RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 TEX13CA0A0J9YWL9 993 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 E2F3O00716 465 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 CYP3A4P08684 503 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 GSTT2BP0CG30 244 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 CCNE1P24864 410 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SLC1A2P43004 574 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 CD97P48960 835 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 RGS19P49795 217 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 RPL14P50914 215 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SP4Q02446 784 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 PPIL2Q13356 520 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 KCNA10Q16322 511 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 HKDC1Q2TB90 917 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 FAM47CQ5HY64 1035 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 CNKSR3Q6P9H4 555 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 RRAGAQ7L523 313 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF677Q86XU0 584 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 MPP5Q8N3R9 675 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 MB21D1Q8N884 522 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 UTP15Q8TED0 518 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SLC7A3Q8WY07 619 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 AP1M1Q9BXS5 423 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 FOXP1Q9H334 677 aaPredicted RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 NECTIN3Q9NQS3 549 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 NRBP2Q9NSY0 501 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SAGE1Q9NXZ1 904 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 VNN3Q9NY84 501 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 COX16Q9P0S2 106 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SEPT9Q9UHD8 586 aaPredicted RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 STARD13Q9Y3M8 1113 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 HEBP2Q9Y5Z4 205 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SYNJ2BP-COX16A0A087WUM0 186 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 A0A088AWK7 358 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 TM7SF2O76062 418 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 HSMCR30P0CW71 290 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 EPB42P16452 691 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 GNB3P16520 340 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF10P21506 573 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 F8A1P23610 371 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 PRPH2P23942 346 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 CMA1P23946 247 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 CRABP2P29373 138 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 AP2S1P53680 142 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 OXCT1P55809 520 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 USP41Q3LFD5 358 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 FAM196AQ6ZSG2 479 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 MIGA2Q7L4E1 593 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 GAS2L3Q86XJ1 694 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 C2CD5Q86YS7 1000 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 PPIL6Q8IXY8 311 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF283Q8N7M2 679 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 STARD8Q92502 1023 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 FGGYQ96C11 551 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 SIPA1Q96FS4 1042 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 SLC12A5Q9H2X9 1139 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 AFF4Q9UHB7 1163 aaKnown RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 RABL2BQ9UNT1 228 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 ERVK-11Q9UQG0 969 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 PLEKHA6Q9Y2H5 1048 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 CRYL1Q9Y2S2 319 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 PCDHGA10Q9Y5H3 936 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 ST20-MTHFSA0A0A6YYL1 179 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 BCAR3O75815 825 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 KCNK5O95279 499 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 GDF11O95390 407 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 LDLRP01130 860 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 H2AFZP0C0S5 128 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 EIF4A3P38919 411 aaKnown RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 PLA2G4AP47712 749 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 RNF144AP50876 292 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 PKNOX1P55347 436 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 DCAF4L1Q3SXM0 396 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 DNAJC24Q6P3W2 148 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 H2AFVQ71UI9 128 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 OAFQ86UD1 273 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 AKAP14Q86UN6 197 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 EID3Q8N140 333 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF786Q8N393 782 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 NXPE2Q96DL1 559 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 DHRS1Q96LJ7 313 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 OR14A2Q96R54 314 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 PELOQ9BRX2 385 aaKnown RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 OR10A4Q9H209 315 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 SP110Q9HB58 689 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 AS3MTQ9HBK9 375 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 ENTPD7Q9NQZ7 604 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 TMEM45AQ9NWC5 275 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 NDUFAF4Q9P032 175 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 KLHL8Q9P2G9 620 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 REV1Q9UBZ9 1251 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 TRPS1Q9UHF7 1281 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 EVLQ9UI08 416 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 PPIEQ9UNP9 301 aaKnown RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 POLR3HQ9Y535 204 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 POMT1Q9Y6A1 747 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 WASF2Q9Y6W5 498 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 STK36Q9NRP7 1315 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 KLF18A0A0U1RQI7 1052 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 FARS2O95363 451 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms