RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 UBE2QL1A1L167 161 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 LRRC14BA6NHZ5 514 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 PP2D1A8MPX8 630 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 FAM227AF5H4B4 570 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 DDX39AO00148 427 aaKnown RBP6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 CHMP2AO43633 222 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 ARIH2O95376 493 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 MBD3O95983 291 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 CCNE2O96020 404 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 TXNP10599 105 aaKnown RBP6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 CR2P20023 1033 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 UBA1P22314 1058 aaKnown RBP6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 CDC25AP30304 524 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 SYKP43405 635 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 GZMKP49863 264 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 NDUFA8P51970 172 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 HK3P52790 923 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 PRMT2P55345 433 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 SURF1Q15526 300 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 LY6KQ17RY6 165 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 KHDC1Q4VXA5 237 aaKnown RBP6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 PRAMEF19Q5SWL8 479 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 MFSD14CQ5VZR4 134 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 KRT79Q5XKE5 535 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 NCAPH2Q6IBW4 605 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 PPP4R4Q6NUP7 873 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 CCDC73Q6ZRK6 1079 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 USP49Q70CQ1 688 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 ZNF572Q7Z3I7 529 aaPredicted RBP6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 MIER3Q7Z3K6 550 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 C1QL4Q86Z23 238 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 ENGASEQ8NFI3 743 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 RDM1Q8NG50 284 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 ERMNQ8TAM6 284 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 IFI44Q8TCB0 444 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 CASKIN2Q8WXE0 1202 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 CDK5RAP3Q96JB5 506 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 SAMD11Q96NU1 681 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 LMF1Q96S06 567 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 VRK1Q99986 396 aaPredicted RBP6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 DPYSL5Q9BPU6 564 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 LRFN3Q9BTN0 628 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 MMTAG2Q9BU76 263 aaKnown RBP6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 B3GNT5Q9BYG0 378 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 PANK2Q9BZ23 570 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 CCSER1Q9C0I3 900 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 UNC45AQ9H3U1 944 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 SEC61A2Q9H9S3 476 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 PDGFCQ9NRA1 345 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 CALCOCO1Q9P1Z2 691 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 SLC9A2Q9UBY0 812 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 NRBP1Q9UHY1 535 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 OAZ3Q9UMX2 235 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 HPSEQ9Y251 543 aa6.46□□□□□ -1.38
NIFKP3-201ENST00000417799 A0A1W2PRX2 142 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 TPP1O14773 563 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 POLR2DO15514 142 aaKnown RBP6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 CDC14BO60729 498 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 SLITRK3O94933 977 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 ZNF202O95125 648 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 GGPS1O95749 300 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 ZBED1O96006 694 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 GH1P01241 217 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 RPA1P27694 616 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 PCSK1P29120 753 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 SFNP31947 248 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 CCT6AP40227 531 aaKnown RBP6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 JAK3P52333 1124 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 ACTR2P61160 394 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 TNFAIP2Q03169 654 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 SP140Q13342 867 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 MTM1Q13496 603 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 KARSQ15046 597 aaKnown RBP6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 KLHL40Q2TBA0 621 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 DUSP28Q4G0W2 176 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 ANO6Q4KMQ2 910 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 CELF3Q5SZQ8 465 aaKnown RBP6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 HYIQ5T013 277 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 HAUS3Q68CZ6 603 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 METTL7BQ6UX53 244 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 NPNTQ6UXI9 565 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 CCDC149Q6ZUS6 474 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 DAAM2Q86T65 1068 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 SMAP1Q8IYB5 467 aaPredicted RBP6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 PDILTQ8N807 584 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 RASSF8Q8NHQ8 419 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 RAET1EQ8TD07 263 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 TRIB2Q92519 343 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 CALML4Q96GE6 196 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 LRRC37BQ96QE4 947 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 HSD17B14Q9BPX1 270 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 TCF25Q9BQ70 676 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 EIF2AK1Q9BQI3 630 aaKnown RBP6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 PYM1Q9BRP8 204 aaKnown RBP6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 POLR3CQ9BUI4 534 aaPredicted RBP6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 AGO3Q9H9G7 860 aaKnown RBP6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 MLXIPQ9HAP2 919 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 MSL2Q9HCI7 577 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 DACT1Q9NYF0 836 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 MOCS1Q9NZB8 636 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms