RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 TLR6Q9Y2C9 796 aa21.53■■□□□ 1.04
CASC3-203ENST00000418132 NEU2Q9Y3R4 380 aa21.53■■□□□ 1.04
CASC3-203ENST00000418132 GRXCR1A8MXD5 290 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 TGM5O43548 720 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 RB1P06400 928 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 ITGAVP06756 1048 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 ADH1AP07327 375 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 DNAJB1P25685 340 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 ZNF135P52742 658 aaPredicted RBP21.52■■□□□ 1.04
CASC3-203ENST00000418132 TWF1Q12792 350 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 COL13A1Q5TAT6 717 aaPredicted RBP21.52■■□□□ 1.04
CASC3-203ENST00000418132 POF1BQ8WVV4 589 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 P3H4Q92791 437 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 SLC39A13Q96H72 371 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 OSBPL2Q9H1P3 480 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 ZNF148Q9UQR1 794 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 FAM72CH0Y354 149 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 DAPK3O43293 454 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 HCAR3P49019 387 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 PTK6Q13882 451 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 PPP1R7Q15435 360 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 MAP9Q49MG5 647 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 FAM72AQ5TYM5 149 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 FAM72DQ6L9T8 149 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 NPNTQ6UXI9 565 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 SPRED2Q7Z698 418 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 FAM72BQ86X60 149 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 MRPL43Q8N983 215 aaKnown RBP21.52■■□□□ 1.04
CASC3-203ENST00000418132 IFT81Q8WYA0 676 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 HAPLN3Q96S86 360 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 EMILIN2Q9BXX0 1053 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 ENTPD7Q9NQZ7 604 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 ARHGEF4Q9NR80 690 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 FAM114A2Q9NRY5 505 aa21.52■■□□□ 1.04
CASC3-203ENST00000418132 CEP290O15078 2479 aa21.51■■□□□ 1.03
CASC3-203ENST00000418132 CCDC85CA6NKD9 419 aa21.51■■□□□ 1.03
CASC3-203ENST00000418132 KCNU1A8MYU2 1149 aa21.51■■□□□ 1.03
CASC3-203ENST00000418132 DDX42Q86XP3 938 aaKnown RBP eCLIP21.51■■□□□ 1.03
CASC3-203ENST00000418132 GSPT2Q8IYD1 628 aaKnown RBP21.51■■□□□ 1.03
CASC3-203ENST00000418132 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.51■■□□□ 1.03
CASC3-203ENST00000418132 GBF1Q92538 1859 aa21.51■■□□□ 1.03
CASC3-203ENST00000418132 CDK5RAP1Q96SZ6 601 aaKnown RBP21.51■■□□□ 1.03
CASC3-203ENST00000418132 DPH5Q9H2P9 285 aa21.51■■□□□ 1.03
CASC3-203ENST00000418132 TLR9Q9NR96 1032 aa21.51■■□□□ 1.03
CASC3-203ENST00000418132 OR12D3Q9UGF7 316 aa21.51■■□□□ 1.03
CASC3-203ENST00000418132 C2orf71A6NGG8 1288 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 EEF2KO00418 725 aaKnown RBP21.5■■□□□ 1.03
CASC3-203ENST00000418132 CREB3O43889 395 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 TLR5O60602 858 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 TBX18O95935 607 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 AMPD1P23109 780 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 EPHB3P54753 998 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 EIF3EP60228 445 aaKnown RBP21.5■■□□□ 1.03
CASC3-203ENST00000418132 EFEMP1Q12805 493 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 DPYSQ14117 519 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 C10orf120Q5SQS8 335 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 NCBP2-AS2Q69YL0 99 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 C1orf228Q6PIY5 440 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 RFX8Q6ZV50 586 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 ALLCQ8N6M5 410 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 AENQ8WTP8 325 aaKnown RBP21.5■■□□□ 1.03
CASC3-203ENST00000418132 PSMG2Q969U7 264 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 ZNF512Q96ME7 567 aaPredicted RBP21.5■■□□□ 1.03
CASC3-203ENST00000418132 TRIM31Q9BZY9 425 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 CCSER2Q9H7U1 834 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 NFU1Q9UMS0 254 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 ZNF840PA6NDX5 716 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 MCF2LO15068 1137 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 CA3P07451 260 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 SLC2A3P11169 496 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 ECHS1P30084 290 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 TBX4P57082 545 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 PLD1Q13393 1074 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 CASP8Q14790 479 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 TRIP4Q15650 581 aaPredicted RBP21.5■■□□□ 1.03
CASC3-203ENST00000418132 TAF12Q16514 161 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 PLPP4Q5VZY2 271 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 DNAJB7Q7Z6W7 309 aaPredicted RBP21.5■■□□□ 1.03
CASC3-203ENST00000418132 FCRL2Q96LA5 508 aaPredicted RBP21.5■■□□□ 1.03
CASC3-203ENST00000418132 ETNK2Q9NVF9 386 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 MARCH2Q9P0N8 246 aa21.5■■□□□ 1.03
CASC3-203ENST00000418132 HIDE1A8MVS5 230 aa21.49■■□□□ 1.03
CASC3-203ENST00000418132 SPATA31D3P0C874 917 aa21.49■■□□□ 1.03
CASC3-203ENST00000418132 RBP3P10745 1247 aa21.49■■□□□ 1.03
CASC3-203ENST00000418132 NR2C2P49116 596 aa21.49■■□□□ 1.03
CASC3-203ENST00000418132 SPATA31D4Q6ZUB0 917 aa21.49■■□□□ 1.03
CASC3-203ENST00000418132 SAMD11Q96NU1 681 aa21.49■■□□□ 1.03
CASC3-203ENST00000418132 EPAS1Q99814 870 aa21.49■■□□□ 1.03
CASC3-203ENST00000418132 TMEM121Q9BTD3 319 aa21.49■■□□□ 1.03
CASC3-203ENST00000418132 TRPM5Q9NZQ8 1165 aa21.49■■□□□ 1.03
CASC3-203ENST00000418132 SNX24Q9Y343 169 aa21.49■■□□□ 1.03
CASC3-203ENST00000418132 PCDHA11Q9Y5I1 949 aa21.49■■□□□ 1.03
CASC3-203ENST00000418132 HEY1Q9Y5J3 304 aa21.49■■□□□ 1.03
CASC3-203ENST00000418132 PAGE1O75459 146 aa21.48■■□□□ 1.03
CASC3-203ENST00000418132 KLRC2P26717 231 aa21.48■■□□□ 1.03
CASC3-203ENST00000418132 RPL21P46778 160 aaKnown RBP21.48■■□□□ 1.03
CASC3-203ENST00000418132 PPP3CCP48454 512 aa21.48■■□□□ 1.03
CASC3-203ENST00000418132 TPI1P60174 286 aa21.48■■□□□ 1.03
CASC3-203ENST00000418132 CCDC149Q6ZUS6 474 aa21.48■■□□□ 1.03
CASC3-203ENST00000418132 GSTA5Q7RTV2 222 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms