RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 NDRG2Q9UN36 371 aaKnown RBP19.4■□□□□ 0.7
PTCD3-204ENST00000418628 C2CD4BA6NLJ0 364 aa19.39■□□□□ 0.69
PTCD3-204ENST00000418628 KCNU1A8MYU2 1149 aa19.39■□□□□ 0.69
PTCD3-204ENST00000418628 GOLGA8SH3BPF8 625 aa19.39■□□□□ 0.69
PTCD3-204ENST00000418628 DCNP07585 359 aaKnown RBP19.39■□□□□ 0.69
PTCD3-204ENST00000418628 GALK1P51570 392 aa19.39■□□□□ 0.69
PTCD3-204ENST00000418628 ZNF75DP51815 510 aa19.39■□□□□ 0.69
PTCD3-204ENST00000418628 PPP2R5DQ14738 602 aa19.39■□□□□ 0.69
PTCD3-204ENST00000418628 SLC25A52Q3SY17 297 aa19.39■□□□□ 0.69
PTCD3-204ENST00000418628 ADGRF1Q5T601 910 aa19.39■□□□□ 0.69
PTCD3-204ENST00000418628 IER2Q9BTL4 223 aa19.39■□□□□ 0.69
PTCD3-204ENST00000418628 ISCUQ9H1K1 167 aa19.39■□□□□ 0.69
PTCD3-204ENST00000418628 FBXO10Q9UK96 956 aa19.39■□□□□ 0.69
PTCD3-204ENST00000418628 STAP1Q9ULZ2 295 aa19.39■□□□□ 0.69
PTCD3-204ENST00000418628 A0A0A0MRY4 1105 aa19.38■□□□□ 0.69
PTCD3-204ENST00000418628 ACSL4O60488 711 aa19.38■□□□□ 0.69
PTCD3-204ENST00000418628 ENDOD1O94919 500 aa19.38■□□□□ 0.69
PTCD3-204ENST00000418628 SLC6A4P31645 630 aa19.38■□□□□ 0.69
PTCD3-204ENST00000418628 GAS6Q14393 721 aa19.38■□□□□ 0.69
PTCD3-204ENST00000418628 TDRD12Q587J7 1177 aaKnown RBP19.38■□□□□ 0.69
PTCD3-204ENST00000418628 DGKKQ5KSL6 1271 aa19.38■□□□□ 0.69
PTCD3-204ENST00000418628 MAMSTRQ6ZN01 415 aa19.38■□□□□ 0.69
PTCD3-204ENST00000418628 SYNPOQ8N3V7 929 aa19.38■□□□□ 0.69
PTCD3-204ENST00000418628 JOSD2Q8TAC2 188 aa19.38■□□□□ 0.69
PTCD3-204ENST00000418628 ANP32EQ9BTT0 268 aa19.38■□□□□ 0.69
PTCD3-204ENST00000418628 FAM204AQ9H8W3 233 aa19.38■□□□□ 0.69
PTCD3-204ENST00000418628 PIGVQ9NUD9 493 aa19.38■□□□□ 0.69
PTCD3-204ENST00000418628 ABHD10Q9NUJ1 306 aa19.38■□□□□ 0.69
PTCD3-204ENST00000418628 DDIT4Q9NX09 232 aa19.38■□□□□ 0.69
PTCD3-204ENST00000418628 SIGLEC16A6NMB1 481 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 I6L893 689 aaPredicted RBP19.37■□□□□ 0.69
PTCD3-204ENST00000418628 NCAM2O15394 837 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 TULP3O75386 442 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 GJB6O95452 261 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 EGFP01133 1207 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 TYRP14679 529 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 DRD1P21728 446 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 HOXD9P28356 352 aaPredicted RBP19.37■□□□□ 0.69
PTCD3-204ENST00000418628 PTPN9P43378 593 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 SLC6A11P48066 632 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 CXCR3P49682 368 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 LRRC32Q14392 662 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 ASTE1Q2TB18 679 aaPredicted RBP19.37■□□□□ 0.69
PTCD3-204ENST00000418628 ZC3H12AQ5D1E8 599 aaKnown RBP19.37■□□□□ 0.69
PTCD3-204ENST00000418628 PLEKHA7Q6IQ23 1121 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 TPGS1Q6ZTW0 290 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 EMC1Q8N766 993 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 OR8K1Q8NGG5 319 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 BTN2A3PQ96KV6 586 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 PRICKLE1Q96MT3 831 aaPredicted RBP19.37■□□□□ 0.69
PTCD3-204ENST00000418628 TBCBQ99426 244 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 PRMT1Q99873 361 aaKnown RBP19.37■□□□□ 0.69
PTCD3-204ENST00000418628 BBS2Q9BXC9 721 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 TMEM51Q9NW97 253 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.37■□□□□ 0.69
PTCD3-204ENST00000418628 XPO7Q9UIA9 1087 aaKnown RBP19.37■□□□□ 0.69
PTCD3-204ENST00000418628 NUP205Q92621 2012 aa19.37■□□□□ 0.69
PTCD3-204ENST00000418628 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.36■□□□□ 0.69
PTCD3-204ENST00000418628 NEDD8-MDP1E9PL57 170 aa19.36■□□□□ 0.69
PTCD3-204ENST00000418628 M0QYT0 321 aa19.36■□□□□ 0.69
PTCD3-204ENST00000418628 RTN2O75298 545 aa19.36■□□□□ 0.69
PTCD3-204ENST00000418628 APOEP02649 317 aa19.36■□□□□ 0.69
PTCD3-204ENST00000418628 SLC2A3P11169 496 aa19.36■□□□□ 0.69
PTCD3-204ENST00000418628 RRM1P23921 792 aa19.36■□□□□ 0.69
PTCD3-204ENST00000418628 GBP1P32455 592 aa19.36■□□□□ 0.69
PTCD3-204ENST00000418628 SLC11A2P49281 568 aa19.36■□□□□ 0.69
PTCD3-204ENST00000418628 SULT1E1P49888 294 aa19.36■□□□□ 0.69
PTCD3-204ENST00000418628 SGSHP51688 502 aa19.36■□□□□ 0.69
PTCD3-204ENST00000418628 RNASE9P60153 205 aaKnown RBP19.36■□□□□ 0.69
PTCD3-204ENST00000418628 MAPK8IP2Q13387 824 aaPredicted RBP19.36■□□□□ 0.69
PTCD3-204ENST00000418628 TMC6Q7Z403 805 aa19.36■□□□□ 0.69
PTCD3-204ENST00000418628 DTWD2Q8NBA8 298 aa19.36■□□□□ 0.69
PTCD3-204ENST00000418628 CENPIQ92674 756 aaPredicted RBP19.36■□□□□ 0.69
PTCD3-204ENST00000418628 CFAP57Q96MR6 1250 aa19.36■□□□□ 0.69
PTCD3-204ENST00000418628 KCNH6Q9H252 994 aa19.36■□□□□ 0.69
PTCD3-204ENST00000418628 LMAN1LQ9HAT1 526 aa19.36■□□□□ 0.69
PTCD3-204ENST00000418628 RBM12Q9NTZ6 932 aaKnown RBP19.36■□□□□ 0.69
PTCD3-204ENST00000418628 ARHGEF38Q9NXL2 777 aa19.36■□□□□ 0.69
PTCD3-204ENST00000418628 ADAMTS1Q9UHI8 967 aa19.36■□□□□ 0.69
PTCD3-204ENST00000418628 CEP192Q8TEP8 1941 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 A0A087X0T9 212 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 SSU72P8A0A1W2PR75 194 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 STK25O00506 426 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 GALR2O43603 387 aaPredicted RBP19.35■□□□□ 0.69
PTCD3-204ENST00000418628 CISD3P0C7P0 127 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 FAM228BP0C875 321 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 KRT3P12035 628 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 CCR1P32246 355 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 RFC1P35251 1148 aaPredicted RBP19.35■□□□□ 0.69
PTCD3-204ENST00000418628 GRSF1Q12849 480 aaKnown RBP eCLIP19.35■□□□□ 0.69
PTCD3-204ENST00000418628 MTA1Q13330 715 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 ANO4Q32M45 955 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 CCDC14Q49A88 953 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 BRMS1LQ5PSV4 323 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 MPP7Q5T2T1 576 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 ARTNQ5T4W7 220 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 PIK3R6Q5UE93 754 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 Q6ZS52 159 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 PHLDB2Q86SQ0 1253 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 DNAAF5Q86Y56 855 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms