RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 SPA17Q15506 151 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 IFI16Q16666 785 aaKnown RBP8.03□□□□□ -1.12
RBM39-209ENST00000416529 ASTE1Q2TB18 679 aaPredicted RBP8.03□□□□□ -1.12
RBM39-209ENST00000416529 PREPLQ4J6C6 727 aaPredicted RBP8.03□□□□□ -1.12
RBM39-209ENST00000416529 RARS2Q5T160 578 aaKnown RBP8.03□□□□□ -1.12
RBM39-209ENST00000416529 BTBD8Q5XKL5 378 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 NUGGCQ68CJ6 796 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 PMF1Q6P1K2 205 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 LLGL2Q6P1M3 1020 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 H2AFVQ71UI9 128 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 PSTKQ8IV42 348 aaKnown RBP8.03□□□□□ -1.12
RBM39-209ENST00000416529 GLYCTKQ8IVS8 523 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 ADHFE1Q8IWW8 467 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 UNC45BQ8IWX7 931 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 RHOT2Q8IXI1 618 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 MCOLN2Q8IZK6 566 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 CMTM8Q8IZV2 173 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 WDTC1Q8N5D0 677 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.03□□□□□ -1.12
RBM39-209ENST00000416529 CCDC26Q8TAB7 109 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 SMARCD2Q92925 531 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 ELSPBP1Q96BH3 223 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 KCNK16Q96T55 309 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 DDX50Q9BQ39 737 aaKnown RBP8.03□□□□□ -1.12
RBM39-209ENST00000416529 ZSWIM1Q9BR11 485 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 CORO1BQ9BR76 489 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 ATXN3LQ9H3M9 355 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 PRDM16Q9HAZ2 1276 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 ST7Q9NRC1 585 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.03□□□□□ -1.12
RBM39-209ENST00000416529 THG1LQ9NWX6 298 aaKnown RBP8.03□□□□□ -1.12
RBM39-209ENST00000416529 DONSONQ9NYP3 566 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 ADAM22Q9P0K1 906 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 ADAMTS1Q9UHI8 967 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 NAGPAQ9UK23 515 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 USP15Q9Y4E8 981 aaPredicted RBP8.03□□□□□ -1.12
RBM39-209ENST00000416529 PCDHGC5Q9Y5F6 944 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 NOTCH4Q99466 2003 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 ANAPC1Q9H1A4 1944 aa8.03□□□□□ -1.12
RBM39-209ENST00000416529 CHD7Q9P2D1 2997 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 E2F8A0AVK6 867 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 ANHXE9PGG2 379 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 CCL16O15467 120 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 EFSO43281 561 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 CCP110O43303 1012 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 TLR5O60602 858 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 DAB1O75553 588 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 RFPL2O75678 378 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 MMEP08473 750 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 LAMP2P13473 410 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 HOXB4P17483 251 aaPredicted RBP8.02□□□□□ -1.13
RBM39-209ENST00000416529 CHRNB2P17787 502 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 HDCP19113 662 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 HTR7P34969 479 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 ARHGAP25P42331 645 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 MATKP42679 507 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 YWHAGP61981 247 aaKnown RBP eCLIP8.02□□□□□ -1.13
RBM39-209ENST00000416529 GPC5P78333 572 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 PFKPQ01813 784 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 ADIGQ0VDE8 80 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 ARHGAP29Q52LW3 1261 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 BRMS1LQ5PSV4 323 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 BSPRYQ5W0U4 402 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 PLEKHA7Q6IQ23 1121 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 DENND1BQ6P3S1 775 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 WDR59Q6PJI9 974 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 TMC5Q6UXY8 1006 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 EP400NLQ6ZTU2 488 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 GAREM2Q75VX8 874 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 MON1BQ7L1V2 547 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 STRADAQ7RTN6 431 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 ZNF571Q7Z3V5 609 aaPredicted RBP8.02□□□□□ -1.13
RBM39-209ENST00000416529 GRASPQ7Z6J2 395 aaPredicted RBP8.02□□□□□ -1.13
RBM39-209ENST00000416529 TDRD5Q8NAT2 981 aaKnown RBP8.02□□□□□ -1.13
RBM39-209ENST00000416529 UBA3Q8TBC4 463 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 RNF139Q8WU17 664 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 CPLX3Q8WVH0 158 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 CTNNBL1Q8WYA6 563 aaPredicted RBP8.02□□□□□ -1.13
RBM39-209ENST00000416529 NT5C3BQ969T7 300 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 PLD4Q96BZ4 506 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 SLC2A13Q96QE2 648 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 CPXM1Q96SM3 734 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 BAG1Q99933 345 aaPredicted RBP8.02□□□□□ -1.13
RBM39-209ENST00000416529 NHEJ1Q9H9Q4 299 aaPredicted RBP8.02□□□□□ -1.13
RBM39-209ENST00000416529 ZFP14Q9HCL3 533 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 ARHGAP20Q9P2F6 1191 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 SLC12A6Q9UHW9 1150 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 LSM7Q9UK45 103 aaKnown RBP8.02□□□□□ -1.13
RBM39-209ENST00000416529 AJAP1Q9UKB5 411 aaPredicted RBP8.02□□□□□ -1.13
RBM39-209ENST00000416529 NENFQ9UMX5 172 aa8.02□□□□□ -1.13
RBM39-209ENST00000416529 NUP210Q8TEM1 1887 aaPredicted RBP8.02□□□□□ -1.13
RBM39-209ENST00000416529 C2orf16Q68DN1 1984 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 CXorf51AA0A1B0GTR3 108 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 LOC730098B7Z3J9 87 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 E5RJQ4 531 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 DDX3XO00571 662 aaKnown RBP eCLIP8.01□□□□□ -1.13
RBM39-209ENST00000416529 CAPN9O14815 690 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 LINC01565O15544 149 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 IRAK2O43187 625 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 PAPSS1O43252 624 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms