RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 CYP2C9P11712 490 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 TSHRP16473 764 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 DIO1P49895 249 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 ENTPD1P49961 510 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 GAS1P54826 345 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 STK3Q13188 491 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 DDX10Q13206 875 aaKnown RBP2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 ZRSR2Q15696 482 aaKnown RBP2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 PFKFB3Q16875 520 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 FAM110CQ1W6H9 321 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 MGAT5BQ3V5L5 792 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 ERAP2Q6P179 960 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 RFX8Q6ZV50 586 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 RNF152Q8N8N0 203 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 TMEM171Q8WVE6 324 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 MAML1Q92585 1016 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 FRAT1Q92837 279 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 TRIM43Q96BQ3 446 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 ZNF518BQ9C0D4 1074 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 WDR12Q9GZL7 423 aaKnown RBP2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 CERS4Q9HA82 394 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 SMURF2Q9HAU4 748 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 RRAGDQ9NQL2 400 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 MGAT4CQ9UBM8 478 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 COG5Q9UP83 839 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 LRCH1Q9Y2L9 728 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 TMX2Q9Y320 296 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 PEG3Q9GZU2 1588 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 WDR97A6NE52 1622 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 KIF21BO75037 1637 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 SOGA1O94964 1423 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 SMG6Q86US8 1419 aaKnown RBP2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 BAZ1BQ9UIG0 1483 aaKnown RBP2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 A0A087WYN8 130 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 TMEM272A0A1B0GTI8 110 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 A0A1W2PPC4 97 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 F5H423 210 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 F8W8V4 182 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 CLIC1O00299 241 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 INPPL1O15357 1258 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 ANP32CO43423 234 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 NCK2O43639 380 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 CREB3O43889 395 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 ZNF432O94892 652 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 XRCC6P12956 609 aaKnown RBP eCLIP2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 CREB1P16220 341 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 KCNA3P22001 575 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 ARRB2P32121 409 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 PPM1AP35813 382 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 DGKEP52429 567 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 LTBQ06643 244 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 SLC13A2Q13183 592 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 RAB32Q13637 225 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 KEAP1Q14145 624 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 ZIK1Q3SY52 487 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 KRT71Q3SY84 523 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 C3orf38Q5JPI3 329 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 DCAF12L1Q5VU92 463 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 LMBRD2Q68DH5 695 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 HIBCHQ6NVY1 386 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 SKAP1Q86WV1 359 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 MICU3Q86XE3 530 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 MYLK4Q86YV6 388 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 LINC01465Q8N7H1 131 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 ATP11CQ8NB49 1132 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 VPS37AQ8NEZ2 397 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 IGFBPL1Q8WX77 278 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 PPP2R3CQ969Q6 453 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 MIB2Q96AX9 1013 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 TUBB6Q9BUF5 446 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 PLSCR4Q9NRQ2 329 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 SACM1LQ9NTJ5 587 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 ZBED9Q6R2W3 1325 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 ABCC8Q09428 1581 aa2.86□□□□□ -1.95
HMGB3P2-201ENST00000411913 A0A087WWL8 130 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 MBD3L4A6NDZ8 208 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 MBD3L3A6NE82 208 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 M0R3H8 397 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 TCERG1O14776 1098 aaKnown RBP2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 APOL1O14791 398 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 SOCS5O75159 536 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 CGAP01215 116 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 ANXA2P07355 339 aaKnown RBP2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 ABCB4P21439 1286 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 TBXAS1P24557 533 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 MLH1P40692 756 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 TRAPPC10P48553 1259 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 SLC11A2P49281 568 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 UCP3P55916 312 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 P2RX3P56373 397 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 RPS16P62249 146 aaKnown RBP2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 TNFAIP2Q03169 654 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 SLC14A1Q13336 389 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 CTBP1Q13363 440 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 PTGR1Q14914 329 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 MFSD13AQ14CX5 517 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 ARL13BQ3SXY8 428 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 INO80DQ53TQ3 878 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 EARS2Q5JPH6 523 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms