RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 CSPG4P5Q96PW8 444 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 EMILIN2Q9BXX0 1053 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 TKTL2Q9H0I9 626 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 ENTPD7Q9NQZ7 604 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 SFMBT1Q9UHJ3 866 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 DNPEPQ9ULA0 475 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 DRG1Q9Y295 367 aaKnown RBP12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 SHROOM3Q8TF72 1996 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 DOCK4Q8N1I0 1966 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 LAMA2P24043 3122 aaKnown RBP12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 LCHNA4D1U4 455 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 LINC01553A4QN01 128 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 BHMG1C9JSJ3 638 aaPredicted RBP12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 H7C0C1 242 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 SGK1O00141 431 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 NDC80O14777 642 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 TEX28O15482 410 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 SEC31AO94979 1220 aaKnown RBP12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 CXCL14O95715 111 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 KRT14P02533 472 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 APOEP02649 317 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 ITGAVP06756 1048 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 SLC2A3P11169 496 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 PECAM1P16284 738 aaPredicted RBP12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 GOT1P17174 413 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 IL4RP24394 825 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 ATP5OP48047 213 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 CARSP49589 748 aaKnown RBP12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 EPHB3P54753 998 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 DRG2P55039 364 aaKnown RBP12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 TBX4P57082 545 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 UBE3AQ05086 875 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 EFEMP1Q12805 493 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 CALCOCO2Q13137 446 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 NNTQ13423 1086 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 PPP2R5DQ14738 602 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 C10orf120Q5SQS8 335 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 RASIP1Q5U651 963 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 DUPD1Q68J44 220 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 EMBQ6PCB8 327 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 CCDC149Q6ZUS6 474 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 BZW1Q7L1Q6 419 aaKnown RBP12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 MTERF4Q7Z6M4 381 aaKnown RBP12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 ITIH5Q86UX2 942 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 TCEAL8Q8IYN2 117 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 CCDC89Q8N998 374 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 BBOF1Q8ND07 529 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 SLC35B2Q8TB61 432 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 RSAD2Q8WXG1 361 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 SEC14L1Q92503 715 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 ZNF512Q96ME7 567 aaPredicted RBP12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 TCF25Q9BQ70 676 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 FAM129AQ9BZQ8 928 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 OSER1Q9NX31 292 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 ARHGEF38Q9NXL2 777 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 CWC15Q9P013 229 aaKnown RBP12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 UXTQ9UBK9 157 aaPredicted RBP12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 NFU1Q9UMS0 254 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 TLR6Q9Y2C9 796 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 INSL5Q9Y5Q6 135 aa12.03□□□□□ -0.48
SNRNP35-202ENST00000412157 HELZP42694 1942 aaKnown RBP12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 CFAP69A5D8W1 941 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 MSI1O43347 362 aaKnown RBP12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 LILRB3O75022 631 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 CNPP09543 421 aaKnown RBP12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 ZDHHC11BP0C7U3 371 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 MYBL2P10244 700 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 RBP3P10745 1247 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 AMPD1P23109 780 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 NR2C2P49116 596 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 TWF1Q12792 350 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 OASLQ15646 514 aaKnown RBP12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 TRIP4Q15650 581 aaPredicted RBP12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 BEND6Q5SZJ8 279 aaPredicted RBP12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 PLPP4Q5VZY2 271 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 DARS2Q6PI48 645 aaKnown RBP12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 NPNTQ6UXI9 565 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 RFX8Q6ZV50 586 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 PDZD4Q76G19 769 aaPredicted RBP12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 DDX42Q86XP3 938 aaKnown RBP eCLIP12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 CDKL3Q8IVW4 592 aaPredicted RBP12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 ALLCQ8N6M5 410 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 PQLC3Q8N755 202 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 PLD5Q8N7P1 536 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 ATP6V0D2Q8N8Y2 350 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 AENQ8WTP8 325 aaKnown RBP12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 TRMT2BQ96GJ1 504 aaKnown RBP12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 SNF8Q96H20 258 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 SAMD11Q96NU1 681 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 HAPLN3Q96S86 360 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 NACA2Q9H009 215 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 OSBPL2Q9H1P3 480 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 TLR9Q9NR96 1032 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 TMPRSS4Q9NRS4 437 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 TRPM5Q9NZQ8 1165 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 MARCH2Q9P0N8 246 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 MTRF1LQ9UGC7 380 aaKnown RBP12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 SLC12A6Q9UHW9 1150 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 NUDT5Q9UKK9 219 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms