RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 NCOA4Q13772 614 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 BMT2Q1RMZ1 405 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 INAVAQ3KP66 663 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 FOXD4L5Q5VV16 416 aaPredicted RBP10.03□□□□□ -0.8
RFFL-203ENST00000413582 SCD5Q86SK9 330 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 CRYBG2Q8N1P7 616 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 C12orf29Q8N999 325 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 ZNF507Q8TCN5 953 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 FOXD4L4Q8WXT5 416 aaPredicted RBP10.03□□□□□ -0.8
RFFL-203ENST00000413582 JAKMIP2Q96AA8 810 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 BIRC7Q96CA5 298 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 FCRL3Q96P31 734 aaPredicted RBP10.03□□□□□ -0.8
RFFL-203ENST00000413582 PANK2Q9BZ23 570 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 CIPCQ9C0C6 399 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 TNMDQ9H2S6 317 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 PCDHGA1Q9Y5H4 931 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 PCDHA5Q9Y5H7 936 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 A0A1B0GTQ1 180 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 LRRIQ3A6PVS8 624 aaPredicted RBP10.02□□□□□ -0.81
RFFL-203ENST00000413582 CYSRT1A8MQ03 144 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 TSPAN3O60637 253 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 CLSTN1O94985 981 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 CD27P26842 260 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 CORO1AP31146 461 aaKnown RBP10.02□□□□□ -0.81
RFFL-203ENST00000413582 HNF1BP35680 557 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 CHKAP35790 457 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 ASPAP45381 313 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 KIF11P52732 1056 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 SNRPFP62306 86 aaKnown RBP10.02□□□□□ -0.81
RFFL-203ENST00000413582 CLDN10P78369 228 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 SEMG2Q02383 582 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 E2F5Q15329 346 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 E2F4Q16254 413 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 FAM26FQ5R3K3 315 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 C6orf118Q5T5N4 469 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 CCDC186Q7Z3E2 898 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 UNC93AQ86WB7 457 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 NELFCDQ8IXH7 590 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 C12orf56Q8IXR9 622 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 ZNF276Q8N554 614 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 PDILTQ8N807 584 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 SNIP1Q8TAD8 396 aaKnown RBP10.02□□□□□ -0.81
RFFL-203ENST00000413582 ZNF396Q96N95 335 aaPredicted RBP10.02□□□□□ -0.81
RFFL-203ENST00000413582 TWNKQ96RR1 684 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 USP28Q96RU2 1077 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 TMEM245Q9H330 911 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 PNPLA8Q9NP80 782 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 KBTBD4Q9NVX7 518 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 RASAL2Q9UJF2 1139 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 NAGPAQ9UK23 515 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 CFAP45Q9UL16 551 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 AGO1Q9UL18 857 aaKnown RBP10.02□□□□□ -0.81
RFFL-203ENST00000413582 ZNF510Q9Y2H8 683 aa10.02□□□□□ -0.81
RFFL-203ENST00000413582 MORC2Q9Y6X9 1032 aaPredicted RBP10.02□□□□□ -0.81
RFFL-203ENST00000413582 GOLGA6L22H0YM25 854 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 CBX4O00257 560 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 ENC1O14682 589 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 RFPL3O75679 317 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 FSBPO95073 299 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 C4BPAP04003 597 aaKnown RBP10.01□□□□□ -0.81
RFFL-203ENST00000413582 IGHV4-34P06331 123 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 HMBSP08397 361 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 ACADVLP49748 655 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 PSEN1P49768 467 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 ASIC1P78348 528 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 KRT85P78386 507 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 CEBPZQ03701 1054 aaKnown RBP10.01□□□□□ -0.81
RFFL-203ENST00000413582 EHHADHQ08426 723 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 DNAJC3Q13217 504 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 RTP5Q14D33 572 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 HES3Q5TGS1 186 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 PCSK4Q6UW60 755 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 LRRC69Q6ZNQ3 347 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 ZNF605Q86T29 641 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 TADA2BQ86TJ2 420 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 GATAD2AQ86YP4 633 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 FAM217AQ8IXS0 508 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 CPXM2Q8N436 756 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 ZNF366Q8N895 744 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 PARD3BQ8TEW8 1205 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 HNRNPABQ99729 332 aaKnown RBP10.01□□□□□ -0.81
RFFL-203ENST00000413582 SLC2A11Q9BYW1 496 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 DCLK3Q9C098 648 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 SCAND2PQ9GZW5 306 aaPredicted RBP10.01□□□□□ -0.81
RFFL-203ENST00000413582 BTBD1Q9H0C5 482 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 CLIC5Q9NZA1 410 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 PTPN13Q12923 2485 aa10.01□□□□□ -0.81
RFFL-203ENST00000413582 NYNRINQ9P2P1 1898 aaKnown RBP10□□□□□ -0.81
RFFL-203ENST00000413582 TEX51A0A1B0GUA7 166 aa10□□□□□ -0.81
RFFL-203ENST00000413582 VILLO15195 856 aa10□□□□□ -0.81
RFFL-203ENST00000413582 RRP8O43159 456 aaKnown RBP10□□□□□ -0.81
RFFL-203ENST00000413582 TIMM44O43615 452 aa10□□□□□ -0.81
RFFL-203ENST00000413582 DFNA5O60443 496 aa10□□□□□ -0.81
RFFL-203ENST00000413582 EXOC3O60645 756 aa10□□□□□ -0.81
RFFL-203ENST00000413582 CYBBP04839 570 aa10□□□□□ -0.81
RFFL-203ENST00000413582 RALAP11233 206 aa10□□□□□ -0.81
RFFL-203ENST00000413582 P4HA1P13674 534 aa10□□□□□ -0.81
RFFL-203ENST00000413582 JUPP14923 745 aa10□□□□□ -0.81
RFFL-203ENST00000413582 HOXD9P28356 352 aaPredicted RBP10□□□□□ -0.81
RFFL-203ENST00000413582 HLA-FP30511 346 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms