RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 ZNF534Q76KX8 674 aa25.36■■□□□ 1.65
VRK2-202ENST00000412104 ANKS4BQ8N8V4 417 aa25.36■■□□□ 1.65
VRK2-202ENST00000412104 RSPH1Q8WYR4 309 aa25.36■■□□□ 1.65
VRK2-202ENST00000412104 PGAP3Q96FM1 320 aaPredicted RBP25.36■■□□□ 1.65
VRK2-202ENST00000412104 PKMYT1Q99640 499 aa25.36■■□□□ 1.65
VRK2-202ENST00000412104 ANLNQ9NQW6 1124 aa25.36■■□□□ 1.65
VRK2-202ENST00000412104 TMLHEQ9NVH6 421 aa25.36■■□□□ 1.65
VRK2-202ENST00000412104 SQORQ9Y6N5 450 aa25.36■■□□□ 1.65
VRK2-202ENST00000412104 COL4A4P53420 1690 aaPredicted RBP25.35■■□□□ 1.65
VRK2-202ENST00000412104 GOLGA6L7A0A1B0GV03 622 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 ASMTLO95671 621 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 ITGB1P05556 798 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 BDNFP23560 247 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 IL9RQ01113 521 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 SF3A3Q12874 501 aaKnown RBP eCLIP25.35■■□□□ 1.65
VRK2-202ENST00000412104 SEMA5AQ13591 1074 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 ITIH4Q14624 930 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 PRKD1Q15139 912 aaPredicted RBP25.35■■□□□ 1.65
VRK2-202ENST00000412104 KBTBD12Q3ZCT8 623 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 NETO2Q8NC67 525 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 SMC1BQ8NDV3 1235 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 OR10T2Q8NGX3 314 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 PNPLA8Q9NP80 782 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 SRRDQ9UH36 339 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 NLRC5Q86WI3 1866 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 A0A0A0MRY4 1105 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 I6L893 689 aaPredicted RBP25.35■■□□□ 1.65
VRK2-202ENST00000412104 TYROBPO43914 113 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 YY1P25490 414 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 MAGEA3P43357 314 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 LIG3P49916 1009 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 PAFAH1B3Q15102 231 aaKnown RBP25.35■■□□□ 1.65
VRK2-202ENST00000412104 ANKRD20A2Q5SQ80 823 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 ANKRD20A1Q5TYW2 823 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 ANKRD20A3Q5VUR7 823 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 DENND5BQ6ZUT9 1274 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 SPATA13Q96N96 652 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 TMEM209Q96SK2 561 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 SSU72Q9NP77 194 aaKnown RBP25.35■■□□□ 1.65
VRK2-202ENST00000412104 DDIT4Q9NX09 232 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 ZC3H7BQ9UGR2 993 aaKnown RBP25.35■■□□□ 1.65
VRK2-202ENST00000412104 TTLL3Q9Y4R7 772 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 PTPRDP23468 1912 aa25.35■■□□□ 1.65
VRK2-202ENST00000412104 FAM72CH0Y354 149 aa25.34■■□□□ 1.65
VRK2-202ENST00000412104 SNX3O60493 162 aa25.34■■□□□ 1.65
VRK2-202ENST00000412104 AMHP03971 560 aa25.34■■□□□ 1.65
VRK2-202ENST00000412104 KRT4P19013 534 aa25.34■■□□□ 1.65
VRK2-202ENST00000412104 CA4P22748 312 aa25.34■■□□□ 1.65
VRK2-202ENST00000412104 RPA3P35244 121 aaPredicted RBP25.34■■□□□ 1.65
VRK2-202ENST00000412104 SEMA3BQ13214 749 aa25.34■■□□□ 1.65
VRK2-202ENST00000412104 FAM72AQ5TYM5 149 aa25.34■■□□□ 1.65
VRK2-202ENST00000412104 OVOS1Q6IE37 1185 aa25.34■■□□□ 1.65
VRK2-202ENST00000412104 FAM72DQ6L9T8 149 aa25.34■■□□□ 1.65
VRK2-202ENST00000412104 FAM72BQ86X60 149 aa25.34■■□□□ 1.65
VRK2-202ENST00000412104 SLC44A1Q8WWI5 657 aa25.34■■□□□ 1.65
VRK2-202ENST00000412104 EDEM1Q92611 657 aa25.34■■□□□ 1.65
VRK2-202ENST00000412104 LRRC39Q96DD0 335 aa25.34■■□□□ 1.65
VRK2-202ENST00000412104 PAIP2Q9BPZ3 127 aaKnown RBP25.34■■□□□ 1.65
VRK2-202ENST00000412104 DMAP1Q9NPF5 467 aaPredicted RBP25.34■■□□□ 1.65
VRK2-202ENST00000412104 RRN3Q9NYV6 651 aa25.34■■□□□ 1.65
VRK2-202ENST00000412104 FBXW11Q9UKB1 542 aa25.34■■□□□ 1.65
VRK2-202ENST00000412104 PATJQ8NI35 1801 aa25.34■■□□□ 1.65
VRK2-202ENST00000412104 F8W810 466 aa25.33■■□□□ 1.65
VRK2-202ENST00000412104 DCLK1O15075 740 aa25.33■■□□□ 1.65
VRK2-202ENST00000412104 INPPL1O15357 1258 aa25.33■■□□□ 1.65
VRK2-202ENST00000412104 OAS1P00973 400 aaKnown RBP25.33■■□□□ 1.65
VRK2-202ENST00000412104 CKBP12277 381 aa25.33■■□□□ 1.65
VRK2-202ENST00000412104 PAX3P23760 479 aa25.33■■□□□ 1.65
VRK2-202ENST00000412104 FOXN2P32314 431 aa25.33■■□□□ 1.65
VRK2-202ENST00000412104 PDK1Q15118 436 aa25.33■■□□□ 1.65
VRK2-202ENST00000412104 IRGQQ8WZA9 623 aa25.33■■□□□ 1.65
VRK2-202ENST00000412104 GLUD2P49448 558 aa25.33■■□□□ 1.65
VRK2-202ENST00000412104 AP1B1Q10567 949 aa25.33■■□□□ 1.65
VRK2-202ENST00000412104 SPARCL1Q14515 664 aa25.33■■□□□ 1.65
VRK2-202ENST00000412104 ZKSCAN8Q15776 578 aaPredicted RBP25.33■■□□□ 1.65
VRK2-202ENST00000412104 DCLRE1AQ6PJP8 1040 aa25.33■■□□□ 1.65
VRK2-202ENST00000412104 LRRTM3Q86VH5 581 aa25.33■■□□□ 1.65
VRK2-202ENST00000412104 SUSD3Q96L08 255 aa25.33■■□□□ 1.65
VRK2-202ENST00000412104 PLAC1Q9HBJ0 212 aa25.33■■□□□ 1.65
VRK2-202ENST00000412104 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.33■■□□□ 1.65
VRK2-202ENST00000412104 RNF103O00237 685 aa25.32■■□□□ 1.64
VRK2-202ENST00000412104 C1QAP02745 245 aa25.32■■□□□ 1.64
VRK2-202ENST00000412104 TAC1P20366 129 aa25.32■■□□□ 1.64
VRK2-202ENST00000412104 FDFT1P37268 417 aa25.32■■□□□ 1.64
VRK2-202ENST00000412104 PM20D1Q6GTS8 502 aa25.32■■□□□ 1.64
VRK2-202ENST00000412104 PRPF39Q86UA1 669 aaKnown RBP25.32■■□□□ 1.64
VRK2-202ENST00000412104 P2RY11Q96G91 374 aa25.32■■□□□ 1.64
VRK2-202ENST00000412104 GLT1D1Q96MS3 346 aa25.32■■□□□ 1.64
VRK2-202ENST00000412104 COLEC11Q9BWP8 271 aa25.32■■□□□ 1.64
VRK2-202ENST00000412104 RASSF4Q9H2L5 321 aa25.32■■□□□ 1.64
VRK2-202ENST00000412104 IKBKGQ9Y6K9 419 aa25.32■■□□□ 1.64
VRK2-202ENST00000412104 PPP1R12AO14974 1030 aaPredicted RBP25.31■■□□□ 1.64
VRK2-202ENST00000412104 STK10O94804 968 aaKnown RBP25.31■■□□□ 1.64
VRK2-202ENST00000412104 CPP00450 1065 aa25.31■■□□□ 1.64
VRK2-202ENST00000412104 GBP2P32456 591 aaPredicted RBP25.31■■□□□ 1.64
VRK2-202ENST00000412104 TPI1P60174 286 aa25.31■■□□□ 1.64
VRK2-202ENST00000412104 TRAF7Q6Q0C0 670 aa25.31■■□□□ 1.64
VRK2-202ENST00000412104 THEM5Q8N1Q8 247 aa25.31■■□□□ 1.64
VRK2-202ENST00000412104 CD99L2Q8TCZ2 262 aa25.31■■□□□ 1.64
VRK2-202ENST00000412104 SIGLEC10Q96LC7 697 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms