RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 P2RY11Q96G91 374 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 SLC39A13Q96H72 371 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 RIPOR3Q96MK2 946 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 WDR24Q96S15 920 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 SNRNP25Q9BV90 132 aaKnown RBP8.39□□□□□ -1.07
MDC1-203ENST00000417033 NACA2Q9H009 215 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 ZWILCHQ9H900 591 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 KCND1Q9NSA2 647 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.39□□□□□ -1.07
MDC1-203ENST00000417033 CFAP97Q9P2B7 532 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 IP6K2Q9UHH9 426 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 DNMT3LQ9UJW3 386 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 CDH7Q9ULB5 785 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 ALG6Q9Y672 507 aa8.39□□□□□ -1.07
MDC1-203ENST00000417033 LAMA2P24043 3122 aaKnown RBP8.39□□□□□ -1.07
MDC1-203ENST00000417033 GOLGA6L7A0A1B0GV03 622 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 LEFTY2O00292 366 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 TRDMT1O14717 391 aaKnown RBP8.38□□□□□ -1.07
MDC1-203ENST00000417033 SPOPO43791 374 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 ENDOD1O94919 500 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 FGF19O95750 216 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 IL9P15248 144 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 GBP2P32456 591 aaPredicted RBP8.38□□□□□ -1.07
MDC1-203ENST00000417033 MAN1A1P33908 653 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 MTHFRP42898 656 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 SSR1P43307 286 aaKnown RBP8.38□□□□□ -1.07
MDC1-203ENST00000417033 CXCR3P49682 368 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 IRAK1P51617 712 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 VCPP55072 806 aaKnown RBP8.38□□□□□ -1.07
MDC1-203ENST00000417033 SLC7A9P82251 487 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 USP4Q13107 963 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 PIGHQ14442 188 aaPredicted RBP8.38□□□□□ -1.07
MDC1-203ENST00000417033 ZNF77Q15935 545 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 KCNT1Q5JUK3 1230 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 ZNF569Q5MCW4 686 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 ARTNQ5T4W7 220 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 NADSYN1Q6IA69 706 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 KLHDC10Q6PID8 442 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 NUDT18Q6ZVK8 323 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 STRADAQ7RTN6 431 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 ANKS1BQ7Z6G8 1248 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 SLFN11Q7Z7L1 901 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 DAAM2Q86T65 1068 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 NT5DC3Q86UY8 548 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 ZSCAN30Q86W11 494 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 ARID3BQ8IVW6 561 aaPredicted RBP8.38□□□□□ -1.07
MDC1-203ENST00000417033 ZNF276Q8N554 614 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 SH3RF2Q8TEC5 729 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 ALG3Q92685 438 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 CD101Q93033 1021 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 HLA-CQ95604 372 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 PGAP3Q96FM1 320 aaPredicted RBP8.38□□□□□ -1.07
MDC1-203ENST00000417033 ASIC4Q96FT7 647 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 ASB16Q96NS5 453 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 SERPINB11Q96P15 392 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 RPP25Q9BUL9 199 aaKnown RBP8.38□□□□□ -1.07
MDC1-203ENST00000417033 TRIM62Q9BVG3 475 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 PLA2G2FQ9BZM2 168 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 OLA1Q9NTK5 396 aaKnown RBP8.38□□□□□ -1.07
MDC1-203ENST00000417033 ARHGAP26Q9UNA1 814 aa8.38□□□□□ -1.07
MDC1-203ENST00000417033 KCNU1A8MYU2 1149 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 C2CD4DB7Z1M9 353 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 PI4K2BG5E9Z4 385 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 FAM72CH0Y354 149 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 ENC1O14682 589 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 DDX3YO15523 660 aaKnown RBP8.37□□□□□ -1.07
MDC1-203ENST00000417033 PAGE1O75459 146 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 CD48P09326 243 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 RARAP10276 462 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 DDX6P26196 483 aaKnown RBP eCLIP8.37□□□□□ -1.07
MDC1-203ENST00000417033 CORO1AP31146 461 aaKnown RBP8.37□□□□□ -1.07
MDC1-203ENST00000417033 SLC6A4P31645 630 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 AVPR1AP37288 418 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 SGSHP51688 502 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 LLGL1Q15334 1064 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 LEXMQ3ZCV2 418 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 FAM72AQ5TYM5 149 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 PIK3R6Q5UE93 754 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 DCAF12L1Q5VU92 463 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 TANGO2Q6ICL3 276 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 FAM72DQ6L9T8 149 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 AADACL2Q6P093 401 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 PARM1Q6UWI2 310 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 Q6ZNB5 142 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 C14orf80Q86SX3 495 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 FAM72BQ86X60 149 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 DENND1CQ8IV53 801 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 BBS7Q8IWZ6 715 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 TXLNBQ8N3L3 684 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 RNF10Q8N5U6 811 aaKnown RBP8.37□□□□□ -1.07
MDC1-203ENST00000417033 RSAD2Q8WXG1 361 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 HSPH1Q92598 858 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 RNF34Q969K3 372 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 C16orf45Q96MC5 204 aaPredicted RBP8.37□□□□□ -1.07
MDC1-203ENST00000417033 KCTD15Q96SI1 283 aaPredicted RBP8.37□□□□□ -1.07
MDC1-203ENST00000417033 PSMB7Q99436 277 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 KXD1Q9BQD3 176 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 HERPUD2Q9BSE4 406 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 TLR10Q9BXR5 811 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 TKTL2Q9H0I9 626 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms