RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 TNFRSF13BO14836 293 aaPredicted RBP5.52□□□□□ -1.53
LINC01040-201ENST00000425048 MYF5P13349 255 aa5.52□□□□□ -1.53
LINC01040-201ENST00000425048 PBX1P40424 430 aa5.52□□□□□ -1.53
LINC01040-201ENST00000425048 GAB1Q13480 694 aa5.52□□□□□ -1.53
LINC01040-201ENST00000425048 C9orf50Q5SZB4 431 aa5.52□□□□□ -1.53
LINC01040-201ENST00000425048 RNF220Q5VTB9 566 aa5.52□□□□□ -1.53
LINC01040-201ENST00000425048 ARL14EPQ8N8R7 260 aaPredicted RBP5.52□□□□□ -1.53
LINC01040-201ENST00000425048 DNASE2BQ8WZ79 361 aa5.52□□□□□ -1.53
LINC01040-201ENST00000425048 PIMREGQ9BSJ6 248 aa5.52□□□□□ -1.53
LINC01040-201ENST00000425048 HTATIP2Q9BUP3 242 aa5.52□□□□□ -1.53
LINC01040-201ENST00000425048 SLC25A32Q9H2D1 315 aa5.52□□□□□ -1.53
LINC01040-201ENST00000425048 TBC1D23Q9NUY8 699 aa5.52□□□□□ -1.53
LINC01040-201ENST00000425048 TRIP12Q14669 1992 aaPredicted RBP5.52□□□□□ -1.53
LINC01040-201ENST00000425048 H0YGN5 161 aa5.51□□□□□ -1.53
LINC01040-201ENST00000425048 MT-ND5P03915 603 aa5.51□□□□□ -1.53
LINC01040-201ENST00000425048 MATN1P21941 496 aa5.51□□□□□ -1.53
LINC01040-201ENST00000425048 ZNF84P51523 738 aa5.51□□□□□ -1.53
LINC01040-201ENST00000425048 EPHB1P54762 984 aa5.51□□□□□ -1.53
LINC01040-201ENST00000425048 KEAP1Q14145 624 aa5.51□□□□□ -1.53
LINC01040-201ENST00000425048 POLD3Q15054 466 aaPredicted RBP5.51□□□□□ -1.53
LINC01040-201ENST00000425048 ODF3L2Q3SX64 289 aa5.51□□□□□ -1.53
LINC01040-201ENST00000425048 MINDY4Q4G0A6 757 aa5.51□□□□□ -1.53
LINC01040-201ENST00000425048 GLE1Q53GS7 698 aaKnown RBP5.51□□□□□ -1.53
LINC01040-201ENST00000425048 DGKKQ5KSL6 1271 aa5.51□□□□□ -1.53
LINC01040-201ENST00000425048 CXorf57Q6NSI4 855 aaKnown RBP5.51□□□□□ -1.53
LINC01040-201ENST00000425048 TMEM174Q8WUU8 243 aa5.51□□□□□ -1.53
LINC01040-201ENST00000425048 LRTOMTQ8WZ04 291 aa5.51□□□□□ -1.53
LINC01040-201ENST00000425048 CENPIQ92674 756 aaPredicted RBP5.51□□□□□ -1.53
LINC01040-201ENST00000425048 ZNF845Q96IR2 970 aaPredicted RBP5.51□□□□□ -1.53
LINC01040-201ENST00000425048 WDR83Q9BRX9 315 aaKnown RBP5.51□□□□□ -1.53
LINC01040-201ENST00000425048 HIF1ANQ9NWT6 349 aa5.51□□□□□ -1.53
LINC01040-201ENST00000425048 WNT16Q9UBV4 365 aa5.51□□□□□ -1.53
LINC01040-201ENST00000425048 EMSYQ7Z589 1322 aa5.5□□□□□ -1.53
LINC01040-201ENST00000425048 RPS10-NUDT3A0A1W2PQS6 291 aa5.5□□□□□ -1.53
LINC01040-201ENST00000425048 PDGFRBP09619 1106 aa5.5□□□□□ -1.53
LINC01040-201ENST00000425048 CHRNB1P11230 501 aa5.5□□□□□ -1.53
LINC01040-201ENST00000425048 AKR1A1P14550 325 aa5.5□□□□□ -1.53
LINC01040-201ENST00000425048 IGHMBP2P38935 993 aaKnown RBP5.5□□□□□ -1.53
LINC01040-201ENST00000425048 ENTPD1P49961 510 aa5.5□□□□□ -1.53
LINC01040-201ENST00000425048 EGR4Q05215 589 aa5.5□□□□□ -1.53
LINC01040-201ENST00000425048 C6orf10Q5SRN2 563 aa5.5□□□□□ -1.53
LINC01040-201ENST00000425048 LIPMQ5VYY2 423 aa5.5□□□□□ -1.53
LINC01040-201ENST00000425048 TTLL5Q6EMB2 1281 aa5.5□□□□□ -1.53
LINC01040-201ENST00000425048 ISM2Q6H9L7 571 aa5.5□□□□□ -1.53
LINC01040-201ENST00000425048 RNF44Q7L0R7 432 aa5.5□□□□□ -1.53
LINC01040-201ENST00000425048 ABHD5Q8WTS1 349 aa5.5□□□□□ -1.53
LINC01040-201ENST00000425048 GPATCH3Q96I76 525 aa5.5□□□□□ -1.53
LINC01040-201ENST00000425048 MSLNLQ96KJ4 702 aa5.5□□□□□ -1.53
LINC01040-201ENST00000425048 SNX22Q96L94 193 aa5.5□□□□□ -1.53
LINC01040-201ENST00000425048 ERVK-5Q9HDB9 667 aa5.5□□□□□ -1.53
LINC01040-201ENST00000425048 EVPLQ92817 2033 aa5.49□□□□□ -1.53
LINC01040-201ENST00000425048 DPPA5A6NC42 116 aa5.49□□□□□ -1.53
LINC01040-201ENST00000425048 MMP8P22894 467 aa5.49□□□□□ -1.53
LINC01040-201ENST00000425048 NDUFS1P28331 727 aa5.49□□□□□ -1.53
LINC01040-201ENST00000425048 HOXA11P31270 313 aaPredicted RBP5.49□□□□□ -1.53
LINC01040-201ENST00000425048 SLC39A5Q6ZMH5 540 aa5.49□□□□□ -1.53
LINC01040-201ENST00000425048 NR4A3Q92570 626 aa5.49□□□□□ -1.53
LINC01040-201ENST00000425048 TRIM2Q9C040 744 aa5.49□□□□□ -1.53
LINC01040-201ENST00000425048 TASP1Q9H6P5 420 aa5.49□□□□□ -1.53
LINC01040-201ENST00000425048 RXFP3Q9NSD7 469 aa5.49□□□□□ -1.53
LINC01040-201ENST00000425048 GJB4Q9NTQ9 266 aa5.49□□□□□ -1.53
LINC01040-201ENST00000425048 PLK2Q9NYY3 685 aa5.49□□□□□ -1.53
LINC01040-201ENST00000425048 UTS2RQ9UKP6 389 aa5.49□□□□□ -1.53
LINC01040-201ENST00000425048 A6NNC1 897 aa5.48□□□□□ -1.53
LINC01040-201ENST00000425048 MGEA5O60502 916 aa5.48□□□□□ -1.53
LINC01040-201ENST00000425048 SGPL1O95470 568 aa5.48□□□□□ -1.53
LINC01040-201ENST00000425048 ANAPC15P60006 121 aa5.48□□□□□ -1.53
LINC01040-201ENST00000425048 BFSP2Q13515 415 aa5.48□□□□□ -1.53
LINC01040-201ENST00000425048 ARHGAP29Q52LW3 1261 aa5.48□□□□□ -1.53
LINC01040-201ENST00000425048 DARS2Q6PI48 645 aaKnown RBP5.48□□□□□ -1.53
LINC01040-201ENST00000425048 DHRS13Q6UX07 377 aa5.48□□□□□ -1.53
LINC01040-201ENST00000425048 KYAT3Q6YP21 454 aaKnown RBP5.48□□□□□ -1.53
LINC01040-201ENST00000425048 RHPN2Q8IUC4 686 aa5.48□□□□□ -1.53
LINC01040-201ENST00000425048 ELP5Q8TE02 316 aa5.48□□□□□ -1.53
LINC01040-201ENST00000425048 EME1Q96AY2 570 aa5.48□□□□□ -1.53
LINC01040-201ENST00000425048 CD93Q9NPY3 652 aa5.48□□□□□ -1.53
LINC01040-201ENST00000425048 DRD1P21728 446 aa5.47□□□□□ -1.53
LINC01040-201ENST00000425048 AGTR2P50052 363 aa5.47□□□□□ -1.53
LINC01040-201ENST00000425048 GAD2Q05329 585 aa5.47□□□□□ -1.53
LINC01040-201ENST00000425048 PGM5Q15124 567 aa5.47□□□□□ -1.53
LINC01040-201ENST00000425048 ELF2Q15723 593 aa5.47□□□□□ -1.53
LINC01040-201ENST00000425048 SLC4A8Q2Y0W8 1093 aa5.47□□□□□ -1.53
LINC01040-201ENST00000425048 ANXA2RQ3ZCQ2 193 aa5.47□□□□□ -1.53
LINC01040-201ENST00000425048 FAM90A2PQ658T7 463 aa5.47□□□□□ -1.53
LINC01040-201ENST00000425048 TRILQ7L0X0 811 aa5.47□□□□□ -1.53
LINC01040-201ENST00000425048 CUZD1Q86UP6 607 aa5.47□□□□□ -1.53
LINC01040-201ENST00000425048 NR2C2APQ86WQ0 139 aa5.47□□□□□ -1.53
LINC01040-201ENST00000425048 FAM47BQ8NA70 645 aa5.47□□□□□ -1.53
LINC01040-201ENST00000425048 OR52L2PQ8NGH6 319 aa5.47□□□□□ -1.53
LINC01040-201ENST00000425048 STAG1Q8WVM7 1258 aa5.47□□□□□ -1.53
LINC01040-201ENST00000425048 PMM1Q92871 262 aa5.47□□□□□ -1.53
LINC01040-201ENST00000425048 STRBPQ96SI9 672 aaKnown RBP5.47□□□□□ -1.53
LINC01040-201ENST00000425048 AAMDCQ9H7C9 122 aa5.47□□□□□ -1.53
LINC01040-201ENST00000425048 ZBTB26Q9HCK0 441 aa5.47□□□□□ -1.53
LINC01040-201ENST00000425048 TMOD4Q9NZQ9 345 aa5.47□□□□□ -1.53
LINC01040-201ENST00000425048 GOLIM4O00461 696 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 CCNT2O60583 730 aaKnown RBP5.46□□□□□ -1.54
LINC01040-201ENST00000425048 IGSF3O75054 1194 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 CBFA2T3O75081 653 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 IFNA2P01563 188 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms