RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 DYNC1LI1Q9Y6G9 523 aaKnown RBP-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 CFAP46Q8IYW2 2715 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF407Q9C0G0 2248 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 ALPK2Q86TB3 2170 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 COL4A1P02462 1669 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 GVINP1Q7Z2Y8 2422 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 CNOT1A5YKK6 2376 aaKnown RBP-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 ZMYM3Q14202 1370 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 FREM1Q5H8C1 2179 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 A0A096LPK6 155 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 A0A0B4J269 797 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 PRAMEF33A0A0G2JMD5 474 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 FAM149AA5PLN7 773 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 RBMY1BA6NDE4 496 aaKnown RBP-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 RBMY1EA6NEQ0 496 aaKnown RBP-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 FOXO6A8MYZ6 492 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 KCNN4O15554 427 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 PI15O43692 258 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 TLX3O43711 291 aaPredicted RBP-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 PRAMEF10O60809 474 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 FSBPO95073 299 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 AIFM1O95831 613 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 RBMY1DP0C7P1 496 aaKnown RBP-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 ANXA7P20073 488 aaKnown RBP-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 GDF1P27539 372 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 PCGF2P35227 344 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 SPRR2AP35326 72 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 ALDH9A1P49189 494 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 FMO1Q01740 532 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 LMNB2Q03252 620 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 DSC1Q08554 894 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 SREBF2Q12772 1141 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 PLD1Q13393 1074 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 UNC119Q13432 240 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 PLCB4Q15147 1175 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 LY6EQ16553 131 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 TAF9Q16594 264 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 ACCSLQ4AC99 568 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 Q5BKY6 102 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 FCRLAQ7L513 359 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 TAOK1Q7L7X3 1001 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 IQCHQ86VS3 1027 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 PPIL6Q8IXY8 311 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 PRR22Q8IZ63 422 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 TMEM61Q8N0U2 210 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 CRACR2BQ8N4Y2 399 aaPredicted RBP-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 CDYL2Q8N8U2 506 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 HIPK4Q8NE63 616 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 SH3RF2Q8TEC5 729 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 BTN2A2Q8WVV5 523 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 ROBO4Q8WZ75 1007 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 LPAR1Q92633 364 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 AKAP1Q92667 903 aaKnown RBP eCLIP-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 FKBP10Q96AY3 582 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 ALKBH8Q96BT7 664 aaKnown RBP-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 BCANQ96GW7 911 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 ART5Q96L15 291 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 ZNF354BQ96LW1 612 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 LENG8Q96PV6 779 aaPredicted RBP-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 CITED4Q96RK1 184 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 KCNJ15Q99712 375 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 MCRIP2Q9BUT9 160 aaKnown RBP-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 MTMR12Q9C0I1 747 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 B3GNT4Q9C0J1 378 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 SLITRK2Q9H156 845 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 WNT8AQ9H1J5 351 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 CLK4Q9HAZ1 481 aaKnown RBP-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 SAMSN1Q9NSI8 373 aaKnown RBP-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 DUS2Q9NX74 493 aaKnown RBP-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 KCMF1Q9P0J7 381 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 HSFX1Q9UBD0 423 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 DKK3Q9UBP4 350 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 KLK12Q9UKR0 248 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 SRPK3Q9UPE1 567 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 CDK11AQ9UQ88 783 aaPredicted RBP-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 AKT3Q9Y243 479 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 B3GNT3Q9Y2A9 372 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 SIK3Q9Y2K2 1263 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 ATP23Q9Y6H3 246 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 KIF26AQ9ULI4 1882 aaPredicted RBP-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 CMYA5Q8N3K9 4069 aa-1.29□□□□□ -2.62
RNU4-88P-201ENST00000411220 FAM205AQ6ZU69 1335 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 PRAC2D3DTV9 90 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 MCIDASD6RGH6 385 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 KIAA0391O15091 583 aaKnown RBP-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 HDAC3O15379 428 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 ZSCAN12O43309 604 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 SPRY3O43610 288 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 ZNF806P0C7X5 589 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 GAAP10253 952 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 CPA1P15085 419 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 MYOD1P15172 320 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 ZNF44P15621 663 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 TSHRP16473 764 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 CD72P21854 359 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 UBA1P22314 1058 aaKnown RBP-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 ARSEP51690 589 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 CLRN1P58418 232 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 CNTN2Q02246 1040 aa-1.3□□□□□ -2.62
RNU4-88P-201ENST00000411220 STIM1Q13586 685 aa-1.3□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms