RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 FHOD1Q9Y613 1164 aa16.34■□□□□ 0.21
MCF2L-211ENST00000413354 WDR87Q6ZQQ6 2873 aa16.33■□□□□ 0.21
MCF2L-211ENST00000413354 CKAP5Q14008 2032 aa16.33■□□□□ 0.21
MCF2L-211ENST00000413354 ACSL4O60488 711 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 APOEP02649 317 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 FYNP06241 537 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 UCHL3P15374 230 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 HOXD9P28356 352 aaPredicted RBP16.33■□□□□ 0.2
MCF2L-211ENST00000413354 GBP1P32455 592 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 CLCN1P35523 988 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 ID4P47928 161 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 YWHAZP63104 245 aaKnown RBP16.33■□□□□ 0.2
MCF2L-211ENST00000413354 SPEM2Q0P670 501 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 KCNMA1Q12791 1236 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 KRT31Q15323 416 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 PLK5Q496M5 336 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 EFHC1Q5JVL4 640 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 DPY19L2P1Q6NXN4 242 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 C11orf57Q6ZUT1 292 aaPredicted RBP16.33■□□□□ 0.2
MCF2L-211ENST00000413354 SLC47A2Q86VL8 602 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 PASD1Q8IV76 773 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 C1orf131Q8NDD1 294 aaKnown RBP16.33■□□□□ 0.2
MCF2L-211ENST00000413354 WFIKKN2Q8TEU8 576 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 HMGB4Q8WW32 186 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 TMA16Q96EY4 203 aaKnown RBP16.33■□□□□ 0.2
MCF2L-211ENST00000413354 GABRG3Q99928 467 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 PDCL3Q9H2J4 239 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 SYNCQ9H7C4 482 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 ZDHHC4Q9NPG8 344 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 NAALADL1Q9UQQ1 740 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 CEP192Q8TEP8 1941 aa16.33■□□□□ 0.2
MCF2L-211ENST00000413354 HSF2BPO75031 334 aa16.32■□□□□ 0.2
MCF2L-211ENST00000413354 STARD3Q14849 445 aa16.32■□□□□ 0.2
MCF2L-211ENST00000413354 CSRP2Q16527 193 aa16.32■□□□□ 0.2
MCF2L-211ENST00000413354 MPP7Q5T2T1 576 aa16.32■□□□□ 0.2
MCF2L-211ENST00000413354 TAC4Q86UU9 113 aa16.32■□□□□ 0.2
MCF2L-211ENST00000413354 PGBD3Q8N328 593 aa16.32■□□□□ 0.2
MCF2L-211ENST00000413354 HJURPQ8NCD3 748 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-211ENST00000413354 TMEM35BQ8NCS4 154 aa16.32■□□□□ 0.2
MCF2L-211ENST00000413354 OLIG1Q8TAK6 271 aa16.32■□□□□ 0.2
MCF2L-211ENST00000413354 PIWIL1Q96J94 861 aaKnown RBP16.32■□□□□ 0.2
MCF2L-211ENST00000413354 FCRL2Q96LA5 508 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-211ENST00000413354 CPXM1Q96SM3 734 aa16.32■□□□□ 0.2
MCF2L-211ENST00000413354 NAA15Q9BXJ9 866 aaKnown RBP16.32■□□□□ 0.2
MCF2L-211ENST00000413354 STK33Q9BYT3 514 aa16.32■□□□□ 0.2
MCF2L-211ENST00000413354 NAT10Q9H0A0 1025 aaKnown RBP16.32■□□□□ 0.2
MCF2L-211ENST00000413354 VPS16Q9H269 839 aa16.32■□□□□ 0.2
MCF2L-211ENST00000413354 PARD6AQ9NPB6 346 aa16.32■□□□□ 0.2
MCF2L-211ENST00000413354 SEMA4GQ9NTN9 838 aa16.32■□□□□ 0.2
MCF2L-211ENST00000413354 FANCLQ9NW38 375 aa16.32■□□□□ 0.2
MCF2L-211ENST00000413354 HCN2Q9UL51 889 aa16.32■□□□□ 0.2
MCF2L-211ENST00000413354 FRYLO94915 3013 aa16.31■□□□□ 0.2
MCF2L-211ENST00000413354 F8VZ95 297 aa16.31■□□□□ 0.2
MCF2L-211ENST00000413354 TIMM44O43615 452 aa16.31■□□□□ 0.2
MCF2L-211ENST00000413354 TSPAN3O60637 253 aa16.31■□□□□ 0.2
MCF2L-211ENST00000413354 PNMA6AP0CW24 399 aaPredicted RBP16.31■□□□□ 0.2
MCF2L-211ENST00000413354 TGM1P22735 817 aa16.31■□□□□ 0.2
MCF2L-211ENST00000413354 CDK17Q00537 523 aa16.31■□□□□ 0.2
MCF2L-211ENST00000413354 ARID5AQ03989 594 aa16.31■□□□□ 0.2
MCF2L-211ENST00000413354 GEN1Q17RS7 908 aa16.31■□□□□ 0.2
MCF2L-211ENST00000413354 PMS2CLQ68D20 193 aa16.31■□□□□ 0.2
MCF2L-211ENST00000413354 ZDHHC17Q8IUH5 632 aa16.31■□□□□ 0.2
MCF2L-211ENST00000413354 MSANTD4Q8NCY6 345 aa16.31■□□□□ 0.2
MCF2L-211ENST00000413354 P2RY11Q96G91 374 aa16.31■□□□□ 0.2
MCF2L-211ENST00000413354 SLC39A13Q96H72 371 aa16.31■□□□□ 0.2
MCF2L-211ENST00000413354 DUSP15Q9H1R2 295 aaPredicted RBP16.31■□□□□ 0.2
MCF2L-211ENST00000413354 CACNA2D2Q9NY47 1150 aa16.31■□□□□ 0.2
MCF2L-211ENST00000413354 THAP10Q9P2Z0 257 aaPredicted RBP16.31■□□□□ 0.2
MCF2L-211ENST00000413354 A0A1W2PQF6 199 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 DCLK1O15075 740 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 LSM8O95777 96 aaKnown RBP16.3■□□□□ 0.2
MCF2L-211ENST00000413354 TRUB2O95900 331 aaKnown RBP16.3■□□□□ 0.2
MCF2L-211ENST00000413354 SLC2A3P11169 496 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 CYP11B1P15538 503 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 CDK11BP21127 795 aaKnown RBP16.3■□□□□ 0.2
MCF2L-211ENST00000413354 CDH5P33151 784 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-211ENST00000413354 P2RY2P41231 377 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 WASP42768 502 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 COPB1P53618 953 aaKnown RBP16.3■□□□□ 0.2
MCF2L-211ENST00000413354 TYRO3Q06418 890 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 MTA1Q13330 715 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 PTPN20Q4JDL3 420 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 DCAF6Q58WW2 860 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 FAM133BQ5BKY9 247 aaKnown RBP16.3■□□□□ 0.2
MCF2L-211ENST00000413354 PIK3R6Q5UE93 754 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 SYPL2Q5VXT5 272 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 OR6B2Q6IFH4 312 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 PRR23CQ6ZRP0 262 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 FAM183BPQ6ZVS7 135 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 CCDC117Q8IWD4 279 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-211ENST00000413354 AHI1Q8N157 1196 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 WDTC1Q8N5D0 677 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.3■□□□□ 0.2
MCF2L-211ENST00000413354 ADAM32Q8TC27 787 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 SLC2A13Q96QE2 648 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 ACOX2Q99424 681 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 CIPCQ9C0C6 399 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 GANQ9H2C0 597 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 ARRDC1-AS1Q9H2J1 176 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 FAM204AQ9H8W3 233 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms