RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 FAM133BQ5BKY9 247 aaKnown RBP19.19■□□□□ 0.66
HDAC6-205ENST00000423941 ZC3H12AQ5D1E8 599 aaKnown RBP19.19■□□□□ 0.66
HDAC6-205ENST00000423941 FYB2Q5VWT5 728 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 NADSYN1Q6IA69 706 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 PLEKHA7Q6IQ23 1121 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 FSTL4Q6MZW2 842 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 C12orf40Q86WS4 652 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 SUGP1Q8IWZ8 645 aaKnown RBP19.19■□□□□ 0.66
HDAC6-205ENST00000423941 JOSD2Q8TAC2 188 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 EZH1Q92800 747 aaPredicted RBP19.19■□□□□ 0.66
HDAC6-205ENST00000423941 CD101Q93033 1021 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 P2RY13Q9BPV8 354 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 METTL5Q9NRN9 209 aaKnown RBP19.19■□□□□ 0.66
HDAC6-205ENST00000423941 ABHD10Q9NUJ1 306 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 DDIT4Q9NX09 232 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 STAP1Q9ULZ2 295 aa19.19■□□□□ 0.66
HDAC6-205ENST00000423941 SSU72P8A0A1W2PR75 194 aa19.18■□□□□ 0.66
HDAC6-205ENST00000423941 M0QYT0 321 aa19.18■□□□□ 0.66
HDAC6-205ENST00000423941 STK25O00506 426 aa19.18■□□□□ 0.66
HDAC6-205ENST00000423941 NCAM2O15394 837 aa19.18■□□□□ 0.66
HDAC6-205ENST00000423941 F9P00740 461 aa19.18■□□□□ 0.66
HDAC6-205ENST00000423941 SLC2A3P11169 496 aa19.18■□□□□ 0.66
HDAC6-205ENST00000423941 CHRM1P11229 460 aaPredicted RBP19.18■□□□□ 0.66
HDAC6-205ENST00000423941 KRT3P12035 628 aa19.18■□□□□ 0.66
HDAC6-205ENST00000423941 DRD1P21728 446 aa19.18■□□□□ 0.66
HDAC6-205ENST00000423941 RRM1P23921 792 aa19.18■□□□□ 0.66
HDAC6-205ENST00000423941 RFC1P35251 1148 aaPredicted RBP19.18■□□□□ 0.66
HDAC6-205ENST00000423941 MAGEA9P43362 315 aa19.18■□□□□ 0.66
HDAC6-205ENST00000423941 PTPN9P43378 593 aa19.18■□□□□ 0.66
HDAC6-205ENST00000423941 SLC11A2P49281 568 aa19.18■□□□□ 0.66
HDAC6-205ENST00000423941 ADKP55263 362 aaKnown RBP19.18■□□□□ 0.66
HDAC6-205ENST00000423941 TDRD12Q587J7 1177 aaKnown RBP19.18■□□□□ 0.66
HDAC6-205ENST00000423941 TMC6Q7Z403 805 aa19.18■□□□□ 0.66
HDAC6-205ENST00000423941 SYNPOQ8N3V7 929 aa19.18■□□□□ 0.66
HDAC6-205ENST00000423941 TC2NQ8N9U0 490 aa19.18■□□□□ 0.66
HDAC6-205ENST00000423941 CENPIQ92674 756 aaPredicted RBP19.18■□□□□ 0.66
HDAC6-205ENST00000423941 BTN2A3PQ96KV6 586 aa19.18■□□□□ 0.66
HDAC6-205ENST00000423941 TBCBQ99426 244 aa19.18■□□□□ 0.66
HDAC6-205ENST00000423941 PIGVQ9NUD9 493 aa19.18■□□□□ 0.66
HDAC6-205ENST00000423941 AKR1B15C9JRZ8 316 aaPredicted RBP19.17■□□□□ 0.66
HDAC6-205ENST00000423941 DCNP07585 359 aaKnown RBP19.17■□□□□ 0.66
HDAC6-205ENST00000423941 TPM1P09493 284 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 TYRP14679 529 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 SLC6A4P31645 630 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 CCR1P32246 355 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 SLC6A11P48066 632 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 MESP2Q0VG99 397 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 MTA1Q13330 715 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 CCDC14Q49A88 953 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 DGKKQ5KSL6 1271 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 MPP7Q5T2T1 576 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 PIK3R6Q5UE93 754 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 TPGS1Q6ZTW0 290 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 PHLDB2Q86SQ0 1253 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 VPS36Q86VN1 386 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 CNGA4Q8IV77 575 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 EMC1Q8N766 993 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 RXFP2Q8WXD0 754 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 EXOC4Q96A65 974 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 CFAP57Q96MR6 1250 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 PRMT1Q99873 361 aaKnown RBP19.17■□□□□ 0.66
HDAC6-205ENST00000423941 BBS2Q9BXC9 721 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 CHRDQ9H2X0 955 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 LMAN1LQ9HAT1 526 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 ARHGEF38Q9NXL2 777 aa19.17■□□□□ 0.66
HDAC6-205ENST00000423941 XPO7Q9UIA9 1087 aaKnown RBP19.17■□□□□ 0.66
HDAC6-205ENST00000423941 NDRG2Q9UN36 371 aaKnown RBP19.17■□□□□ 0.66
HDAC6-205ENST00000423941 TMCO5BA8MYB1 307 aa19.16■□□□□ 0.66
HDAC6-205ENST00000423941 I6L893 689 aaPredicted RBP19.16■□□□□ 0.66
HDAC6-205ENST00000423941 TULP3O75386 442 aa19.16■□□□□ 0.66
HDAC6-205ENST00000423941 GJB6O95452 261 aa19.16■□□□□ 0.66
HDAC6-205ENST00000423941 CISD3P0C7P0 127 aa19.16■□□□□ 0.66
HDAC6-205ENST00000423941 PDGFRAP16234 1089 aa19.16■□□□□ 0.66
HDAC6-205ENST00000423941 EIF4A3P38919 411 aaKnown RBP19.16■□□□□ 0.66
HDAC6-205ENST00000423941 GRSF1Q12849 480 aaKnown RBP eCLIP19.16■□□□□ 0.66
HDAC6-205ENST00000423941 MAMLD1Q13495 774 aa19.16■□□□□ 0.66
HDAC6-205ENST00000423941 MPPE1Q53F39 396 aa19.16■□□□□ 0.66
HDAC6-205ENST00000423941 BRMS1LQ5PSV4 323 aa19.16■□□□□ 0.66
HDAC6-205ENST00000423941 ARTNQ5T4W7 220 aa19.16■□□□□ 0.66
HDAC6-205ENST00000423941 DNAAF5Q86Y56 855 aa19.16■□□□□ 0.66
HDAC6-205ENST00000423941 PNKPQ96T60 521 aa19.16■□□□□ 0.66
HDAC6-205ENST00000423941 CHP1Q99653 195 aa19.16■□□□□ 0.66
HDAC6-205ENST00000423941 IER2Q9BTL4 223 aa19.16■□□□□ 0.66
HDAC6-205ENST00000423941 SELENOOQ9BVL4 669 aa19.16■□□□□ 0.66
HDAC6-205ENST00000423941 FAM204AQ9H8W3 233 aa19.16■□□□□ 0.66
HDAC6-205ENST00000423941 ANLNQ9NQW6 1124 aa19.16■□□□□ 0.66
HDAC6-205ENST00000423941 GOLGA6L7A0A1B0GV03 622 aa19.15■□□□□ 0.66
HDAC6-205ENST00000423941 NEDD8-MDP1E9PL57 170 aa19.15■□□□□ 0.66
HDAC6-205ENST00000423941 K7EQS6 105 aa19.15■□□□□ 0.66
HDAC6-205ENST00000423941 APOEP02649 317 aa19.15■□□□□ 0.66
HDAC6-205ENST00000423941 SULT1E1P49888 294 aa19.15■□□□□ 0.66
HDAC6-205ENST00000423941 RPL7AP62424 266 aaKnown RBP19.15■□□□□ 0.66
HDAC6-205ENST00000423941 GAS6Q14393 721 aa19.15■□□□□ 0.66
HDAC6-205ENST00000423941 SLC18A3Q16572 532 aa19.15■□□□□ 0.66
HDAC6-205ENST00000423941 ANO4Q32M45 955 aa19.15■□□□□ 0.66
HDAC6-205ENST00000423941 FBXO43Q4G163 708 aa19.15■□□□□ 0.66
HDAC6-205ENST00000423941 ALKBH5Q6P6C2 394 aaKnown RBP19.15■□□□□ 0.66
HDAC6-205ENST00000423941 STRADAQ7RTN6 431 aa19.15■□□□□ 0.66
HDAC6-205ENST00000423941 ATP6V0D2Q8N8Y2 350 aa19.15■□□□□ 0.66
HDAC6-205ENST00000423941 TMA16Q96EY4 203 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms