RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 MPHOSPH6Q99547 160 aaKnown RBP16.3■□□□□ 0.2
CDH1-202ENST00000422392 SHCBP1LQ9BZQ2 653 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 XAB2Q9HCS7 855 aaKnown RBP16.3■□□□□ 0.2
CDH1-202ENST00000422392 KRT82Q9NSB4 513 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 SNTG2Q9NY99 539 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 EMCNQ9ULC0 261 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 PLA2G4CQ9UP65 541 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 C2CD2Q9Y426 696 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 DNAJC25-GNG10A0A024R161 153 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 SYNJ2BP-COX16A0A087WUM0 186 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 CCDC189A1A4V9 331 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 TPP1O14773 563 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 TTLL4Q14679 1199 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 DPYSL2Q16555 572 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 N4BP2L1Q5TBK1 243 aaPredicted RBP16.3■□□□□ 0.2
CDH1-202ENST00000422392 NCBP2-AS2Q69YL0 99 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 RIPOR1Q6ZS17 1223 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 SESTD1Q86VW0 696 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 ULK2Q8IYT8 1036 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 POU5F2Q8N7G0 328 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 MTBPQ96DY7 904 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 MOCS1Q9NZB8 636 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 COX16Q9P0S2 106 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 SLC7A8Q9UHI5 535 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 TAGLN3Q9UI15 199 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 KIAA1257Q9ULG3 409 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 NUP205Q92621 2012 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 TPSB2P20231 275 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 PSEN1P49768 467 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 MRPS35P82673 323 aaKnown RBP16.29■□□□□ 0.2
CDH1-202ENST00000422392 ARHGAP1Q07960 439 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 TPSAB1Q15661 275 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 CMPK2Q5EBM0 449 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 PPM1JQ5JR12 505 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 FAM91A1Q658Y4 838 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 POTEAQ6S8J7 498 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 FAM131BQ86XD5 332 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 GJD2Q9UKL4 321 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 DNAJC16Q9Y2G8 782 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 A0A0G2JLL6 359 aaPredicted RBP16.29■□□□□ 0.2
CDH1-202ENST00000422392 SPECC1L-ADORA2AF8WAN1 911 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 USP1O94782 785 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 NPTXRO95502 500 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 C6orf222P0C671 652 aaPredicted RBP16.29■□□□□ 0.2
CDH1-202ENST00000422392 MGAT1P26572 445 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 RAP1GDS1P52306 607 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 PDE1CQ14123 709 aaPredicted RBP16.29■□□□□ 0.2
CDH1-202ENST00000422392 PRRT2Q7Z6L0 340 aaPredicted RBP16.29■□□□□ 0.2
CDH1-202ENST00000422392 CFAP61Q8NHU2 1237 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 USP6NLQ92738 828 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 QKIQ96PU8 341 aaKnown RBP eCLIP16.29■□□□□ 0.2
CDH1-202ENST00000422392 TTC1Q99614 292 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 MKS1Q9NXB0 559 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 SEPT10Q9P0V9 454 aa16.29■□□□□ 0.2
CDH1-202ENST00000422392 LMO2P25791 158 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 GTF2A2P52657 109 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 PITX1P78337 314 aaPredicted RBP16.28■□□□□ 0.2
CDH1-202ENST00000422392 SLC25A3Q00325 362 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 CBLBQ13191 982 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 KIZQ2M2Z5 673 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 ZNF618Q5T7W0 954 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 TP53INP2Q8IXH6 220 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 ARHGAP24Q8N264 748 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 LINC01465Q8N7H1 131 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 COLGALT1Q8NBJ5 622 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 AFG1LQ8WV93 481 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 HTR3CQ8WXA8 447 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 PPP1R12CQ9BZL4 782 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 THAP1Q9NVV9 213 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 ZNF358Q9NW07 568 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 LRCH1Q9Y2L9 728 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 SDR42E2A6NKP2 422 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 A8MXQ7 604 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 MFSD11O43934 449 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 MAGEC1O60732 1142 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 TM7SF2O76062 418 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 SORBS2O94875 1100 aaKnown RBP16.28■□□□□ 0.2
CDH1-202ENST00000422392 SLC25A27O95847 323 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 FGF3P11487 239 aaPredicted RBP16.28■□□□□ 0.2
CDH1-202ENST00000422392 AP1B1Q10567 949 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 SEMA5AQ13591 1074 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 ZNF484Q5JVG2 852 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 VWA5B1Q5TIE3 1220 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 RNF220Q5VTB9 566 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 C1orf146Q5VVC0 180 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 MBLAC2Q68D91 279 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 ARMCX2Q7L311 632 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 RSPH3Q86UC2 560 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 PHC3Q8NDX5 983 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 ATXN7L3BQ96GX2 97 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 XPNPEP3Q9NQH7 507 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 PPP2R3BQ9Y5P8 575 aa16.28■□□□□ 0.2
CDH1-202ENST00000422392 BAG2O95816 211 aa16.27■□□□□ 0.2
CDH1-202ENST00000422392 SP100P23497 879 aaPredicted RBP16.27■□□□□ 0.2
CDH1-202ENST00000422392 ARRB2P32121 409 aa16.27■□□□□ 0.2
CDH1-202ENST00000422392 EIF2AQ9BY44 585 aaKnown RBP16.27■□□□□ 0.2
CDH1-202ENST00000422392 PNPOQ9NVS9 261 aa16.27■□□□□ 0.2
CDH1-202ENST00000422392 SHROOM3Q8TF72 1996 aa16.27■□□□□ 0.2
CDH1-202ENST00000422392 ADCY6O43306 1168 aa16.27■□□□□ 0.19
CDH1-202ENST00000422392 SERPINA6P08185 405 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms