RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 SYCP1Q15431 976 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 CCDC184Q52MB2 194 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 FAM209BQ5JX69 171 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 IZUMO3Q5VZ72 239 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 IL31Q6EBC2 164 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 VSTM1Q6UX27 236 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 P3H2Q8IVL5 708 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 HSCBQ8IWL3 235 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 OR2C3Q8N628 320 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 RNF152Q8N8N0 203 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 C11orf44Q8N8P7 122 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 MNS1Q8NEH6 495 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 ADAMTS18Q8TE60 1221 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 ZNF566Q969W8 418 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 COQ8BQ96D53 544 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 VCPIP1Q96JH7 1222 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 RIPOR3Q96MK2 946 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 HS6ST2Q96MM7 605 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 MMS19Q96T76 1030 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 NCAPGQ9BPX3 1015 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 CINPQ9BW66 212 aaPredicted RBP3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 CERS4Q9HA82 394 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 VPS51Q9UID3 782 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 PHTF1Q9UMS5 762 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 SLC27A6Q9Y2P4 619 aa3.82□□□□□ -1.8
SDCBPP3-201ENST00000419629 VIRMAQ69YN4 1812 aaKnown RBP3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 UNC13AQ9UPW8 1703 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 RUSC2Q8N2Y8 1516 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 FAM90A10PA6NDY2 464 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 TMEM232C9JQI7 657 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 FCHO1O14526 889 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 KCNQ3O43525 872 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 FGF18O76093 207 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 HARSP12081 509 aaKnown RBP3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 ATP5F1P24539 256 aaPredicted RBP3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 NTSR1P30989 418 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 SSR1P43307 286 aaKnown RBP3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 RENBPP51606 427 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 NEK3P51956 506 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 GTF2A1P52655 376 aaPredicted RBP3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 COPB1P53618 953 aaKnown RBP3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 GHRHRQ02643 423 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 LMAN2Q12907 356 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 PMS2P11Q13670 270 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 FAM187BQ17R55 369 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 KLHL40Q2TBA0 621 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 HIBCHQ6NVY1 386 aaPredicted RBP3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 TMEM65Q6PI78 240 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 CRTC1Q6UUV9 634 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 USP49Q70CQ1 688 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 MEPCEQ7L2J0 689 aaKnown RBP3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 SKAP1Q86WV1 359 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 FAM186BQ8IYM0 893 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 C16orf71Q8IYS4 520 aaPredicted RBP3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 PNPLA1Q8N8W4 532 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 DEPTORQ8TB45 409 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 PMM1Q92871 262 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 GRAMD1AQ96CP6 724 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 ELAC2Q9BQ52 826 aaKnown RBP3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 SELENOOQ9BVL4 669 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 ARFGAP3Q9NP61 516 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 TM7SF3Q9NS93 570 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 RAI14Q9P0K7 980 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 ZNF112Q9UJU3 913 aa3.81□□□□□ -1.8
SDCBPP3-201ENST00000419629 MROH2BQ7Z745 1585 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 KDM5BQ9UGL1 1544 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 UHRF1BP1LA0JNW5 1464 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 NLRP1Q9C000 1473 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 RAPGEF2Q9Y4G8 1499 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 ARHGAP31Q2M1Z3 1444 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 NCOA3Q9Y6Q9 1424 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 KIF15Q9NS87 1388 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 RAD50Q92878 1312 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 LY6G6EA0A0G2JKS1 128 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 H3BNX3 289 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 PODXLO00592 558 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 SPRY2O43597 315 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 WDR47O94967 919 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 OAZ2O95190 189 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 MT-CO3P00414 261 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 TPM3P06753 285 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 FPR3P25089 353 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 YY1P25490 414 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 DIO1P49895 249 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 ALDH5A1P51649 535 aaPredicted RBP3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 PSG6Q00889 435 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 NSUN2Q08J23 767 aaKnown RBP eCLIP3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 BRD3Q15059 726 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 TWIST1Q15672 202 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 SLC5A9Q2M3M2 681 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 RNASE12Q5GAN4 147 aaKnown RBP3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 ARL6IP4Q66PJ3 421 aaKnown RBP3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 TLDC1Q6P9B6 456 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 DCDC5Q6ZRR9 648 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 BCDIN3DQ7Z5W3 292 aaKnown RBP3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 SRLQ86TD4 932 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 EGFL6Q8IUX8 553 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 CCDC28AQ8IWP9 274 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 C12orf76Q8N812 135 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms