RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 RPS14P62263 151 aaKnown RBP6.66□□□□□ -1.34
SDCBP-203ENST00000424270 SKOR1P84550 965 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 NR5A1Q13285 461 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 EIF4HQ15056 248 aaKnown RBP6.66□□□□□ -1.34
SDCBP-203ENST00000424270 NPY5RQ15761 445 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 CDKN3Q16667 212 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 MDH1BQ5I0G3 518 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 SV2AQ7L0J3 742 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 CLEC14AQ86T13 490 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 TICAM1Q8IUC6 712 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 PLPP6Q8IY26 295 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 NUP93Q8N1F7 819 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 FBXO39Q8N4B4 442 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 OR4C6Q8NH72 309 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 NOC3LQ8WTT2 800 aaKnown RBP6.66□□□□□ -1.34
SDCBP-203ENST00000424270 WBP2Q969T9 261 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 APOLD1Q96LR9 279 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 CEP295NLQ96MC4 621 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 TTLL2Q9BWV7 592 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 CCSER1Q9C0I3 900 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 HAPLN2Q9GZV7 340 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 ASB7Q9H672 318 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 C17orf75Q9HAS0 396 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 CASS4Q9NQ75 786 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 MARK1Q9P0L2 795 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 TJP2Q9UDY2 1190 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 ITGB1BP2Q9UKP3 347 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 CDH9Q9ULB4 789 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 C2CD2Q9Y426 696 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 ENTPD2Q9Y5L3 495 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 BOD1L1Q8NFC6 3051 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 TBC1D3DA0A087WVF3 549 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 TBC1D3IA0A087WXS9 549 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 TBC1D3EA0A087X179 549 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 TBC1D3KA0A087X1G2 549 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 A0A1W2PP55 124 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 TBC1D3FA6NER0 549 aaPredicted RBP6.65□□□□□ -1.34
SDCBP-203ENST00000424270 NEMP2A6NFY4 417 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 TBC1D3LB9A6J9 549 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 E9PMD0 336 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 WNT9AO14904 365 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 PLD2O14939 933 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 TIMM44O43615 452 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 IGHDP01880 384 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 TBC1D3HP0C7X1 549 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 PLS3P13797 630 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 PLCG1P19174 1290 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 ACO1P21399 889 aaKnown RBP6.65□□□□□ -1.34
SDCBP-203ENST00000424270 TGM2P21980 687 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 MAT2AP31153 395 aaKnown RBP6.65□□□□□ -1.34
SDCBP-203ENST00000424270 GALCP54803 685 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 CAMK2GQ13555 558 aaPredicted RBP6.65□□□□□ -1.34
SDCBP-203ENST00000424270 SPIDRQ14159 915 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 POM121L1PQ3SYA9 428 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 EARS2Q5JPH6 523 aaKnown RBP6.65□□□□□ -1.34
SDCBP-203ENST00000424270 ADALQ6DHV7 355 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 TBC1D3GQ6DHY5 549 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 TBC1D3CQ6IPX1 549 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 NAPEPLDQ6IQ20 393 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 HTR3DQ70Z44 454 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 EFL1Q7Z2Z2 1120 aaKnown RBP6.65□□□□□ -1.34
SDCBP-203ENST00000424270 PRPF39Q86UA1 669 aaKnown RBP6.65□□□□□ -1.34
SDCBP-203ENST00000424270 OSTM1Q86WC4 334 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 FAM114A1Q8IWE2 563 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 TBC1D3Q8IZP1 549 aaPredicted RBP6.65□□□□□ -1.34
SDCBP-203ENST00000424270 CSGALNACT2Q8N6G5 542 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 TEX19Q8NA77 164 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 TMEM161BQ8NDZ6 487 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 OR2T34Q8NGX1 318 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 OR14C36Q8NHC7 312 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 SNX29Q8TEQ0 813 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 DDI1Q8WTU0 396 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 CYB5D2Q8WUJ1 264 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 PTCD2Q8WV60 388 aaKnown RBP6.65□□□□□ -1.34
SDCBP-203ENST00000424270 MIB2Q96AX9 1013 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 C8orf48Q96LL4 319 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 ORAI3Q9BRQ5 295 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 MED10Q9BTT4 135 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 RUSC1Q9BVN2 902 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 STRADBQ9C0K7 418 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 SNX25Q9H3E2 840 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 FBRSQ9HAH7 460 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 GJB4Q9NTQ9 266 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 UCKL1Q9NWZ5 548 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 SEL1LQ9UBV2 794 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 PISDQ9UG56 409 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 CPSF3Q9UKF6 684 aaKnown RBP6.65□□□□□ -1.34
SDCBP-203ENST00000424270 SLC27A6Q9Y2P4 619 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 SNX14Q9Y5W7 946 aa6.65□□□□□ -1.34
SDCBP-203ENST00000424270 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.64□□□□□ -1.35
SDCBP-203ENST00000424270 A0A1W2PNU3 283 aaPredicted RBP6.64□□□□□ -1.35
SDCBP-203ENST00000424270 A0A1W2PR77 199 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 K7ENM7 598 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 TLR5O60602 858 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 DDAH2O95865 285 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 MUTP22033 750 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 DGKAP23743 735 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 ATP5C1P36542 298 aaKnown RBP6.64□□□□□ -1.35
SDCBP-203ENST00000424270 ST8SIA6P61647 398 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 ZNF177Q13360 481 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms