6 1124 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 FZD10Q9ULW2 581 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 CHKBQ9Y259 395 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.94□□□□□ -0.5
UBR4-207ENST00000425413 F8W810 466 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 MRPS6P82932 125 aaKnown RBP11.94□□□□□ -0.5
UBR4-207ENST00000425413 PLEKHG4Q58EX7 1191 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 SLC26A11Q86WA9 606 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 RASAL3Q86YV0 1011 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 PPP1R10Q96QC0 940 aaKnown RBP11.94□□□□□ -0.5
UBR4-207ENST00000425413 ZIC5Q96T25 663 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 PRDM12Q9H4Q4 367 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 ZNF395Q9H8N7 513 aaPredicted RBP11.94□□□□□ -0.5
UBR4-207ENST00000425413 PCMTD2Q9NV79 361 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 COPEO14579 308 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 CBX6O95503 412 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 THP07101 528 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 KRT16P08779 473 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 GNAT1P11488 350 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 YY1P25490 414 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 PSMB4P28070 264 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 GMPRP36959 345 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 BRCC3P46736 316 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 BNIP1Q12981 228 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 CRHR2Q13324 411 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 SETDB1Q15047 1291 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 RTP4Q96DX8 246 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 P2RY11Q96G91 374 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 QKIQ96PU8 341 aaKnown RBP eCLIP11.94□□□□□ -0.5
UBR4-207ENST00000425413 LRRC37BQ96QE4 947 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 SRPK1Q96SB4 655 aaKnown RBP11.94□□□□□ -0.5
UBR4-207ENST00000425413 SMOQ99835 787 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 KATNAL1Q9BW62 490 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 MANSC1Q9H8J5 431 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 DDIT4Q9NX09 232 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 HAO1Q9UJM8 370 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 CCDC78A2IDD5 438 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 ARL5CA6NH57 179 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 UNCXA6NJT0 531 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 I6L893 689 aaPredicted RBP11.94□□□□□ -0.5
UBR4-207ENST00000425413 SMAPO00193 183 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 EEF2KO00418 725 aaKnown RBP11.94□□□□□ -0.5
UBR4-207ENST00000425413 APOEP02649 317 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 CHRNA1P02708 482 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 WARSP23381 471 aaKnown RBP11.94□□□□□ -0.5
UBR4-207ENST00000425413 CD52P31358 61 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 THPOP40225 353 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 GALNTL6Q49A17 601 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 SWT1Q5T5J6 900 aaKnown RBP11.94□□□□□ -0.5
UBR4-207ENST00000425413 CCDC91Q7Z6B0 441 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 TOP6BLQ8N6T0 577 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 ARMC2Q8NEN0 867 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 SIGLEC10Q96LC7 697 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 APBA2Q99767 749 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 FAM124BQ9H5Z6 455 aaPredicted RBP11.94□□□□□ -0.5
UBR4-207ENST00000425413 STARD13Q9Y3M8 1113 aa11.94□□□□□ -0.5
UBR4-207ENST00000425413 GCATO75600 419 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 B3GAT3O94766 335 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 FYNP06241 537 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 GSTA1P08263 222 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 MGAT1P26572 445 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 XKR4Q5GH76 650 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 C17orf99Q6UX52 265 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 PAXIP1Q6ZW49 1069 aaPredicted RBP11.93□□□□□ -0.5
UBR4-207ENST00000425413 STRADAQ7RTN6 431 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 FAM35AQ86V20 835 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 STKLD1Q8NE28 680 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 PGBD4Q96DM1 585 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 ATXN7L3BQ96GX2 97 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 APOL2Q9BQE5 337 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 PPCSQ9HAB8 311 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 USP3Q9Y6I4 520 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 AKR1A1P14550 325 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 NQO1P15559 274 aaKnown RBP11.93□□□□□ -0.5
UBR4-207ENST00000425413 ZFXP17010 805 aaPredicted RBP11.93□□□□□ -0.5
UBR4-207ENST00000425413 NOS2P35228 1153 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 TIGD5Q53EQ6 642 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 AGMOQ6ZNB7 445 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 PID1Q7Z2X4 250 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 MTDHQ86UE4 582 aaKnown RBP11.93□□□□□ -0.5
UBR4-207ENST00000425413 USP6NLQ92738 828 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 RNF34Q969K3 372 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 GRAMD1AQ96CP6 724 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 APOPT1Q96IL0 206 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 EBNA1BP2Q99848 306 aaKnown RBP11.93□□□□□ -0.5
UBR4-207ENST00000425413 MARCOQ9UEW3 520 aaPredicted RBP11.93□□□□□ -0.5
UBR4-207ENST00000425413 NUDT5Q9UKK9 219 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 STAP1Q9ULZ2 295 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 GABRQQ9UN88 632 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 USH1CQ9Y6N9 552 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 NUMBLQ9Y6R0 609 aa11.93□□□□□ -0.5
UBR4-207ENST00000425413 H3BRJ5 948 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 DAB1O75553 588 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 KRT37O76014 449 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 C1QAP02745 245 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 SNRPAP09012 282 aaKnown RBP11.92□□□□□ -0.5
UBR4-207ENST00000425413 KITP10721 976 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms