RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 GPBP1Q86WP2 473 aa5.69□□□□□ -1.5
LINC00342-201ENST00000412393 CEP57Q86XR8 500 aa5.69□□□□□ -1.5
LINC00342-201ENST00000412393 PALB2Q86YC2 1186 aa5.69□□□□□ -1.5
LINC00342-201ENST00000412393 REXO1L1PQ8IX06 675 aa5.69□□□□□ -1.5
LINC00342-201ENST00000412393 TDRD5Q8NAT2 981 aaKnown RBP5.69□□□□□ -1.5
LINC00342-201ENST00000412393 RASSF8Q8NHQ8 419 aa5.69□□□□□ -1.5
LINC00342-201ENST00000412393 HASPINQ8TF76 798 aa5.69□□□□□ -1.5
LINC00342-201ENST00000412393 SECISBP2LQ93073 1101 aaKnown RBP5.69□□□□□ -1.5
LINC00342-201ENST00000412393 SLC6A18Q96N87 628 aa5.69□□□□□ -1.5
LINC00342-201ENST00000412393 PTCHD1Q96NR3 888 aa5.69□□□□□ -1.5
LINC00342-201ENST00000412393 NTPCRQ9BSD7 190 aaKnown RBP5.69□□□□□ -1.5
LINC00342-201ENST00000412393 KLC2Q9H0B6 622 aa5.69□□□□□ -1.5
LINC00342-201ENST00000412393 PTPRHQ9HD43 1115 aa5.69□□□□□ -1.5
LINC00342-201ENST00000412393 MAN1C1Q9NR34 630 aa5.69□□□□□ -1.5
LINC00342-201ENST00000412393 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.69□□□□□ -1.5
LINC00342-201ENST00000412393 TOPORSQ9NS56 1045 aaPredicted RBP5.69□□□□□ -1.5
LINC00342-201ENST00000412393 KCND2Q9NZV8 630 aa5.69□□□□□ -1.5
LINC00342-201ENST00000412393 FNIP2Q9P278 1114 aa5.69□□□□□ -1.5
LINC00342-201ENST00000412393 DPP7Q9UHL4 492 aa5.69□□□□□ -1.5
LINC00342-201ENST00000412393 KCNG1Q9UIX4 513 aa5.69□□□□□ -1.5
LINC00342-201ENST00000412393 ST6GALNAC2Q9UJ37 374 aa5.69□□□□□ -1.5
LINC00342-201ENST00000412393 NOTCH4Q99466 2003 aa5.69□□□□□ -1.5
LINC00342-201ENST00000412393 NPHP3-ACAD11A0A0J9YXS1 232 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 SMIM28A0A1B0GU29 152 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 CCDC195A0A1B0GUA6 201 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 TMEM221A6NGB7 291 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 C9orf118A6NHY6 69 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 TMEM189-UBE2V1I3L0A0 370 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 M0R296 226 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 ARHGAP6O43182 974 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 CBFA2T2O43439 604 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 LAMTOR5O43504 91 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 TGM5O43548 720 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 STX10O60499 249 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 KINO60870 393 aaKnown RBP5.68□□□□□ -1.5
LINC00342-201ENST00000412393 RFPL2O75678 378 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 B3GAT3O94766 335 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 C1RP00736 705 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 KRT18P05783 430 aaKnown RBP5.68□□□□□ -1.5
LINC00342-201ENST00000412393 SPATA31D3P0C874 917 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 MCF2P10911 925 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 NME1P15531 152 aaKnown RBP5.68□□□□□ -1.5
LINC00342-201ENST00000412393 RPL17P18621 184 aaKnown RBP5.68□□□□□ -1.5
LINC00342-201ENST00000412393 PROZP22891 400 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 MARCKSP29966 332 aaPredicted RBP5.68□□□□□ -1.5
LINC00342-201ENST00000412393 ACTN2P35609 894 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 MATR3P43243 847 aaKnown RBP eCLIP5.68□□□□□ -1.5
LINC00342-201ENST00000412393 MAGEA9P43362 315 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 CLCNKBP51801 687 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 GRIN1Q05586 938 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 TBX2Q13207 712 aaPredicted RBP5.68□□□□□ -1.5
LINC00342-201ENST00000412393 KARSQ15046 597 aaKnown RBP5.68□□□□□ -1.5
LINC00342-201ENST00000412393 PTPAQ15257 358 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 PSMD5Q16401 504 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 CAMK4Q16566 473 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 ZSCAN26Q16670 478 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 ARHGAP29Q52LW3 1261 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 ANKRD39Q53RE8 183 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 XKR4Q5GH76 650 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 ARMCX5Q6P1M9 558 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 CC2D1AQ6P1N0 951 aaPredicted RBP5.68□□□□□ -1.5
LINC00342-201ENST00000412393 PDXDC1Q6P996 788 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 DCLRE1AQ6PJP8 1040 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 CYP26C1Q6V0L0 522 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 C15orf39Q6ZRI6 1047 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 CCDC73Q6ZRK6 1079 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 SPATA31D4Q6ZUB0 917 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 CCDC149Q6ZUS6 474 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 OTOP3Q7RTS5 596 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 HAUS6Q7Z4H7 955 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 BMP8AQ7Z5Y6 402 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 SUGP1Q8IWZ8 645 aaKnown RBP5.68□□□□□ -1.5
LINC00342-201ENST00000412393 KREMEN2Q8NCW0 462 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 MSANTD4Q8NCY6 345 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 TMEM161BQ8NDZ6 487 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 CMASQ8NFW8 434 aaPredicted RBP5.68□□□□□ -1.5
LINC00342-201ENST00000412393 FBXO27Q8NI29 283 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 HDAC7Q8WUI4 952 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 RAD54LQ92698 747 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 FAM122AQ96E09 287 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 ZBTB45Q96K62 511 aaPredicted RBP5.68□□□□□ -1.5
LINC00342-201ENST00000412393 SNX27Q96L92 541 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 UROC1Q96N76 676 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 ACAP3Q96P50 834 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 NOX5Q96PH1 765 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 PPP1R10Q96QC0 940 aaKnown RBP5.68□□□□□ -1.5
LINC00342-201ENST00000412393 REEP2Q9BRK0 252 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 TACO1Q9BSH4 297 aaKnown RBP5.68□□□□□ -1.5
LINC00342-201ENST00000412393 TTPALQ9BTX7 342 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 CCSER1Q9C0I3 900 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 ZHX3Q9H4I2 956 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 PLEKHA4Q9H4M7 779 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 VIPAS39Q9H9C1 493 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 ARFGAP3Q9NP61 516 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 BLOC1S4Q9NUP1 217 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 SLC38A7Q9NVC3 462 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 LARSQ9P2J5 1176 aaKnown RBP5.68□□□□□ -1.5
LINC00342-201ENST00000412393 ANKFY1Q9P2R3 1169 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 ADAM21Q9UKJ8 722 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 ODF2LQ9ULJ1 636 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms