RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 CASP4P49662 377 aa16.32■□□□□ 0.2
RPUSD3-204ENST00000424438 ENPEPQ07075 957 aa16.32■□□□□ 0.2
RPUSD3-204ENST00000424438 KIF19Q2TAC6 998 aa16.32■□□□□ 0.2
RPUSD3-204ENST00000424438 FAM173BQ6P4H8 233 aa16.32■□□□□ 0.2
RPUSD3-204ENST00000424438 LRRC69Q6ZNQ3 347 aa16.32■□□□□ 0.2
RPUSD3-204ENST00000424438 NELFCDQ8IXH7 590 aa16.32■□□□□ 0.2
RPUSD3-204ENST00000424438 ARHGAP18Q8N392 663 aa16.32■□□□□ 0.2
RPUSD3-204ENST00000424438 C12orf29Q8N999 325 aa16.32■□□□□ 0.2
RPUSD3-204ENST00000424438 CYFIP2Q96F07 1278 aa16.32■□□□□ 0.2
RPUSD3-204ENST00000424438 FAXDC2Q96IV6 333 aa16.32■□□□□ 0.2
RPUSD3-204ENST00000424438 NT5C1AQ9BXI3 368 aa16.32■□□□□ 0.2
RPUSD3-204ENST00000424438 IRX2Q9BZI1 471 aaPredicted RBP16.32■□□□□ 0.2
RPUSD3-204ENST00000424438 UBXN6Q9BZV1 441 aa16.32■□□□□ 0.2
RPUSD3-204ENST00000424438 LHX5Q9H2C1 402 aa16.32■□□□□ 0.2
RPUSD3-204ENST00000424438 TMEM245Q9H330 911 aa16.32■□□□□ 0.2
RPUSD3-204ENST00000424438 FAM49BQ9NUQ9 324 aa16.32■□□□□ 0.2
RPUSD3-204ENST00000424438 NAGPAQ9UK23 515 aa16.32■□□□□ 0.2
RPUSD3-204ENST00000424438 CYSRT1A8MQ03 144 aa16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 MDM4O15151 490 aa16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 MAPK13O15264 365 aa16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 TSPAN3O60637 253 aa16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 EPHX1P07099 455 aa16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 CD27P26842 260 aa16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 CORO1AP31146 461 aaKnown RBP16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 CTSKP43235 329 aa16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 CSNK1EP49674 416 aaKnown RBP16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 CEBPZQ03701 1054 aaKnown RBP16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 SERPINA13PQ6UXR4 307 aa16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 SV2AQ7L0J3 742 aa16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 ZNF843Q8N446 348 aa16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 BHMTQ93088 406 aa16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 NXPE2Q96DL1 559 aa16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 DUSP16Q9BY84 665 aa16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 UPF2Q9HAU5 1272 aaKnown RBP16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 SGK2Q9HBY8 427 aa16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 TM9SF3Q9HD45 589 aa16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 AGO1Q9UL18 857 aaKnown RBP16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 SNX11Q9Y5W9 270 aa16.31■□□□□ 0.2
RPUSD3-204ENST00000424438 COL6A6A6NMZ7 2263 aa16.3■□□□□ 0.2
RPUSD3-204ENST00000424438 SEMA4FO95754 770 aa16.3■□□□□ 0.2
RPUSD3-204ENST00000424438 LATS1O95835 1130 aa16.3■□□□□ 0.2
RPUSD3-204ENST00000424438 HLA-EP13747 358 aa16.3■□□□□ 0.2
RPUSD3-204ENST00000424438 ADORA2BP29275 332 aa16.3■□□□□ 0.2
RPUSD3-204ENST00000424438 STK38Q15208 465 aa16.3■□□□□ 0.2
RPUSD3-204ENST00000424438 TMEM215Q68D42 235 aa16.3■□□□□ 0.2
RPUSD3-204ENST00000424438 KIAA0907Q7Z7F0 614 aaPredicted RBP16.3■□□□□ 0.2
RPUSD3-204ENST00000424438 CACTIN-AS1Q8N1I8 211 aa16.3■□□□□ 0.2
RPUSD3-204ENST00000424438 GOLGA1Q92805 767 aa16.3■□□□□ 0.2
RPUSD3-204ENST00000424438 PLD4Q96BZ4 506 aa16.3■□□□□ 0.2
RPUSD3-204ENST00000424438 ERLEC1Q96DZ1 483 aa16.3■□□□□ 0.2
RPUSD3-204ENST00000424438 INTS4Q96HW7 963 aaKnown RBP16.3■□□□□ 0.2
RPUSD3-204ENST00000424438 BTBD1Q9H0C5 482 aa16.3■□□□□ 0.2
RPUSD3-204ENST00000424438 C6orf106Q9H6K1 298 aaPredicted RBP16.3■□□□□ 0.2
RPUSD3-204ENST00000424438 STOML2Q9UJZ1 356 aa16.3■□□□□ 0.2
RPUSD3-204ENST00000424438 STRIP2Q9ULQ0 834 aa16.3■□□□□ 0.2
RPUSD3-204ENST00000424438 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.3■□□□□ 0.2
RPUSD3-204ENST00000424438 ARID1BQ8NFD5 2236 aaPredicted RBP16.3■□□□□ 0.2
RPUSD3-204ENST00000424438 GOLGA8CPA6NN73 597 aa16.29■□□□□ 0.2
RPUSD3-204ENST00000424438 SPTLC2O15270 562 aa16.29■□□□□ 0.2
RPUSD3-204ENST00000424438 YKT6O15498 198 aa16.29■□□□□ 0.2
RPUSD3-204ENST00000424438 CUTAO60888 179 aa16.29■□□□□ 0.2
RPUSD3-204ENST00000424438 YEATS4O95619 227 aa16.29■□□□□ 0.2
RPUSD3-204ENST00000424438 ACSL1P33121 698 aa16.29■□□□□ 0.2
RPUSD3-204ENST00000424438 TRIP4Q15650 581 aaPredicted RBP16.29■□□□□ 0.2
RPUSD3-204ENST00000424438 TTC39CQ8N584 583 aa16.29■□□□□ 0.2
RPUSD3-204ENST00000424438 DHX58Q96C10 678 aa16.29■□□□□ 0.2
RPUSD3-204ENST00000424438 TWNKQ96RR1 684 aa16.29■□□□□ 0.2
RPUSD3-204ENST00000424438 ORAI3Q9BRQ5 295 aa16.29■□□□□ 0.2
RPUSD3-204ENST00000424438 CIPCQ9C0C6 399 aa16.29■□□□□ 0.2
RPUSD3-204ENST00000424438 PRORYQ9H606 182 aa16.29■□□□□ 0.2
RPUSD3-204ENST00000424438 MARCH2Q9P0N8 246 aa16.29■□□□□ 0.2
RPUSD3-204ENST00000424438 FTSJ1Q9UET6 329 aa16.29■□□□□ 0.2
RPUSD3-204ENST00000424438 NUDT5Q9UKK9 219 aa16.29■□□□□ 0.2
RPUSD3-204ENST00000424438 TPX2Q9ULW0 747 aaKnown RBP16.29■□□□□ 0.2
RPUSD3-204ENST00000424438 SCML1Q9UN30 329 aa16.29■□□□□ 0.2
RPUSD3-204ENST00000424438 MTMR6Q9Y217 621 aa16.29■□□□□ 0.2
RPUSD3-204ENST00000424438 A0A1B0GTQ1 180 aa16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 C10orf142B7Z368 130 aa16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 PDXKO00764 312 aa16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 VILLO15195 856 aa16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 RRP8O43159 456 aaKnown RBP16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 HOXD9P28356 352 aaPredicted RBP16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 HNF1BP35680 557 aa16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 BCAT1P54687 386 aa16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 MCCD1P59942 119 aaPredicted RBP16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 RACK1P63244 317 aaKnown RBP16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 ARID5AQ03989 594 aa16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 TTC31Q49AM3 519 aaPredicted RBP16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 MPPE1Q53F39 396 aa16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 RAB41Q5JT25 222 aa16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 USP30Q70CQ3 517 aa16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 MARCH9Q86YJ5 346 aa16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 BIRC7Q96CA5 298 aa16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 FCRL3Q96P31 734 aaPredicted RBP16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 IMPG2Q9BZV3 1241 aa16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 NRSN2Q9GZP1 204 aa16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 SLC39A2Q9NP94 309 aa16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 OLA1Q9NTK5 396 aaKnown RBP16.28■□□□□ 0.2
RPUSD3-204ENST00000424438 RASAL2Q9UJF2 1139 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms