RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 BECN2A8MW95 431 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 ZNF217O75362 1048 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 LETM1O95202 739 aaPredicted RBP18.62■□□□□ 0.57
CPNE1-210ENST00000416778 PON1P27169 355 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 IL12RB1P42701 662 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 ACADSBP45954 432 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 ZNF445P59923 1031 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 RING1Q06587 406 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 MEA1Q16626 185 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 PPM1JQ5JR12 505 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 RNF43Q68DV7 783 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 SLC36A4Q6YBV0 504 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 GBP6Q6ZN66 633 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 ANKS1BQ7Z6G8 1248 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 KIAA0907Q7Z7F0 614 aaPredicted RBP18.62■□□□□ 0.57
CPNE1-210ENST00000416778 METTL3Q86U44 580 aaKnown RBP18.62■□□□□ 0.57
CPNE1-210ENST00000416778 SYT12Q8IV01 421 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 UNC45BQ8IWX7 931 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 WDTC1Q8N5D0 677 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 DEFB119Q8N690 84 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 UCMAQ8WVF2 138 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 DDX1Q92499 740 aaKnown RBP18.62■□□□□ 0.57
CPNE1-210ENST00000416778 FAM81BQ96LP2 452 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 LSM14BQ9BX40 385 aaKnown RBP18.62■□□□□ 0.57
CPNE1-210ENST00000416778 SLC6A17Q9H1V8 727 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 NAALADL1Q9UQQ1 740 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 THADAQ6YHU6 1953 aa18.61■□□□□ 0.57
CPNE1-210ENST00000416778 LNP1A1A4G5 178 aa18.61■□□□□ 0.57
CPNE1-210ENST00000416778 GTPBP10A4D1E9 387 aaKnown RBP18.61■□□□□ 0.57
CPNE1-210ENST00000416778 C4orf47A7E2U8 309 aa18.61■□□□□ 0.57
CPNE1-210ENST00000416778 CDX4O14627 284 aaPredicted RBP18.61■□□□□ 0.57
CPNE1-210ENST00000416778 MED7O43513 233 aa18.61■□□□□ 0.57
CPNE1-210ENST00000416778 NCAM1P13591 858 aa18.61■□□□□ 0.57
CPNE1-210ENST00000416778 TBX4P57082 545 aa18.61■□□□□ 0.57
CPNE1-210ENST00000416778 EXOC3L4Q17RC7 722 aa18.61■□□□□ 0.57
CPNE1-210ENST00000416778 FUT11Q495W5 492 aa18.61■□□□□ 0.57
CPNE1-210ENST00000416778 PIK3R6Q5UE93 754 aa18.61■□□□□ 0.57
CPNE1-210ENST00000416778 SYPL2Q5VXT5 272 aa18.61■□□□□ 0.57
CPNE1-210ENST00000416778 BEND5Q7L4P6 421 aa18.61■□□□□ 0.57
CPNE1-210ENST00000416778 SORCS1Q8WY21 1168 aa18.61■□□□□ 0.57
CPNE1-210ENST00000416778 GOLGA1Q92805 767 aa18.61■□□□□ 0.57
CPNE1-210ENST00000416778 IRX2Q9BZI1 471 aaPredicted RBP18.61■□□□□ 0.57
CPNE1-210ENST00000416778 ST7Q9NRC1 585 aa18.61■□□□□ 0.57
CPNE1-210ENST00000416778 EVLQ9UI08 416 aaPredicted RBP18.61■□□□□ 0.57
CPNE1-210ENST00000416778 PILRBQ9UKJ0 227 aa18.61■□□□□ 0.57
CPNE1-210ENST00000416778 PAPSS1O43252 624 aaPredicted RBP18.6■□□□□ 0.57
CPNE1-210ENST00000416778 AP5Z1O43299 807 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 ACSL4O60488 711 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 ITPKAP23677 461 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 HLA-FP30511 346 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 SLC6A4P31645 630 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 SLC11A2P49281 568 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 SGSHP51688 502 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 RPL6Q02878 288 aaKnown RBP18.6■□□□□ 0.57
CPNE1-210ENST00000416778 ZNF234Q14588 700 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 EIF4HQ15056 248 aaKnown RBP18.6■□□□□ 0.57
CPNE1-210ENST00000416778 E2F5Q15329 346 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 ARHGAP44Q17R89 818 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 FAM133BQ5BKY9 247 aaKnown RBP18.6■□□□□ 0.57
CPNE1-210ENST00000416778 MPP7Q5T2T1 576 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 NUGGCQ68CJ6 796 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 SMYD5Q6GMV2 418 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 DPY19L2P1Q6NXN4 242 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 RFWD3Q6PCD5 774 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 CLEC17AQ6ZS10 378 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 ARMCX6Q7L4S7 300 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 DQX1Q8TE96 717 aaKnown RBP18.6■□□□□ 0.57
CPNE1-210ENST00000416778 SHC3Q92529 594 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 SLC39A13Q96H72 371 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 ZNF419Q96HQ0 510 aaPredicted RBP18.6■□□□□ 0.57
CPNE1-210ENST00000416778 FCRL2Q96LA5 508 aaPredicted RBP18.6■□□□□ 0.57
CPNE1-210ENST00000416778 MKRN2Q9H000 416 aaKnown RBP18.6■□□□□ 0.57
CPNE1-210ENST00000416778 THAP9Q9H5L6 903 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 SIX2Q9NPC8 291 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 ITM2CQ9NQX7 267 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 APEX2Q9UBZ4 518 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 CYP8B1Q9UNU6 501 aa18.6■□□□□ 0.57
CPNE1-210ENST00000416778 THAP12O43422 761 aa18.59■□□□□ 0.57
CPNE1-210ENST00000416778 ADRB1P08588 477 aa18.59■□□□□ 0.57
CPNE1-210ENST00000416778 ERCC5P28715 1186 aaPredicted RBP18.59■□□□□ 0.57
CPNE1-210ENST00000416778 GNA15P30679 374 aa18.59■□□□□ 0.57
CPNE1-210ENST00000416778 MTIF2P46199 727 aaKnown RBP18.59■□□□□ 0.57
CPNE1-210ENST00000416778 PEAR1Q5VY43 1037 aaPredicted RBP18.59■□□□□ 0.57
CPNE1-210ENST00000416778 LYSMD4Q5XG99 296 aa18.59■□□□□ 0.57
CPNE1-210ENST00000416778 NADSYN1Q6IA69 706 aa18.59■□□□□ 0.57
CPNE1-210ENST00000416778 ADIPOR2Q86V24 386 aa18.59■□□□□ 0.57
CPNE1-210ENST00000416778 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.59■□□□□ 0.57
CPNE1-210ENST00000416778 EDEM2Q9BV94 578 aa18.59■□□□□ 0.57
CPNE1-210ENST00000416778 CIPCQ9C0C6 399 aa18.59■□□□□ 0.57
CPNE1-210ENST00000416778 PRDM16Q9HAZ2 1276 aa18.59■□□□□ 0.57
CPNE1-210ENST00000416778 CD93Q9NPY3 652 aa18.59■□□□□ 0.57
CPNE1-210ENST00000416778 TLR6Q9Y2C9 796 aa18.59■□□□□ 0.57
CPNE1-210ENST00000416778 E5RJQ4 531 aa18.58■□□□□ 0.56
CPNE1-210ENST00000416778 FOXN3O00409 490 aaPredicted RBP18.58■□□□□ 0.56
CPNE1-210ENST00000416778 IRAK2O43187 625 aa18.58■□□□□ 0.56
CPNE1-210ENST00000416778 SART1O43290 800 aaKnown RBP18.58■□□□□ 0.56
CPNE1-210ENST00000416778 USP8P40818 1118 aa18.58■□□□□ 0.56
CPNE1-210ENST00000416778 YWHAZP63104 245 aaKnown RBP18.58■□□□□ 0.56
CPNE1-210ENST00000416778 ZNF33AQ06730 810 aa18.58■□□□□ 0.56
CPNE1-210ENST00000416778 EIF4EBP2Q13542 120 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms