RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 POU5F2Q8N7G0 328 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 RNF169Q8NCN4 708 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 GSTCDQ8NEC7 633 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 GSDMBQ8TAX9 411 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 CLMNQ96JQ2 1002 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 FCRL3Q96P31 734 aaPredicted RBP10.19□□□□□ -0.78
SS18-203ENST00000415083 QKIQ96PU8 341 aaKnown RBP eCLIP10.19□□□□□ -0.781e-6■■■■■ 30.7
SS18-203ENST00000415083 CSPG4P5Q96PW8 444 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 CYP3A43Q9HB55 503 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 TUBGCP4Q9UGJ1 667 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 E2F8A0AVK6 867 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 IRF6O14896 467 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 SPAG6O75602 509 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 GOT1P17174 413 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 GTF2A2P52657 109 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 ARHGAP1Q07960 439 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 SEMA5AQ13591 1074 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 CCNIQ14094 377 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 KRT81Q14533 505 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 PDK2Q15119 407 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 C11orf91Q3C1V1 193 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 NAPRTQ6XQN6 538 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 DENND5BQ6ZUT9 1274 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 MOB2Q70IA6 237 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 IFNLR1Q8IU57 520 aaPredicted RBP10.19□□□□□ -0.78
SS18-203ENST00000415083 TMPRSS6Q8IU80 811 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 NUDCD3Q8IVD9 361 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 PLD6Q8N2A8 252 aaKnown RBP10.19□□□□□ -0.78
SS18-203ENST00000415083 CFAP61Q8NHU2 1237 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 C18orf25Q96B23 403 aaPredicted RBP10.19□□□□□ -0.78
SS18-203ENST00000415083 FAM167AQ96KS9 214 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 ZNF670Q9BS34 389 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 MIS12Q9H081 205 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 DPP3Q9NY33 737 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 STOML1Q9UBI4 398 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 FNDC1Q4ZHG4 1894 aaPredicted RBP10.18□□□□□ -0.78
SS18-203ENST00000415083 TPP1O14773 563 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 LUC7L3O95232 432 aaKnown RBP10.18□□□□□ -0.78
SS18-203ENST00000415083 ZBED1O96006 694 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 MCF2P10911 925 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 TPSB2P20231 275 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 LMO2P25791 158 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 ATICP31939 592 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 ZBTB16Q05516 673 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 BTKQ06187 659 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 KLC1Q07866 573 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 TPSAB1Q15661 275 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 MUM1Q2TAK8 710 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 FASTKD1Q53R41 847 aaKnown RBP10.18□□□□□ -0.78
SS18-203ENST00000415083 IRGCQ6NXR0 463 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 CES3Q6UWW8 571 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 SCUBE1Q8IWY4 988 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 KBTBD7Q8WVZ9 684 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 THTPAQ9BU02 230 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 CDHR5Q9HBB8 845 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 TAGLN3Q9UI15 199 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 ADAMTS6Q9UKP5 1117 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 TBC1D30Q9Y2I9 924 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 SPTLC1O15269 473 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 GAS2O43903 313 aaKnown RBP10.18□□□□□ -0.78
SS18-203ENST00000415083 RNASEH1O60930 286 aaKnown RBP10.18□□□□□ -0.78
SS18-203ENST00000415083 LMNAP02545 664 aaKnown RBP10.18□□□□□ -0.78
SS18-203ENST00000415083 AOC1P19801 751 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 HOXA11P31270 313 aaPredicted RBP10.18□□□□□ -0.78
SS18-203ENST00000415083 GRIA2P42262 883 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 RPL34P49207 117 aaKnown RBP10.18□□□□□ -0.78
SS18-203ENST00000415083 TFDP2Q14188 446 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 PGM2L1Q6PCE3 622 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 VPS52Q8N1B4 723 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 AZIN2Q96A70 460 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 ACSS2Q9NR19 701 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 TMEM216Q9P0N5 145 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 LRCH1Q9Y2L9 728 aa10.18□□□□□ -0.78
SS18-203ENST00000415083 MFSD11O43934 449 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 ZBTB7AO95365 584 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 STAU1O95793 577 aaKnown RBP10.17□□□□□ -0.78
SS18-203ENST00000415083 SERPINA6P08185 405 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 CCDC130P13994 396 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 BIRC2Q13490 618 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 TMEM132DQ14C87 1099 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 STILQ15468 1287 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 ZBTB6Q15916 424 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 FAM219BQ5XKK7 198 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 PACS1Q6VY07 963 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 NET1Q7Z628 596 aaPredicted RBP10.17□□□□□ -0.78
SS18-203ENST00000415083 C10orf107Q8IVU9 208 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 PHTF2Q8N3S3 785 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 MAPK15Q8TD08 544 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 TFB1MQ8WVM0 346 aaKnown RBP10.17□□□□□ -0.78
SS18-203ENST00000415083 TUBGCP5Q96RT8 1024 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 APOL6Q9BWW8 343 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 XAB2Q9HCS7 855 aaKnown RBP10.17□□□□□ -0.78
SS18-203ENST00000415083 XPNPEP3Q9NQH7 507 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 HES2Q9Y543 173 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 SHROOM3Q8TF72 1996 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 F8W8V4 182 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 ZBTB14O43829 449 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 PLIN3O60664 434 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 KRT37O76014 449 aa10.17□□□□□ -0.78
SS18-203ENST00000415083 PROCP04070 461 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms