RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 DNAJA2O60884 412 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 TMCC1O94876 653 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 ATP6V1B1P15313 513 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 IL4RP24394 825 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 SERPINB9P50453 376 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 CAPSQ13938 189 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 PDE1CQ14123 709 aaPredicted RBP21.92■■□□□ 1.1
USP48-205ENST00000421625 KRT81Q14533 505 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 PQLC3Q8N755 202 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 PIWIL1Q96J94 861 aaKnown RBP21.92■■□□□ 1.1
USP48-205ENST00000421625 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.92■■□□□ 1.1
USP48-205ENST00000421625 GRAP2O75791 330 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 MAGEA3P43357 314 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 MTTPP55157 894 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 RPL26P61254 145 aaKnown RBP21.92■■□□□ 1.1
USP48-205ENST00000421625 CNTN2Q02246 1040 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 B3GNT6Q6ZMB0 384 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 TIFABQ6ZNK6 161 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 TWNKQ96RR1 684 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 MAN1C1Q9NR34 630 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 RNF146Q9NTX7 359 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 DNAJC28Q9NX36 388 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 PCDHA11Q9Y5I1 949 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 E2F8A0AVK6 867 aa21.91■■□□□ 1.1
USP48-205ENST00000421625 ADCY6O43306 1168 aa21.91■■□□□ 1.1
USP48-205ENST00000421625 ZBTB14O43829 449 aa21.91■■□□□ 1.1
USP48-205ENST00000421625 SERPINE1P05121 402 aa21.91■■□□□ 1.1
USP48-205ENST00000421625 SUPT20HL2P0C7V6 817 aa21.91■■□□□ 1.1
USP48-205ENST00000421625 AP3M2P53677 418 aa21.91■■□□□ 1.1
USP48-205ENST00000421625 SUPT20HL1Q3ZLR7 823 aa21.91■■□□□ 1.1
USP48-205ENST00000421625 PAOXQ6QHF9 649 aa21.91■■□□□ 1.1
USP48-205ENST00000421625 PQLC1Q8N2U9 271 aa21.91■■□□□ 1.1
USP48-205ENST00000421625 LRRC39Q96DD0 335 aa21.91■■□□□ 1.1
USP48-205ENST00000421625 MCRS1Q96EZ8 462 aa21.91■■□□□ 1.1
USP48-205ENST00000421625 NLRP4Q96MN2 994 aa21.91■■□□□ 1.1
USP48-205ENST00000421625 CHCHD3Q9NX63 227 aaKnown RBP21.91■■□□□ 1.1
USP48-205ENST00000421625 APPL1Q9UKG1 709 aa21.91■■□□□ 1.1
USP48-205ENST00000421625 F5H423 210 aaPredicted RBP21.91■■□□□ 1.1
USP48-205ENST00000421625 PRKCGP05129 697 aa21.91■■□□□ 1.1
USP48-205ENST00000421625 COX4I1P13073 169 aa21.91■■□□□ 1.1
USP48-205ENST00000421625 MAGEA6P43360 314 aa21.91■■□□□ 1.1
USP48-205ENST00000421625 BCAR1P56945 870 aa21.91■■□□□ 1.1
USP48-205ENST00000421625 PRKG1Q13976 671 aa21.91■■□□□ 1.1
USP48-205ENST00000421625 PPP4R1Q8TF05 950 aa21.91■■□□□ 1.1
USP48-205ENST00000421625 MED7O43513 233 aa21.9■■□□□ 1.1
USP48-205ENST00000421625 DENRO43583 198 aaKnown RBP21.9■■□□□ 1.1
USP48-205ENST00000421625 ZNF143P52747 638 aaPredicted RBP21.9■■□□□ 1.1
USP48-205ENST00000421625 CRADDP78560 199 aa21.9■■□□□ 1.1
USP48-205ENST00000421625 OXCT2Q9BYC2 517 aaPredicted RBP21.9■■□□□ 1.1
USP48-205ENST00000421625 RHBDL2Q9NX52 303 aa21.9■■□□□ 1.1
USP48-205ENST00000421625 E9PBE3 544 aa21.9■■□□□ 1.1
USP48-205ENST00000421625 TBC1D12O60347 775 aa21.9■■□□□ 1.1
USP48-205ENST00000421625 KLHL41O60662 606 aa21.9■■□□□ 1.1
USP48-205ENST00000421625 MICAL2O94851 1124 aa21.9■■□□□ 1.1
USP48-205ENST00000421625 HPCAP84074 193 aa21.9■■□□□ 1.1
USP48-205ENST00000421625 MYLK3Q32MK0 819 aa21.9■■□□□ 1.1
USP48-205ENST00000421625 SCYL2Q6P3W7 929 aa21.9■■□□□ 1.1
USP48-205ENST00000421625 MCUQ8NE86 351 aa21.9■■□□□ 1.1
USP48-205ENST00000421625 ZFP28Q8NHY6 868 aa21.9■■□□□ 1.1
USP48-205ENST00000421625 RXFP2Q8WXD0 754 aa21.9■■□□□ 1.1
USP48-205ENST00000421625 SLC7A3Q8WY07 619 aa21.9■■□□□ 1.1
USP48-205ENST00000421625 CNBD2Q96M20 576 aa21.9■■□□□ 1.1
USP48-205ENST00000421625 RNPEPQ9H4A4 650 aa21.9■■□□□ 1.1
USP48-205ENST00000421625 APOL1O14791 398 aa21.89■■□□□ 1.1
USP48-205ENST00000421625 CRTAMO95727 393 aa21.89■■□□□ 1.1
USP48-205ENST00000421625 OATP04181 439 aa21.89■■□□□ 1.1
USP48-205ENST00000421625 OSTNP61366 133 aa21.89■■□□□ 1.1
USP48-205ENST00000421625 SP2Q02086 613 aa21.89■■□□□ 1.1
USP48-205ENST00000421625 CNGA3Q16281 694 aa21.89■■□□□ 1.1
USP48-205ENST00000421625 PPM1JQ5JR12 505 aa21.89■■□□□ 1.1
USP48-205ENST00000421625 DPH6Q7L8W6 267 aa21.89■■□□□ 1.1
USP48-205ENST00000421625 PCDH19Q8TAB3 1148 aa21.89■■□□□ 1.1
USP48-205ENST00000421625 RBM38Q9H0Z9 239 aaKnown RBP21.89■■□□□ 1.1
USP48-205ENST00000421625 MOCS1Q9NZB8 636 aa21.89■■□□□ 1.1
USP48-205ENST00000421625 PSMD13Q9UNM6 376 aa21.89■■□□□ 1.1
USP48-205ENST00000421625 COL4A5P29400 1685 aa21.89■■□□□ 1.09
USP48-205ENST00000421625 M0QYV0 167 aa21.89■■□□□ 1.09
USP48-205ENST00000421625 MAFGO15525 162 aa21.89■■□□□ 1.09
USP48-205ENST00000421625 PRPSAP2O60256 369 aa21.89■■□□□ 1.09
USP48-205ENST00000421625 GLRA3O75311 464 aa21.89■■□□□ 1.09
USP48-205ENST00000421625 FBXO21O94952 628 aa21.89■■□□□ 1.09
USP48-205ENST00000421625 KRT19P08727 400 aa21.89■■□□□ 1.09
USP48-205ENST00000421625 GPD1P21695 349 aa21.89■■□□□ 1.09
USP48-205ENST00000421625 RSBN1LQ6PCB5 846 aaPredicted RBP21.89■■□□□ 1.09
USP48-205ENST00000421625 UBA3Q8TBC4 463 aa21.89■■□□□ 1.09
USP48-205ENST00000421625 XPNPEP3Q9NQH7 507 aa21.89■■□□□ 1.09
USP48-205ENST00000421625 PIH1D1Q9NWS0 290 aaKnown RBP21.89■■□□□ 1.09
USP48-205ENST00000421625 BTBD7Q9P203 1132 aa21.89■■□□□ 1.09
USP48-205ENST00000421625 ARHGAP26Q9UNA1 814 aa21.89■■□□□ 1.09
USP48-205ENST00000421625 BCLAF3A2AJT9 711 aaKnown RBP21.88■■□□□ 1.09
USP48-205ENST00000421625 HOXC6P09630 235 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 PDGFRAP16234 1089 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 MYBPC1Q00872 1141 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 ACAP1Q15027 740 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 DBN1Q16643 649 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 CA9Q16790 459 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 NR2E3Q9Y5X4 410 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 PSAT1Q9Y617 370 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 WDR27A2RRH5 827 aa21.88■■□□□ 1.09
USP48-205ENST00000421625 TMEM259Q4ZIN3 620 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms